RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 STAG3Q9UJ98 1225 aa16.37■□□□□ 0.21
MSH5-212ENST00000467319 IFT172Q9UG01 1749 aa16.36■□□□□ 0.21
MSH5-212ENST00000467319 LTBP4Q8N2S1 1624 aa16.36■□□□□ 0.21
MSH5-212ENST00000467319 PPLO60437 1756 aa16.35■□□□□ 0.21
MSH5-212ENST00000467319 PLEKHG1Q9ULL1 1385 aa16.35■□□□□ 0.21
MSH5-212ENST00000467319 SETBP1Q9Y6X0 1596 aa16.34■□□□□ 0.21
MSH5-212ENST00000467319 NRXN3Q9Y4C0 1643 aa16.34■□□□□ 0.21
MSH5-212ENST00000467319 DIP2AQ14689 1571 aa16.34■□□□□ 0.21
MSH5-212ENST00000467319 TXNDC2Q86VQ3 553 aa16.33■□□□□ 0.2
MSH5-212ENST00000467319 EID1Q9Y6B2 187 aa16.33■□□□□ 0.2
MSH5-212ENST00000467319 NWD1Q149M9 1564 aa16.3■□□□□ 0.2
MSH5-212ENST00000467319 CHGAP10645 457 aaKnown RBP16.3■□□□□ 0.2
MSH5-212ENST00000467319 STRCP1A6NGW2 1772 aa16.3■□□□□ 0.2
MSH5-212ENST00000467319 ADAMTS13Q76LX8 1427 aa16.29■□□□□ 0.2
MSH5-212ENST00000467319 DHX57Q6P158 1386 aaKnown RBP16.29■□□□□ 0.2
MSH5-212ENST00000467319 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.29■□□□□ 0.2
MSH5-212ENST00000467319 SETD1AO15047 1707 aaKnown RBP16.28■□□□□ 0.2
MSH5-212ENST00000467319 CPS1P31327 1500 aa16.28■□□□□ 0.2
MSH5-212ENST00000467319 ZNF335Q9H4Z2 1342 aaPredicted RBP16.27■□□□□ 0.2
MSH5-212ENST00000467319 RPGRIP1LQ68CZ1 1315 aa16.26■□□□□ 0.19
MSH5-212ENST00000467319 MYOM2P54296 1465 aa16.26■□□□□ 0.19
MSH5-212ENST00000467319 IQSEC2Q5JU85 1478 aa16.25■□□□□ 0.19
MSH5-212ENST00000467319 NRXN1Q9ULB1 1477 aa16.25■□□□□ 0.19
MSH5-212ENST00000467319 HDGFP51858 240 aaKnown RBP16.25■□□□□ 0.19
MSH5-212ENST00000467319 PPP1R15AO75807 674 aaPredicted RBP16.24■□□□□ 0.19
MSH5-212ENST00000467319 NKTRP30414 1462 aaKnown RBP16.23■□□□□ 0.19
MSH5-212ENST00000467319 XRN1Q8IZH2 1706 aaKnown RBP16.23■□□□□ 0.19
MSH5-212ENST00000467319 ZNF326Q5BKZ1 582 aaKnown RBP16.23■□□□□ 0.19
MSH5-212ENST00000467319 CHD2O14647 1828 aaKnown RBP16.22■□□□□ 0.19
MSH5-212ENST00000467319 PIK3C2GO75747 1445 aa16.22■□□□□ 0.19
MSH5-212ENST00000467319 NUTM2DQ5VT03 806 aaPredicted RBP16.22■□□□□ 0.19
MSH5-212ENST00000467319 PIK3R4Q99570 1358 aa16.21■□□□□ 0.19
MSH5-212ENST00000467319 PRAG1Q86YV5 1406 aa16.2■□□□□ 0.18
MSH5-212ENST00000467319 ALKQ9UM73 1620 aa16.2■□□□□ 0.18
MSH5-212ENST00000467319 SLC26A8Q96RN1 970 aa16.2■□□□□ 0.18
MSH5-212ENST00000467319 ASXL1Q8IXJ9 1541 aa16.19■□□□□ 0.18
MSH5-212ENST00000467319 LRRC7Q96NW7 1537 aa16.19■□□□□ 0.18
MSH5-212ENST00000467319 LAMC1P11047 1609 aa16.19■□□□□ 0.18
MSH5-212ENST00000467319 TBX22Q9Y458 520 aa16.19■□□□□ 0.18
MSH5-212ENST00000467319 XIRP1Q702N8 1843 aaKnown RBP16.18■□□□□ 0.18
MSH5-212ENST00000467319 VGFO15240 615 aaPredicted RBP16.18■□□□□ 0.18
MSH5-212ENST00000467319 PCGF6Q9BYE7 350 aa16.18■□□□□ 0.18
MSH5-212ENST00000467319 CERKQ8TCT0 537 aa16.17■□□□□ 0.18
MSH5-212ENST00000467319 PTPRUQ92729 1446 aa16.17■□□□□ 0.18
MSH5-212ENST00000467319 ADGRF5Q8IZF2 1346 aa16.17■□□□□ 0.18
MSH5-212ENST00000467319 METP08581 1390 aa16.16■□□□□ 0.18
MSH5-212ENST00000467319 RGL3Q3MIN7 710 aa16.16■□□□□ 0.18
MSH5-212ENST00000467319 KCNA6P17658 529 aa16.14■□□□□ 0.17
MSH5-212ENST00000467319 SENP3Q9H4L4 574 aaPredicted RBP16.13■□□□□ 0.17
MSH5-212ENST00000467319 KNDC1Q76NI1 1749 aa16.13■□□□□ 0.17
MSH5-212ENST00000467319 PTCH1Q13635 1447 aa16.12■□□□□ 0.17
MSH5-212ENST00000467319 BCANQ96GW7 911 aa16.12■□□□□ 0.17
MSH5-212ENST00000467319 ADGRB1O14514 1584 aa16.12■□□□□ 0.17
MSH5-212ENST00000467319 TECPR2O15040 1411 aa16.11■□□□□ 0.17
MSH5-212ENST00000467319 KIAA1210Q9ULL0 1709 aa16.1■□□□□ 0.17
MSH5-212ENST00000467319 STAC3Q96MF2 364 aa16.09■□□□□ 0.17
MSH5-212ENST00000467319 TMEM94Q12767 1356 aa16.09■□□□□ 0.17
MSH5-212ENST00000467319 NCOA3Q9Y6Q9 1424 aa16.08■□□□□ 0.16
MSH5-212ENST00000467319 SIN3AQ96ST3 1273 aa16.07■□□□□ 0.16
MSH5-212ENST00000467319 NALCNQ8IZF0 1738 aa16.06■□□□□ 0.16
MSH5-212ENST00000467319 LRPPRCP42704 1394 aaKnown RBP16.06■□□□□ 0.16
MSH5-212ENST00000467319 C14orf93Q9H972 538 aaKnown RBP16.06■□□□□ 0.16
MSH5-212ENST00000467319 DCAF11Q8TEB1 546 aa16.05■□□□□ 0.16
MSH5-212ENST00000467319 AMOTL2Q9Y2J4 779 aa16.05■□□□□ 0.16
MSH5-212ENST00000467319 YTHDC2Q9H6S0 1430 aaKnown RBP16.04■□□□□ 0.16
MSH5-212ENST00000467319 ROBO2Q9HCK4 1378 aa16.04■□□□□ 0.16
MSH5-212ENST00000467319 CLSPNQ9HAW4 1339 aa16.04■□□□□ 0.16
MSH5-212ENST00000467319 DLC1Q96QB1 1528 aa16.04■□□□□ 0.16
MSH5-212ENST00000467319 FBXO41Q8TF61 875 aa16.03■□□□□ 0.16
MSH5-212ENST00000467319 TRPM1Q7Z4N2 1603 aa16.03■□□□□ 0.16
MSH5-212ENST00000467319 DCCP43146 1447 aa16.02■□□□□ 0.16
MSH5-212ENST00000467319 ADGRL3Q9HAR2 1447 aa16.02■□□□□ 0.16
MSH5-212ENST00000467319 ABCC11Q96J66 1382 aa16.02■□□□□ 0.16
MSH5-212ENST00000467319 L3MBTL2Q969R5 705 aa16.02■□□□□ 0.16
MSH5-212ENST00000467319 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.02■□□□□ 0.15
MSH5-212ENST00000467319 CFAP70Q5T0N1 1121 aa16.01■□□□□ 0.15
MSH5-212ENST00000467319 PROSER2Q86WR7 435 aaPredicted RBP16.01■□□□□ 0.15
MSH5-212ENST00000467319 FAM135BQ49AJ0 1406 aa16.01■□□□□ 0.15
MSH5-212ENST00000467319 CDC42BPGQ6DT37 1551 aa16■□□□□ 0.15
MSH5-212ENST00000467319 ARHGEF28Q8N1W1 1705 aaKnown RBP15.99■□□□□ 0.15
MSH5-212ENST00000467319 NEUROD1Q13562 356 aa15.99■□□□□ 0.15
MSH5-212ENST00000467319 KDM2AQ9Y2K7 1162 aa15.99■□□□□ 0.15
MSH5-212ENST00000467319 MSH6P52701 1360 aa15.99■□□□□ 0.15
MSH5-212ENST00000467319 TMEM132EQ6IEE7 984 aa15.98■□□□□ 0.15
MSH5-212ENST00000467319 RBM33Q96EV2 1170 aaKnown RBP15.98■□□□□ 0.15
MSH5-212ENST00000467319 TONSLQ96HA7 1378 aa15.98■□□□□ 0.15
MSH5-212ENST00000467319 ADGRB2O60241 1585 aa15.96■□□□□ 0.15
MSH5-212ENST00000467319 RALGAPBQ86X10 1494 aa15.96■□□□□ 0.14
MSH5-212ENST00000467319 UBAP1LF5GYI3 381 aa15.95■□□□□ 0.14
MSH5-212ENST00000467319 PLEKHH1Q9ULM0 1364 aa15.95■□□□□ 0.14
MSH5-212ENST00000467319 GPRASP1Q5JY77 1395 aa15.94■□□□□ 0.14
MSH5-212ENST00000467319 ILDR1Q86SU0 546 aaPredicted RBP15.93■□□□□ 0.14
MSH5-212ENST00000467319 SIRT1Q96EB6 747 aa15.93■□□□□ 0.14
MSH5-212ENST00000467319 C19orf44Q9H6X5 657 aa15.93■□□□□ 0.14
MSH5-212ENST00000467319 MST1RQ04912 1400 aa15.93■□□□□ 0.14
MSH5-212ENST00000467319 ROBO1Q9Y6N7 1651 aa15.92■□□□□ 0.14
MSH5-212ENST00000467319 TOM1O60784 492 aa15.92■□□□□ 0.14
MSH5-212ENST00000467319 STK26Q9P289 416 aa15.92■□□□□ 0.14
MSH5-212ENST00000467319 FMN2Q9NZ56 1722 aa15.91■□□□□ 0.14
MSH5-212ENST00000467319 NBPF8Q3BBV2 869 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms