RNA–Protein interactions for RNA: ENST00000468874.2

TMEM50B-206, Transcript of transmembrane protein 50B, humanhuman

TSL 5

Gene TMEM50B, Length 724 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-206ENST00000468874 ZNF316A6NFI3 1004 aaPredicted RBP12.25□□□□□ -0.45
TMEM50B-206ENST00000468874 TBC1D12O60347 775 aa12.25□□□□□ -0.45
TMEM50B-206ENST00000468874 ABCA8O94911 1581 aa12.25□□□□□ -0.45
TMEM50B-206ENST00000468874 VARS2Q5ST30 1063 aaKnown RBP12.23□□□□□ -0.45
TMEM50B-206ENST00000468874 RIMS1Q86UR5 1692 aaKnown RBP12.22□□□□□ -0.45
TMEM50B-206ENST00000468874 FANCAO15360 1455 aa12.21□□□□□ -0.45
TMEM50B-206ENST00000468874 ABCA9Q8IUA7 1624 aa12.21□□□□□ -0.46
TMEM50B-206ENST00000468874 AKNAQ7Z591 1439 aa12.2□□□□□ -0.46
TMEM50B-206ENST00000468874 LHX6Q9UPM6 363 aa12.2□□□□□ -0.46
TMEM50B-206ENST00000468874 ZNF687Q8N1G0 1237 aa12.19□□□□□ -0.46
TMEM50B-206ENST00000468874 UPF1Q92900 1129 aaKnown RBP eCLIP12.19□□□□□ -0.46
TMEM50B-206ENST00000468874 DENND4BO75064 1496 aaPredicted RBP12.19□□□□□ -0.46
TMEM50B-206ENST00000468874 ATP10BO94823 1461 aa12.19□□□□□ -0.46
TMEM50B-206ENST00000468874 IQSEC2Q5JU85 1478 aa12.19□□□□□ -0.46
TMEM50B-206ENST00000468874 CAMK2BQ13554 666 aa12.18□□□□□ -0.46
TMEM50B-206ENST00000468874 FHOD3Q2V2M9 1422 aa12.18□□□□□ -0.46
TMEM50B-206ENST00000468874 ARHGEF40Q8TER5 1519 aa12.17□□□□□ -0.46
TMEM50B-206ENST00000468874 EMILIN3Q9NT22 766 aa12.17□□□□□ -0.46
TMEM50B-206ENST00000468874 PTPRTO14522 1441 aa12.17□□□□□ -0.46
TMEM50B-206ENST00000468874 FRMPD1Q5SYB0 1578 aa12.17□□□□□ -0.46
TMEM50B-206ENST00000468874 MAGI2Q86UL8 1455 aa12.16□□□□□ -0.46
TMEM50B-206ENST00000468874 KRTAP3-3Q9BYR6 98 aa12.16□□□□□ -0.46
TMEM50B-206ENST00000468874 KRTAP3-2Q9BYR7 98 aa12.16□□□□□ -0.46
TMEM50B-206ENST00000468874 MLECQ14165 292 aa12.14□□□□□ -0.47
TMEM50B-206ENST00000468874 TTC37Q6PGP7 1564 aa12.13□□□□□ -0.47
TMEM50B-206ENST00000468874 PSDA5PKW4 1024 aaPredicted RBP12.13□□□□□ -0.47
TMEM50B-206ENST00000468874 ARID3CA6NKF2 412 aa12.13□□□□□ -0.47
TMEM50B-206ENST00000468874 TSHZ2Q9NRE2 1034 aa12.13□□□□□ -0.47
TMEM50B-206ENST00000468874 UHRF1BP1Q6BDS2 1440 aa12.12□□□□□ -0.47
TMEM50B-206ENST00000468874 EFCAB5A4FU69 1503 aa12.12□□□□□ -0.47
TMEM50B-206ENST00000468874 ANO8Q9HCE9 1232 aaPredicted RBP12.12□□□□□ -0.47
TMEM50B-206ENST00000468874 PLSCR2Q9NRY7 297 aa12.12□□□□□ -0.47
TMEM50B-206ENST00000468874 PREX1Q8TCU6 1659 aa12.12□□□□□ -0.47
TMEM50B-206ENST00000468874 MAP3K9P80192 1104 aa12.11□□□□□ -0.47
TMEM50B-206ENST00000468874 PLCB2Q00722 1185 aa12.11□□□□□ -0.47
TMEM50B-206ENST00000468874 ZMYM4Q5VZL5 1548 aa12.1□□□□□ -0.47
TMEM50B-206ENST00000468874 ZFYVE16Q7Z3T8 1539 aa12.1□□□□□ -0.47
TMEM50B-206ENST00000468874 PLEKHD1A6NEE1 506 aa12.09□□□□□ -0.47
TMEM50B-206ENST00000468874 EVI5O60447 810 aa12.09□□□□□ -0.47
TMEM50B-206ENST00000468874 STRCQ7RTU9 1775 aa12.09□□□□□ -0.47
TMEM50B-206ENST00000468874 CEBPAP49715 358 aaPredicted RBP12.08□□□□□ -0.48
TMEM50B-206ENST00000468874 WDR70Q9NW82 654 aa12.08□□□□□ -0.48
TMEM50B-206ENST00000468874 LTBP4Q8N2S1 1624 aa12.08□□□□□ -0.48
TMEM50B-206ENST00000468874 ARHGEF12Q9NZN5 1544 aa12.07□□□□□ -0.48
TMEM50B-206ENST00000468874 RICTORQ6R327 1708 aa12.07□□□□□ -0.48
TMEM50B-206ENST00000468874 FER1L4A9Z1Z3 1794 aa12.07□□□□□ -0.48
TMEM50B-206ENST00000468874 CFAP74Q9C0B2 1584 aa12.06□□□□□ -0.48
TMEM50B-206ENST00000468874 UBAP1LF5GYI3 381 aa12.06□□□□□ -0.48
TMEM50B-206ENST00000468874 ATP10AO60312 1499 aa12.06□□□□□ -0.48
TMEM50B-206ENST00000468874 CTTNBP2Q8WZ74 1663 aa12.06□□□□□ -0.48
TMEM50B-206ENST00000468874 E2F4Q16254 413 aa12.05□□□□□ -0.48
TMEM50B-206ENST00000468874 PBX2P40425 430 aa12.04□□□□□ -0.48
TMEM50B-206ENST00000468874 POTEEQ6S8J3 1075 aa12.04□□□□□ -0.48
TMEM50B-206ENST00000468874 P3H3Q8IVL6 736 aa12.04□□□□□ -0.48
TMEM50B-206ENST00000468874 SETD1BQ9UPS6 1966 aaKnown RBP12.04□□□□□ -0.48
TMEM50B-206ENST00000468874 C9orf84Q5VXU9 1444 aa12.03□□□□□ -0.48
TMEM50B-206ENST00000468874 PPP4R3BQ5MIZ7 849 aa12.03□□□□□ -0.48
TMEM50B-206ENST00000468874 SPNS2Q8IVW8 549 aa12.03□□□□□ -0.48
TMEM50B-206ENST00000468874 DPYSL4O14531 572 aa12.02□□□□□ -0.49
TMEM50B-206ENST00000468874 ARIH1Q9Y4X5 557 aaPredicted RBP12.02□□□□□ -0.49
TMEM50B-206ENST00000468874 FOSBP53539 338 aa12.01□□□□□ -0.49
TMEM50B-206ENST00000468874 ESF1Q9H501 851 aaKnown RBP12.01□□□□□ -0.49
TMEM50B-206ENST00000468874 SCAPERQ9BY12 1400 aa12.01□□□□□ -0.49
TMEM50B-206ENST00000468874 HECW1Q76N89 1606 aa12□□□□□ -0.49
TMEM50B-206ENST00000468874 TRAPPC8Q9Y2L5 1435 aa12□□□□□ -0.49
TMEM50B-206ENST00000468874 SIGLEC1Q9BZZ2 1709 aa12□□□□□ -0.49
TMEM50B-206ENST00000468874 ZNF454Q8N9F8 522 aa11.99□□□□□ -0.49
TMEM50B-206ENST00000468874 RAPGEF6Q8TEU7 1601 aa11.99□□□□□ -0.49
TMEM50B-206ENST00000468874 NCOA1Q15788 1441 aa11.98□□□□□ -0.49
TMEM50B-206ENST00000468874 ARHGAP33O14559 1287 aa11.98□□□□□ -0.49
TMEM50B-206ENST00000468874 PRXQ9BXM0 1461 aa11.97□□□□□ -0.49
TMEM50B-206ENST00000468874 EFCAB2Q5VUJ9 269 aa11.97□□□□□ -0.49
TMEM50B-206ENST00000468874 AXIN2Q9Y2T1 843 aa11.97□□□□□ -0.49
TMEM50B-206ENST00000468874 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.96□□□□□ -0.49
TMEM50B-206ENST00000468874 NUP153P49790 1475 aaKnown RBP11.96□□□□□ -0.49
TMEM50B-206ENST00000468874 PLCH2O75038 1416 aa11.96□□□□□ -0.49
TMEM50B-206ENST00000468874 LSM11P83369 360 aaKnown RBP eCLIP11.96□□□□□ -0.49
TMEM50B-206ENST00000468874 TOM1O60784 492 aa11.95□□□□□ -0.5
TMEM50B-206ENST00000468874 PTGER2P43116 358 aa11.95□□□□□ -0.5
TMEM50B-206ENST00000468874 PDIA6Q15084 440 aa11.95□□□□□ -0.5
TMEM50B-206ENST00000468874 SPDYE16A6NNV3 312 aaPredicted RBP11.94□□□□□ -0.5
TMEM50B-206ENST00000468874 HSPA1LP34931 641 aa11.94□□□□□ -0.5
TMEM50B-206ENST00000468874 BCL2L12Q9HB09 334 aa11.94□□□□□ -0.5
TMEM50B-206ENST00000468874 MED1Q15648 1581 aaPredicted RBP11.93□□□□□ -0.5
TMEM50B-206ENST00000468874 ZNF335Q9H4Z2 1342 aaPredicted RBP11.93□□□□□ -0.5
TMEM50B-206ENST00000468874 PHF14O94880 888 aa11.93□□□□□ -0.5
TMEM50B-206ENST00000468874 MMRN1Q13201 1228 aa11.93□□□□□ -0.5
TMEM50B-206ENST00000468874 ZDHHC16Q969W1 377 aa11.93□□□□□ -0.5
TMEM50B-206ENST00000468874 PCDHGA10Q9Y5H3 936 aa11.93□□□□□ -0.5
TMEM50B-206ENST00000468874 ANKRD13DQ6ZTN6 518 aa11.92□□□□□ -0.5
TMEM50B-206ENST00000468874 CNTLNQ9NXG0 1405 aa11.92□□□□□ -0.5
TMEM50B-206ENST00000468874 ZNF518AQ6AHZ1 1483 aa11.91□□□□□ -0.5
TMEM50B-206ENST00000468874 PSEN2P49810 448 aa11.91□□□□□ -0.5
TMEM50B-206ENST00000468874 MYT1LQ9UL68 1186 aa11.91□□□□□ -0.5
TMEM50B-206ENST00000468874 NPATQ14207 1427 aa11.91□□□□□ -0.5
TMEM50B-206ENST00000468874 SAMD9Q5K651 1589 aa11.91□□□□□ -0.5
TMEM50B-206ENST00000468874 ADAM33Q9BZ11 813 aa11.9□□□□□ -0.5
TMEM50B-206ENST00000468874 REREQ9P2R6 1566 aa11.89□□□□□ -0.51
TMEM50B-206ENST00000468874 DMRTA1Q5VZB9 504 aa11.89□□□□□ -0.51
TMEM50B-206ENST00000468874 AFAP1Q8N556 730 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms