RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 EID1Q9Y6B2 187 aa22■■□□□ 1.11
SNIP1-202ENST00000468040 NEXMIFQ5QGS0 1516 aa22■■□□□ 1.11
SNIP1-202ENST00000468040 HSPA2P54652 639 aa21.99■■□□□ 1.11
SNIP1-202ENST00000468040 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.99■■□□□ 1.11
SNIP1-202ENST00000468040 TONSLQ96HA7 1378 aa21.99■■□□□ 1.11
SNIP1-202ENST00000468040 ANKLE2Q86XL3 938 aa21.98■■□□□ 1.11
SNIP1-202ENST00000468040 SCAF11Q99590 1463 aaKnown RBP21.97■■□□□ 1.11
SNIP1-202ENST00000468040 PPLO60437 1756 aa21.97■■□□□ 1.11
SNIP1-202ENST00000468040 IFT172Q9UG01 1749 aa21.97■■□□□ 1.11
SNIP1-202ENST00000468040 TXNDC2Q86VQ3 553 aa21.96■■□□□ 1.11
SNIP1-202ENST00000468040 STAC3Q96MF2 364 aa21.96■■□□□ 1.11
SNIP1-202ENST00000468040 VGFO15240 615 aaPredicted RBP21.95■■□□□ 1.1
SNIP1-202ENST00000468040 PPP1R15AO75807 674 aaPredicted RBP21.95■■□□□ 1.1
SNIP1-202ENST00000468040 TIMELESSQ9UNS1 1208 aa21.95■■□□□ 1.1
SNIP1-202ENST00000468040 POLR1AO95602 1720 aaPredicted RBP21.94■■□□□ 1.1
SNIP1-202ENST00000468040 MYOM2P54296 1465 aa21.94■■□□□ 1.1
SNIP1-202ENST00000468040 DCAF11Q8TEB1 546 aa21.93■■□□□ 1.1
SNIP1-202ENST00000468040 L3MBTL2Q969R5 705 aa21.93■■□□□ 1.1
SNIP1-202ENST00000468040 LTKP29376 864 aa21.92■■□□□ 1.1
SNIP1-202ENST00000468040 MED14O60244 1454 aa21.9■■□□□ 1.1
SNIP1-202ENST00000468040 NUTM2DQ5VT03 806 aaPredicted RBP21.9■■□□□ 1.1
SNIP1-202ENST00000468040 PLEKHG1Q9ULL1 1385 aa21.89■■□□□ 1.1
SNIP1-202ENST00000468040 NCKAP5LQ9HCH0 1330 aa21.89■■□□□ 1.1
SNIP1-202ENST00000468040 KDM2AQ9Y2K7 1162 aa21.88■■□□□ 1.09
SNIP1-202ENST00000468040 STRCQ7RTU9 1775 aa21.88■■□□□ 1.09
SNIP1-202ENST00000468040 NPHP4O75161 1426 aaPredicted RBP21.88■■□□□ 1.09
SNIP1-202ENST00000468040 NRXN1Q9ULB1 1477 aa21.87■■□□□ 1.09
SNIP1-202ENST00000468040 ADGRF5Q8IZF2 1346 aa21.86■■□□□ 1.09
SNIP1-202ENST00000468040 SETBP1Q9Y6X0 1596 aa21.86■■□□□ 1.09
SNIP1-202ENST00000468040 IQGAP1P46940 1657 aa21.85■■□□□ 1.09
SNIP1-202ENST00000468040 PIK3C2GO75747 1445 aa21.85■■□□□ 1.09
SNIP1-202ENST00000468040 BCANQ96GW7 911 aa21.84■■□□□ 1.09
SNIP1-202ENST00000468040 DMRT2Q9Y5R5 561 aa21.83■■□□□ 1.09
SNIP1-202ENST00000468040 PRAG1Q86YV5 1406 aa21.82■■□□□ 1.08
SNIP1-202ENST00000468040 DIP2AQ14689 1571 aa21.81■■□□□ 1.08
SNIP1-202ENST00000468040 LAMC1P11047 1609 aa21.8■■□□□ 1.08
SNIP1-202ENST00000468040 NRXN3Q9Y4C0 1643 aa21.8■■□□□ 1.08
SNIP1-202ENST00000468040 ADAMTS13Q76LX8 1427 aa21.79■■□□□ 1.08
SNIP1-202ENST00000468040 ALKQ9UM73 1620 aa21.77■■□□□ 1.08
SNIP1-202ENST00000468040 SENP3Q9H4L4 574 aaPredicted RBP21.77■■□□□ 1.08
SNIP1-202ENST00000468040 TBX22Q9Y458 520 aa21.77■■□□□ 1.08
SNIP1-202ENST00000468040 SLC26A8Q96RN1 970 aa21.76■■□□□ 1.07
SNIP1-202ENST00000468040 C14orf93Q9H972 538 aaKnown RBP21.76■■□□□ 1.07
SNIP1-202ENST00000468040 KIAA1210Q9ULL0 1709 aa21.75■■□□□ 1.07
SNIP1-202ENST00000468040 SETD1AO15047 1707 aaKnown RBP21.74■■□□□ 1.07
SNIP1-202ENST00000468040 CFAP70Q5T0N1 1121 aa21.73■■□□□ 1.07
SNIP1-202ENST00000468040 PIK3R4Q99570 1358 aa21.73■■□□□ 1.07
SNIP1-202ENST00000468040 NBPF8Q3BBV2 869 aa21.72■■□□□ 1.07
SNIP1-202ENST00000468040 TRPM1Q7Z4N2 1603 aa21.71■■□□□ 1.07
SNIP1-202ENST00000468040 ZEB1P37275 1124 aaPredicted RBP21.71■■□□□ 1.07
SNIP1-202ENST00000468040 METP08581 1390 aa21.7■■□□□ 1.06
SNIP1-202ENST00000468040 RALGAPBQ86X10 1494 aa21.69■■□□□ 1.06
SNIP1-202ENST00000468040 ADGRB1O14514 1584 aa21.67■■□□□ 1.06
SNIP1-202ENST00000468040 ASXL1Q8IXJ9 1541 aa21.67■■□□□ 1.06
SNIP1-202ENST00000468040 ROCK2O75116 1388 aaKnown RBP21.66■■□□□ 1.06
SNIP1-202ENST00000468040 NBPF1Q3BBV0 1214 aa21.64■■□□□ 1.05
SNIP1-202ENST00000468040 TMEM132EQ6IEE7 984 aa21.64■■□□□ 1.05
SNIP1-202ENST00000468040 NWD1Q149M9 1564 aa21.64■■□□□ 1.05
SNIP1-202ENST00000468040 CHD2O14647 1828 aaKnown RBP21.64■■□□□ 1.05
SNIP1-202ENST00000468040 LRPPRCP42704 1394 aaKnown RBP21.63■■□□□ 1.05
SNIP1-202ENST00000468040 GPRASP1Q5JY77 1395 aa21.63■■□□□ 1.05
SNIP1-202ENST00000468040 KCNA6P17658 529 aa21.63■■□□□ 1.05
SNIP1-202ENST00000468040 YTHDC2Q9H6S0 1430 aaKnown RBP21.63■■□□□ 1.05
SNIP1-202ENST00000468040 PTPRUQ92729 1446 aa21.62■■□□□ 1.05
SNIP1-202ENST00000468040 XRN1Q8IZH2 1706 aaKnown RBP21.61■■□□□ 1.05
SNIP1-202ENST00000468040 AMOTL2Q9Y2J4 779 aa21.61■■□□□ 1.05
SNIP1-202ENST00000468040 ABCC11Q96J66 1382 aa21.61■■□□□ 1.05
SNIP1-202ENST00000468040 NKTRP30414 1462 aaKnown RBP21.6■■□□□ 1.05
SNIP1-202ENST00000468040 TECPR2O15040 1411 aa21.6■■□□□ 1.05
SNIP1-202ENST00000468040 KNDC1Q76NI1 1749 aa21.6■■□□□ 1.05
SNIP1-202ENST00000468040 ZNF335Q9H4Z2 1342 aaPredicted RBP21.59■■□□□ 1.05
SNIP1-202ENST00000468040 CARD11Q9BXL7 1154 aa21.59■■□□□ 1.05
SNIP1-202ENST00000468040 STK26Q9P289 416 aa21.58■■□□□ 1.05
SNIP1-202ENST00000468040 PTCH1Q13635 1447 aa21.57■■□□□ 1.04
SNIP1-202ENST00000468040 CPS1P31327 1500 aa21.57■■□□□ 1.04
SNIP1-202ENST00000468040 DLC1Q96QB1 1528 aa21.56■■□□□ 1.04
SNIP1-202ENST00000468040 STRCP1A6NGW2 1772 aa21.56■■□□□ 1.04
SNIP1-202ENST00000468040 TRAK1Q9UPV9 953 aa21.55■■□□□ 1.04
SNIP1-202ENST00000468040 EIF3AQ14152 1382 aaKnown RBP21.54■■□□□ 1.04
SNIP1-202ENST00000468040 SIRT1Q96EB6 747 aa21.54■■□□□ 1.04
SNIP1-202ENST00000468040 FAM135BQ49AJ0 1406 aa21.54■■□□□ 1.04
SNIP1-202ENST00000468040 ROBO2Q9HCK4 1378 aa21.52■■□□□ 1.04
SNIP1-202ENST00000468040 ARHGEF28Q8N1W1 1705 aaKnown RBP21.52■■□□□ 1.03
SNIP1-202ENST00000468040 LTBP4Q8N2S1 1624 aa21.51■■□□□ 1.03
SNIP1-202ENST00000468040 PROSER2Q86WR7 435 aaPredicted RBP21.5■■□□□ 1.03
SNIP1-202ENST00000468040 USP47Q96K76 1375 aa21.48■■□□□ 1.03
SNIP1-202ENST00000468040 PRAM1Q96QH2 718 aa21.48■■□□□ 1.03
SNIP1-202ENST00000468040 POGKQ9P215 609 aa21.48■■□□□ 1.03
SNIP1-202ENST00000468040 LRRC7Q96NW7 1537 aa21.48■■□□□ 1.03
SNIP1-202ENST00000468040 NCOA3Q9Y6Q9 1424 aa21.47■■□□□ 1.03
SNIP1-202ENST00000468040 CENPJQ9HC77 1338 aaPredicted RBP21.46■■□□□ 1.03
SNIP1-202ENST00000468040 TMEM94Q12767 1356 aa21.46■■□□□ 1.03
SNIP1-202ENST00000468040 WAPLQ7Z5K2 1190 aa21.45■■□□□ 1.02
SNIP1-202ENST00000468040 PLEKHH1Q9ULM0 1364 aa21.45■■□□□ 1.02
SNIP1-202ENST00000468040 EIF4G2P78344 907 aaKnown RBP eCLIP21.44■■□□□ 1.027e-6■□□□□ 9.1
SNIP1-202ENST00000468040 C14orf37Q86TY3 774 aa21.42■■□□□ 1.02
SNIP1-202ENST00000468040 QRICH2Q9H0J4 1663 aa21.42■■□□□ 1.02
SNIP1-202ENST00000468040 ADGRL3Q9HAR2 1447 aa21.41■■□□□ 1.02
SNIP1-202ENST00000468040 SAFB2Q14151 953 aaKnown RBP eCLIP21.41■■□□□ 1.02
SNIP1-202ENST00000468040 RBM33Q96EV2 1170 aaKnown RBP21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms