RNA–Protein interactions for RNA: ENST00000467854.1

CNTNAP3B-204, Transcript of contactin associated protein like 3B, humanhuman

TSL 3

Gene CNTNAP3B, Length 1,238 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-204ENST00000467854 CLSPNQ9HAW4 1339 aa32.62■■■□□ 2.81
CNTNAP3B-204ENST00000467854 RGL3Q3MIN7 710 aa32.62■■■□□ 2.81
CNTNAP3B-204ENST00000467854 SCAF11Q99590 1463 aaKnown RBP32.61■■■□□ 2.81
CNTNAP3B-204ENST00000467854 STRCQ7RTU9 1775 aa32.61■■■□□ 2.81
CNTNAP3B-204ENST00000467854 NEUROD1Q13562 356 aa32.61■■■□□ 2.81
CNTNAP3B-204ENST00000467854 LTKP29376 864 aa32.55■■■□□ 2.8
CNTNAP3B-204ENST00000467854 TXNDC2Q86VQ3 553 aa32.55■■■□□ 2.8
CNTNAP3B-204ENST00000467854 ANKLE2Q86XL3 938 aa32.55■■■□□ 2.8
CNTNAP3B-204ENST00000467854 EID1Q9Y6B2 187 aa32.55■■■□□ 2.8
CNTNAP3B-204ENST00000467854 RPGRIP1LQ68CZ1 1315 aa32.54■■■□□ 2.8
CNTNAP3B-204ENST00000467854 NCKAP5LQ9HCH0 1330 aa32.54■■■□□ 2.8
CNTNAP3B-204ENST00000467854 NUTM2DQ5VT03 806 aaPredicted RBP32.54■■■□□ 2.8
CNTNAP3B-204ENST00000467854 PPP1R15AO75807 674 aaPredicted RBP32.52■■■□□ 2.8
CNTNAP3B-204ENST00000467854 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.52■■■□□ 2.8
CNTNAP3B-204ENST00000467854 IQGAP1P46940 1657 aa32.51■■■□□ 2.79
CNTNAP3B-204ENST00000467854 HDGFP51858 240 aaKnown RBP32.5■■■□□ 2.79
CNTNAP3B-204ENST00000467854 MED14O60244 1454 aa32.49■■■□□ 2.79
CNTNAP3B-204ENST00000467854 MYOM2P54296 1465 aa32.48■■■□□ 2.79
CNTNAP3B-204ENST00000467854 NPHP4O75161 1426 aaPredicted RBP32.48■■■□□ 2.79
CNTNAP3B-204ENST00000467854 TONSLQ96HA7 1378 aa32.46■■■□□ 2.79
CNTNAP3B-204ENST00000467854 PLEKHG1Q9ULL1 1385 aa32.45■■■□□ 2.79
CNTNAP3B-204ENST00000467854 NRXN3Q9Y4C0 1643 aa32.44■■■□□ 2.78
CNTNAP3B-204ENST00000467854 DCAF11Q8TEB1 546 aa32.43■■■□□ 2.78
CNTNAP3B-204ENST00000467854 SENP3Q9H4L4 574 aaPredicted RBP32.43■■■□□ 2.78
CNTNAP3B-204ENST00000467854 SETBP1Q9Y6X0 1596 aa32.42■■■□□ 2.78
CNTNAP3B-204ENST00000467854 VGFO15240 615 aaPredicted RBP32.42■■■□□ 2.78
CNTNAP3B-204ENST00000467854 L3MBTL2Q969R5 705 aa32.41■■■□□ 2.78
CNTNAP3B-204ENST00000467854 ADGRF5Q8IZF2 1346 aa32.41■■■□□ 2.78
CNTNAP3B-204ENST00000467854 NRXN1Q9ULB1 1477 aa32.4■■■□□ 2.78
CNTNAP3B-204ENST00000467854 KDM2AQ9Y2K7 1162 aa32.38■■■□□ 2.77
CNTNAP3B-204ENST00000467854 PIK3C2GO75747 1445 aa32.37■■■□□ 2.77
CNTNAP3B-204ENST00000467854 BCANQ96GW7 911 aa32.37■■■□□ 2.77
CNTNAP3B-204ENST00000467854 DIP2AQ14689 1571 aa32.35■■■□□ 2.77
CNTNAP3B-204ENST00000467854 ADAMTS13Q76LX8 1427 aa32.34■■■□□ 2.77
CNTNAP3B-204ENST00000467854 SETD1AO15047 1707 aaKnown RBP32.33■■■□□ 2.77
CNTNAP3B-204ENST00000467854 STAC3Q96MF2 364 aa32.32■■■□□ 2.76
CNTNAP3B-204ENST00000467854 DMRT2Q9Y5R5 561 aa32.32■■■□□ 2.76
CNTNAP3B-204ENST00000467854 LAMC1P11047 1609 aa32.31■■■□□ 2.76
CNTNAP3B-204ENST00000467854 ALKQ9UM73 1620 aa32.31■■■□□ 2.76
CNTNAP3B-204ENST00000467854 SLC26A8Q96RN1 970 aa32.3■■■□□ 2.76
CNTNAP3B-204ENST00000467854 PRAG1Q86YV5 1406 aa32.29■■■□□ 2.76
CNTNAP3B-204ENST00000467854 TIMELESSQ9UNS1 1208 aa32.25■■■□□ 2.75
CNTNAP3B-204ENST00000467854 ASXL1Q8IXJ9 1541 aa32.22■■■□□ 2.75
CNTNAP3B-204ENST00000467854 KIAA1210Q9ULL0 1709 aa32.22■■■□□ 2.75
CNTNAP3B-204ENST00000467854 TBX22Q9Y458 520 aa32.21■■■□□ 2.75
CNTNAP3B-204ENST00000467854 TRPM1Q7Z4N2 1603 aa32.2■■■□□ 2.75
CNTNAP3B-204ENST00000467854 CFAP70Q5T0N1 1121 aa32.19■■■□□ 2.74
CNTNAP3B-204ENST00000467854 METP08581 1390 aa32.19■■■□□ 2.74
CNTNAP3B-204ENST00000467854 C14orf93Q9H972 538 aaKnown RBP32.18■■■□□ 2.74
CNTNAP3B-204ENST00000467854 NWD1Q149M9 1564 aa32.17■■■□□ 2.74
CNTNAP3B-204ENST00000467854 CHD2O14647 1828 aaKnown RBP32.16■■■□□ 2.74
CNTNAP3B-204ENST00000467854 STRCP1A6NGW2 1772 aa32.15■■■□□ 2.74
CNTNAP3B-204ENST00000467854 NBPF8Q3BBV2 869 aa32.15■■■□□ 2.74
CNTNAP3B-204ENST00000467854 ADGRB1O14514 1584 aa32.15■■■□□ 2.74
CNTNAP3B-204ENST00000467854 PIK3R4Q99570 1358 aa32.14■■■□□ 2.74
CNTNAP3B-204ENST00000467854 XRN1Q8IZH2 1706 aaKnown RBP32.13■■■□□ 2.73
CNTNAP3B-204ENST00000467854 PTPRUQ92729 1446 aa32.12■■■□□ 2.73
CNTNAP3B-204ENST00000467854 ZNF335Q9H4Z2 1342 aaPredicted RBP32.12■■■□□ 2.73
CNTNAP3B-204ENST00000467854 RALGAPBQ86X10 1494 aa32.1■■■□□ 2.73
CNTNAP3B-204ENST00000467854 TMEM132EQ6IEE7 984 aa32.09■■■□□ 2.73
CNTNAP3B-204ENST00000467854 KNDC1Q76NI1 1749 aa32.07■■■□□ 2.72
CNTNAP3B-204ENST00000467854 NKTRP30414 1462 aaKnown RBP32.05■■■□□ 2.72
CNTNAP3B-204ENST00000467854 KCNA6P17658 529 aa32.05■■■□□ 2.72
CNTNAP3B-204ENST00000467854 YTHDC2Q9H6S0 1430 aaKnown RBP32.05■■■□□ 2.72
CNTNAP3B-204ENST00000467854 LTBP4Q8N2S1 1624 aa32.04■■■□□ 2.72
CNTNAP3B-204ENST00000467854 NBPF1Q3BBV0 1214 aa32.04■■■□□ 2.72
CNTNAP3B-204ENST00000467854 ROCK2O75116 1388 aaKnown RBP32.04■■■□□ 2.72
CNTNAP3B-204ENST00000467854 LRPPRCP42704 1394 aaKnown RBP32.04■■■□□ 2.72
CNTNAP3B-204ENST00000467854 AMOTL2Q9Y2J4 779 aa32.03■■■□□ 2.72
CNTNAP3B-204ENST00000467854 CPS1P31327 1500 aa32.02■■■□□ 2.72
CNTNAP3B-204ENST00000467854 STK26Q9P289 416 aa31.99■■■□□ 2.71
CNTNAP3B-204ENST00000467854 TECPR2O15040 1411 aa31.99■■■□□ 2.71
CNTNAP3B-204ENST00000467854 GPRASP1Q5JY77 1395 aa31.98■■■□□ 2.71
CNTNAP3B-204ENST00000467854 PTCH1Q13635 1447 aa31.98■■■□□ 2.71
CNTNAP3B-204ENST00000467854 ARHGEF28Q8N1W1 1705 aaKnown RBP31.97■■■□□ 2.71
CNTNAP3B-204ENST00000467854 ABCC11Q96J66 1382 aa31.96■■■□□ 2.71
CNTNAP3B-204ENST00000467854 DLC1Q96QB1 1528 aa31.95■■■□□ 2.7
CNTNAP3B-204ENST00000467854 ILDR1Q86SU0 546 aaPredicted RBP31.94■■■□□ 2.7
CNTNAP3B-204ENST00000467854 LRRC7Q96NW7 1537 aa31.94■■■□□ 2.7
CNTNAP3B-204ENST00000467854 ROBO2Q9HCK4 1378 aa31.94■■■□□ 2.7
CNTNAP3B-204ENST00000467854 XIRP1Q702N8 1843 aaKnown RBP31.91■■■□□ 2.7
CNTNAP3B-204ENST00000467854 TRAK1Q9UPV9 953 aa31.91■■■□□ 2.7
CNTNAP3B-204ENST00000467854 CARD11Q9BXL7 1154 aa31.9■■■□□ 2.7
CNTNAP3B-204ENST00000467854 PROSER2Q86WR7 435 aaPredicted RBP31.88■■■□□ 2.69
CNTNAP3B-204ENST00000467854 FAM135BQ49AJ0 1406 aa31.87■■■□□ 2.69
CNTNAP3B-204ENST00000467854 TMEM94Q12767 1356 aa31.87■■■□□ 2.69
CNTNAP3B-204ENST00000467854 PLEKHH1Q9ULM0 1364 aa31.85■■■□□ 2.69
CNTNAP3B-204ENST00000467854 RBM33Q96EV2 1170 aaKnown RBP31.85■■■□□ 2.69
CNTNAP3B-204ENST00000467854 NALCNQ8IZF0 1738 aa31.85■■■□□ 2.69
CNTNAP3B-204ENST00000467854 WAPLQ7Z5K2 1190 aa31.82■■■□□ 2.68
CNTNAP3B-204ENST00000467854 PRAM1Q96QH2 718 aa31.82■■■□□ 2.68
CNTNAP3B-204ENST00000467854 ZEB1P37275 1124 aaPredicted RBP31.81■■■□□ 2.68
CNTNAP3B-204ENST00000467854 SIRT1Q96EB6 747 aa31.81■■■□□ 2.68
CNTNAP3B-204ENST00000467854 EIF3AQ14152 1382 aaKnown RBP31.81■■■□□ 2.68
CNTNAP3B-204ENST00000467854 QRICH2Q9H0J4 1663 aa31.8■■■□□ 2.68
CNTNAP3B-204ENST00000467854 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.8■■■□□ 2.68
CNTNAP3B-204ENST00000467854 POGKQ9P215 609 aa31.78■■■□□ 2.68
CNTNAP3B-204ENST00000467854 ADGRL3Q9HAR2 1447 aa31.77■■■□□ 2.68
CNTNAP3B-204ENST00000467854 NCOA3Q9Y6Q9 1424 aa31.77■■■□□ 2.68
CNTNAP3B-204ENST00000467854 SAFB2Q14151 953 aaKnown RBP eCLIP31.77■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms