RNA–Protein interactions for RNA: ENST00000468777.5

PCCB-208, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene PCCB, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-208ENST00000468777 ZFYVE9O95405 1425 aa27.79■■■□□ 2.04
PCCB-208ENST00000468777 TXNDC2Q86VQ3 553 aa27.78■■■□□ 2.04
PCCB-208ENST00000468777 SENP3Q9H4L4 574 aaPredicted RBP27.78■■■□□ 2.04
PCCB-208ENST00000468777 NEURL4Q96JN8 1562 aa27.77■■■□□ 2.04
PCCB-208ENST00000468777 SCAF11Q99590 1463 aaKnown RBP27.77■■■□□ 2.04
PCCB-208ENST00000468777 EID1Q9Y6B2 187 aa27.76■■■□□ 2.03
PCCB-208ENST00000468777 NEXMIFQ5QGS0 1516 aa27.75■■■□□ 2.03
PCCB-208ENST00000468777 NEUROD1Q13562 356 aa27.74■■■□□ 2.03
PCCB-208ENST00000468777 PPP1R15AO75807 674 aaPredicted RBP27.72■■■□□ 2.03
PCCB-208ENST00000468777 CCER1Q8TC90 406 aaPredicted RBP27.71■■■□□ 2.03
PCCB-208ENST00000468777 PPLO60437 1756 aa27.71■■■□□ 2.03
PCCB-208ENST00000468777 IFT172Q9UG01 1749 aa27.68■■■□□ 2.02
PCCB-208ENST00000468777 NPHP4O75161 1426 aaPredicted RBP27.68■■■□□ 2.02
PCCB-208ENST00000468777 IQGAP1P46940 1657 aa27.68■■■□□ 2.02
PCCB-208ENST00000468777 MED14O60244 1454 aa27.68■■■□□ 2.02
PCCB-208ENST00000468777 HDGFP51858 240 aaKnown RBP27.68■■■□□ 2.02
PCCB-208ENST00000468777 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.68■■■□□ 2.02
PCCB-208ENST00000468777 RPGRIP1LQ68CZ1 1315 aa27.66■■■□□ 2.02
PCCB-208ENST00000468777 BCANQ96GW7 911 aa27.64■■■□□ 2.02
PCCB-208ENST00000468777 ZEB1P37275 1124 aaPredicted RBP27.63■■■□□ 2.01
PCCB-208ENST00000468777 PLEKHG1Q9ULL1 1385 aa27.62■■■□□ 2.01
PCCB-208ENST00000468777 DMRT2Q9Y5R5 561 aa27.61■■■□□ 2.01
PCCB-208ENST00000468777 DCAF11Q8TEB1 546 aa27.61■■■□□ 2.01
PCCB-208ENST00000468777 ADGRF5Q8IZF2 1346 aa27.61■■■□□ 2.01
PCCB-208ENST00000468777 VGFO15240 615 aaPredicted RBP27.6■■■□□ 2.01
PCCB-208ENST00000468777 SLC26A8Q96RN1 970 aa27.6■■■□□ 2.01
PCCB-208ENST00000468777 KDM2AQ9Y2K7 1162 aa27.6■■■□□ 2.01
PCCB-208ENST00000468777 NRXN3Q9Y4C0 1643 aa27.58■■■□□ 2.01
PCCB-208ENST00000468777 CLSPNQ9HAW4 1339 aa27.56■■■□□ 2
PCCB-208ENST00000468777 L3MBTL2Q969R5 705 aa27.56■■■□□ 2
PCCB-208ENST00000468777 ADAMTS13Q76LX8 1427 aa27.55■■■□□ 2
PCCB-208ENST00000468777 SETBP1Q9Y6X0 1596 aa27.55■■■□□ 2
PCCB-208ENST00000468777 MYOM2P54296 1465 aa27.54■■■□□ 2
PCCB-208ENST00000468777 TONSLQ96HA7 1378 aa27.52■■■□□ 2
PCCB-208ENST00000468777 PIK3C2GO75747 1445 aa27.51■■□□□ 1.99
PCCB-208ENST00000468777 NRXN1Q9ULB1 1477 aa27.5■■□□□ 1.99
PCCB-208ENST00000468777 ZNF335Q9H4Z2 1342 aaPredicted RBP27.49■■□□□ 1.99
PCCB-208ENST00000468777 ALKQ9UM73 1620 aa27.47■■□□□ 1.99
PCCB-208ENST00000468777 DIP2AQ14689 1571 aa27.46■■□□□ 1.99
PCCB-208ENST00000468777 SETD1AO15047 1707 aaKnown RBP27.46■■□□□ 1.99
PCCB-208ENST00000468777 TBX22Q9Y458 520 aa27.46■■□□□ 1.99
PCCB-208ENST00000468777 METP08581 1390 aa27.44■■□□□ 1.98
PCCB-208ENST00000468777 STRCP1A6NGW2 1772 aa27.43■■□□□ 1.98
PCCB-208ENST00000468777 CFAP70Q5T0N1 1121 aa27.42■■□□□ 1.98
PCCB-208ENST00000468777 STAC3Q96MF2 364 aa27.42■■□□□ 1.98
PCCB-208ENST00000468777 PRAG1Q86YV5 1406 aa27.41■■□□□ 1.98
PCCB-208ENST00000468777 CHD2O14647 1828 aaKnown RBP27.39■■□□□ 1.98
PCCB-208ENST00000468777 PTPRUQ92729 1446 aa27.39■■□□□ 1.97
PCCB-208ENST00000468777 C14orf93Q9H972 538 aaKnown RBP27.38■■□□□ 1.97
PCCB-208ENST00000468777 TMEM132EQ6IEE7 984 aa27.38■■□□□ 1.97
PCCB-208ENST00000468777 ASXL1Q8IXJ9 1541 aa27.37■■□□□ 1.97
PCCB-208ENST00000468777 LAMC1P11047 1609 aa27.37■■□□□ 1.97
PCCB-208ENST00000468777 LTBP4Q8N2S1 1624 aa27.36■■□□□ 1.97
PCCB-208ENST00000468777 KCNA6P17658 529 aa27.34■■□□□ 1.97
PCCB-208ENST00000468777 PIK3R4Q99570 1358 aa27.34■■□□□ 1.97
PCCB-208ENST00000468777 NWD1Q149M9 1564 aa27.34■■□□□ 1.97
PCCB-208ENST00000468777 NBPF8Q3BBV2 869 aa27.34■■□□□ 1.97
PCCB-208ENST00000468777 AMOTL2Q9Y2J4 779 aa27.33■■□□□ 1.97
PCCB-208ENST00000468777 XRN1Q8IZH2 1706 aaKnown RBP27.31■■□□□ 1.96
PCCB-208ENST00000468777 ADGRB1O14514 1584 aa27.3■■□□□ 1.96
PCCB-208ENST00000468777 NBPF1Q3BBV0 1214 aa27.3■■□□□ 1.96
PCCB-208ENST00000468777 RBM33Q96EV2 1170 aaKnown RBP27.3■■□□□ 1.96
PCCB-208ENST00000468777 STK26Q9P289 416 aa27.3■■□□□ 1.96
PCCB-208ENST00000468777 TIMELESSQ9UNS1 1208 aa27.29■■□□□ 1.96
PCCB-208ENST00000468777 KIAA1210Q9ULL0 1709 aa27.29■■□□□ 1.96
PCCB-208ENST00000468777 TRPM1Q7Z4N2 1603 aa27.29■■□□□ 1.96
PCCB-208ENST00000468777 CPS1P31327 1500 aa27.27■■□□□ 1.96
PCCB-208ENST00000468777 YTHDC2Q9H6S0 1430 aaKnown RBP27.26■■□□□ 1.95
PCCB-208ENST00000468777 NKTRP30414 1462 aaKnown RBP27.26■■□□□ 1.95
PCCB-208ENST00000468777 LRRC7Q96NW7 1537 aa27.25■■□□□ 1.95
PCCB-208ENST00000468777 PROSER2Q86WR7 435 aaPredicted RBP27.23■■□□□ 1.95
PCCB-208ENST00000468777 LRPPRCP42704 1394 aaKnown RBP27.23■■□□□ 1.95
PCCB-208ENST00000468777 ROBO2Q9HCK4 1378 aa27.22■■□□□ 1.95
PCCB-208ENST00000468777 XIRP1Q702N8 1843 aaKnown RBP27.21■■□□□ 1.95
PCCB-208ENST00000468777 ROCK2O75116 1388 aaKnown RBP27.21■■□□□ 1.95
PCCB-208ENST00000468777 TMEM94Q12767 1356 aa27.2■■□□□ 1.95
PCCB-208ENST00000468777 TRAK1Q9UPV9 953 aa27.2■■□□□ 1.94
PCCB-208ENST00000468777 KNDC1Q76NI1 1749 aa27.2■■□□□ 1.94
PCCB-208ENST00000468777 ABCC11Q96J66 1382 aa27.19■■□□□ 1.94
PCCB-208ENST00000468777 PTCH1Q13635 1447 aa27.18■■□□□ 1.94
PCCB-208ENST00000468777 RALGAPBQ86X10 1494 aa27.18■■□□□ 1.94
PCCB-208ENST00000468777 TECPR2O15040 1411 aa27.18■■□□□ 1.94
PCCB-208ENST00000468777 CERKQ8TCT0 537 aa27.17■■□□□ 1.94
PCCB-208ENST00000468777 WAPLQ7Z5K2 1190 aa27.16■■□□□ 1.94
PCCB-208ENST00000468777 PLEKHH1Q9ULM0 1364 aa27.15■■□□□ 1.94
PCCB-208ENST00000468777 ARHGEF28Q8N1W1 1705 aaKnown RBP27.13■■□□□ 1.93
PCCB-208ENST00000468777 SAFB2Q14151 953 aaKnown RBP eCLIP27.12■■□□□ 1.93
PCCB-208ENST00000468777 C14orf37Q86TY3 774 aa27.12■■□□□ 1.93
PCCB-208ENST00000468777 PRAM1Q96QH2 718 aa27.12■■□□□ 1.93
PCCB-208ENST00000468777 CARD11Q9BXL7 1154 aa27.11■■□□□ 1.93
PCCB-208ENST00000468777 GPRASP1Q5JY77 1395 aa27.11■■□□□ 1.93
PCCB-208ENST00000468777 DLC1Q96QB1 1528 aa27.1■■□□□ 1.93
PCCB-208ENST00000468777 NALCNQ8IZF0 1738 aa27.09■■□□□ 1.93
PCCB-208ENST00000468777 FAM135BQ49AJ0 1406 aa27.08■■□□□ 1.93
PCCB-208ENST00000468777 POGKQ9P215 609 aa27.07■■□□□ 1.92
PCCB-208ENST00000468777 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.07■■□□□ 1.92
PCCB-208ENST00000468777 SIRT1Q96EB6 747 aa27.04■■□□□ 1.92
PCCB-208ENST00000468777 IQSEC2Q5JU85 1478 aa27.04■■□□□ 1.92
PCCB-208ENST00000468777 ADGRL3Q9HAR2 1447 aa27.04■■□□□ 1.92
PCCB-208ENST00000468777 NCOA3Q9Y6Q9 1424 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms