RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 PPP1R15AO75807 674 aaPredicted RBP33.09■■■□□ 2.89
TTC28-204ENST00000468807 TMEM131LA2VDJ0 1609 aa33.08■■■□□ 2.89
TTC28-204ENST00000468807 ALKQ9UM73 1620 aa33.07■■■□□ 2.88
TTC28-204ENST00000468807 RIMS2Q9UQ26 1411 aa33.06■■■□□ 2.88
TTC28-204ENST00000468807 HDGFP51858 240 aaKnown RBP33.03■■■□□ 2.88
TTC28-204ENST00000468807 ZFYVE9O95405 1425 aa33.02■■■□□ 2.88
TTC28-204ENST00000468807 XIRP1Q702N8 1843 aaKnown RBP33.02■■■□□ 2.88
TTC28-204ENST00000468807 KCNA6P17658 529 aa33.01■■■□□ 2.87
TTC28-204ENST00000468807 PLEKHG1Q9ULL1 1385 aa32.98■■■□□ 2.87
TTC28-204ENST00000468807 NUTM2DQ5VT03 806 aaPredicted RBP32.98■■■□□ 2.87
TTC28-204ENST00000468807 ILDR2Q71H61 639 aa32.97■■■□□ 2.87
TTC28-204ENST00000468807 PROSER2Q86WR7 435 aaPredicted RBP32.96■■■□□ 2.87
TTC28-204ENST00000468807 TMEM94Q12767 1356 aa32.96■■■□□ 2.87
TTC28-204ENST00000468807 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.95■■■□□ 2.87
TTC28-204ENST00000468807 RBM33Q96EV2 1170 aaKnown RBP32.95■■■□□ 2.87
TTC28-204ENST00000468807 SPHKAPQ2M3C7 1700 aa32.94■■■□□ 2.86
TTC28-204ENST00000468807 NAIPQ13075 1403 aa32.94■■■□□ 2.86
TTC28-204ENST00000468807 NWD1Q149M9 1564 aa32.91■■■□□ 2.86
TTC28-204ENST00000468807 NKTRP30414 1462 aaKnown RBP32.89■■■□□ 2.86
TTC28-204ENST00000468807 TRIM52Q96A61 297 aa32.86■■■□□ 2.85
TTC28-204ENST00000468807 CHD2O14647 1828 aaKnown RBP32.86■■■□□ 2.85
TTC28-204ENST00000468807 ZNF326Q5BKZ1 582 aaKnown RBP32.84■■■□□ 2.85
TTC28-204ENST00000468807 TBX22Q9Y458 520 aa32.84■■■□□ 2.85
TTC28-204ENST00000468807 MED1Q15648 1581 aaPredicted RBP32.83■■■□□ 2.85
TTC28-204ENST00000468807 HFM1A2PYH4 1435 aa32.82■■■□□ 2.84
TTC28-204ENST00000468807 ADAMTS13Q76LX8 1427 aa32.8■■■□□ 2.84
TTC28-204ENST00000468807 MSH6P52701 1360 aa32.8■■■□□ 2.84
TTC28-204ENST00000468807 DIP2AQ14689 1571 aa32.79■■■□□ 2.84
TTC28-204ENST00000468807 CLTCL1P53675 1640 aa32.77■■■□□ 2.84
TTC28-204ENST00000468807 TRPM2O94759 1503 aa32.76■■■□□ 2.83
TTC28-204ENST00000468807 C14orf37Q86TY3 774 aa32.74■■■□□ 2.83
TTC28-204ENST00000468807 FAM135BQ49AJ0 1406 aa32.73■■■□□ 2.83
TTC28-204ENST00000468807 KIF1BO60333 1816 aa32.72■■■□□ 2.83
TTC28-204ENST00000468807 ROBO1Q9Y6N7 1651 aa32.72■■■□□ 2.83
TTC28-204ENST00000468807 SLC4A1APQ9BWU0 796 aaKnown RBP32.71■■■□□ 2.83
TTC28-204ENST00000468807 PIK3R4Q99570 1358 aa32.7■■■□□ 2.83
TTC28-204ENST00000468807 SOCS7O14512 581 aa32.7■■■□□ 2.83
TTC28-204ENST00000468807 PHF23Q9BUL5 403 aaPredicted RBP32.7■■■□□ 2.83
TTC28-204ENST00000468807 AMOTL2Q9Y2J4 779 aa32.66■■■□□ 2.82
TTC28-204ENST00000468807 NRXN3Q9Y4C0 1643 aa32.66■■■□□ 2.82
TTC28-204ENST00000468807 SLAIN2Q9P270 581 aa32.65■■■□□ 2.82
TTC28-204ENST00000468807 SETBP1Q9Y6X0 1596 aa32.65■■■□□ 2.82
TTC28-204ENST00000468807 NEXMIFQ5QGS0 1516 aa32.63■■■□□ 2.81
TTC28-204ENST00000468807 PTPRUQ92729 1446 aa32.62■■■□□ 2.81
TTC28-204ENST00000468807 NCOA3Q9Y6Q9 1424 aa32.61■■■□□ 2.81
TTC28-204ENST00000468807 FOXD1Q16676 465 aa32.58■■■□□ 2.81
TTC28-204ENST00000468807 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.57■■■□□ 2.81
TTC28-204ENST00000468807 ATF3P18847 181 aa32.57■■■□□ 2.8
TTC28-204ENST00000468807 C19orf44Q9H6X5 657 aa32.56■■■□□ 2.8
TTC28-204ENST00000468807 METP08581 1390 aa32.56■■■□□ 2.8
TTC28-204ENST00000468807 CADPS2Q86UW7 1296 aa32.55■■■□□ 2.8
TTC28-204ENST00000468807 PHLPP1O60346 1717 aa32.54■■■□□ 2.8
TTC28-204ENST00000468807 XRN1Q8IZH2 1706 aaKnown RBP32.54■■■□□ 2.8
TTC28-204ENST00000468807 VGFO15240 615 aaPredicted RBP32.5■■■□□ 2.79
TTC28-204ENST00000468807 MPHOSPH9Q99550 1183 aa32.47■■■□□ 2.79
TTC28-204ENST00000468807 RPGRIP1LQ68CZ1 1315 aa32.46■■■□□ 2.79
TTC28-204ENST00000468807 CCDC144AA2RUR9 1427 aa32.44■■■□□ 2.78
TTC28-204ENST00000468807 PPLO60437 1756 aa32.44■■■□□ 2.78
TTC28-204ENST00000468807 DCCP43146 1447 aa32.4■■■□□ 2.78
TTC28-204ENST00000468807 JCADQ9P266 1359 aa32.39■■■□□ 2.78
TTC28-204ENST00000468807 COL16A1Q07092 1604 aaPredicted RBP32.39■■■□□ 2.78
TTC28-204ENST00000468807 SETD1AO15047 1707 aaKnown RBP32.38■■■□□ 2.77
TTC28-204ENST00000468807 SETD5Q9C0A6 1442 aa32.38■■■□□ 2.77
TTC28-204ENST00000468807 RGL3Q3MIN7 710 aa32.38■■■□□ 2.77
TTC28-204ENST00000468807 BRINP3Q76B58 766 aa32.35■■■□□ 2.77
TTC28-204ENST00000468807 RGS17Q9UGC6 210 aaPredicted RBP32.35■■■□□ 2.77
TTC28-204ENST00000468807 ADGRL3Q9HAR2 1447 aa32.34■■■□□ 2.77
TTC28-204ENST00000468807 NALCNQ8IZF0 1738 aa32.34■■■□□ 2.77
TTC28-204ENST00000468807 AHDC1Q5TGY3 1603 aaPredicted RBP32.34■■■□□ 2.77
TTC28-204ENST00000468807 MST1RQ04912 1400 aa32.32■■■□□ 2.76
TTC28-204ENST00000468807 ACIN1Q9UKV3 1341 aaKnown RBP32.31■■■□□ 2.76
TTC28-204ENST00000468807 PTCH1Q13635 1447 aa32.3■■■□□ 2.76
TTC28-204ENST00000468807 ASXL1Q8IXJ9 1541 aa32.3■■■□□ 2.76
TTC28-204ENST00000468807 SPATA31E1Q6ZUB1 1445 aa32.29■■■□□ 2.76
TTC28-204ENST00000468807 ROBO2Q9HCK4 1378 aa32.29■■■□□ 2.76
TTC28-204ENST00000468807 ADGRF5Q8IZF2 1346 aa32.28■■■□□ 2.76
TTC28-204ENST00000468807 RAB3GAP2Q9H2M9 1393 aa32.27■■■□□ 2.76
TTC28-204ENST00000468807 IFT172Q9UG01 1749 aa32.26■■■□□ 2.75
TTC28-204ENST00000468807 ANKRD30BQ9BXX2 1392 aa32.24■■■□□ 2.75
TTC28-204ENST00000468807 MEX3CQ5U5Q3 659 aaKnown RBP32.23■■■□□ 2.75
TTC28-204ENST00000468807 SPATA31A6Q5VVP1 1343 aa32.23■■■□□ 2.75
TTC28-204ENST00000468807 SHPRHQ149N8 1683 aa32.22■■■□□ 2.75
TTC28-204ENST00000468807 POTEAQ6S8J7 498 aa32.21■■■□□ 2.75
TTC28-204ENST00000468807 NHSL1Q5SYE7 1610 aa32.2■■■□□ 2.75
TTC28-204ENST00000468807 DDX17Q92841 729 aaKnown RBP32.19■■■□□ 2.74
TTC28-204ENST00000468807 STK26Q9P289 416 aa32.19■■■□□ 2.74
TTC28-204ENST00000468807 LRP6O75581 1613 aa32.18■■■□□ 2.74
TTC28-204ENST00000468807 PRAG1Q86YV5 1406 aa32.18■■■□□ 2.74
TTC28-204ENST00000468807 C1orf167Q5SNV9 1468 aa32.17■■■□□ 2.74
TTC28-204ENST00000468807 NUTM2BA6NNL0 878 aaPredicted RBP32.15■■■□□ 2.74
TTC28-204ENST00000468807 NUTM2EB1AL46 878 aaPredicted RBP32.15■■■□□ 2.74
TTC28-204ENST00000468807 NUTM2AQ8IVF1 878 aaPredicted RBP32.15■■■□□ 2.74
TTC28-204ENST00000468807 PIK3C2GO75747 1445 aa32.13■■■□□ 2.73
TTC28-204ENST00000468807 TMEM132EQ6IEE7 984 aa32.13■■■□□ 2.73
TTC28-204ENST00000468807 LRRC59Q96AG4 307 aaKnown RBP32.11■■■□□ 2.73
TTC28-204ENST00000468807 ORAI2Q96SN7 254 aa32.1■■■□□ 2.73
TTC28-204ENST00000468807 LRPPRCP42704 1394 aaKnown RBP32.08■■■□□ 2.73
TTC28-204ENST00000468807 WAPLQ7Z5K2 1190 aa32.08■■■□□ 2.73
TTC28-204ENST00000468807 TECPR2O15040 1411 aa32.05■■■□□ 2.72
TTC28-204ENST00000468807 CDC42BPGQ6DT37 1551 aa32.05■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms