RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 LRPPRCP42704 1394 aaKnown RBP19.87■□□□□ 0.77
PRPF38B-204ENST00000467302 KTN1Q86UP2 1357 aaKnown RBP19.87■□□□□ 0.77
PRPF38B-204ENST00000467302 CNGB1Q14028 1251 aaPredicted RBP19.86■□□□□ 0.77
PRPF38B-204ENST00000467302 TSPOAP1O95153 1857 aa19.85■□□□□ 0.77
PRPF38B-204ENST00000467302 TMC1Q8TDI8 760 aa19.85■□□□□ 0.77
PRPF38B-204ENST00000467302 KIAA1210Q9ULL0 1709 aa19.85■□□□□ 0.77
PRPF38B-204ENST00000467302 UGGT1Q9NYU2 1555 aa19.85■□□□□ 0.77
PRPF38B-204ENST00000467302 IFT172Q9UG01 1749 aa19.84■□□□□ 0.77
PRPF38B-204ENST00000467302 NPATQ14207 1427 aa19.84■□□□□ 0.77
PRPF38B-204ENST00000467302 BRD4O60885 1362 aaPredicted RBP19.84■□□□□ 0.77
PRPF38B-204ENST00000467302 MYOM2P54296 1465 aa19.83■□□□□ 0.77
PRPF38B-204ENST00000467302 MROH2AA6NES4 1674 aa19.83■□□□□ 0.76
PRPF38B-204ENST00000467302 RALBP1Q15311 655 aa19.83■□□□□ 0.76
PRPF38B-204ENST00000467302 YEATS2Q9ULM3 1422 aa19.82■□□□□ 0.76
PRPF38B-204ENST00000467302 IQGAP1P46940 1657 aa19.82■□□□□ 0.76
PRPF38B-204ENST00000467302 ADGRB3O60242 1522 aa19.82■□□□□ 0.76
PRPF38B-204ENST00000467302 MYBBP1AQ9BQG0 1328 aaKnown RBP19.82■□□□□ 0.76
PRPF38B-204ENST00000467302 GGT6Q6P531 493 aa19.81■□□□□ 0.76
PRPF38B-204ENST00000467302 KIF13AQ9H1H9 1805 aa19.8■□□□□ 0.76
PRPF38B-204ENST00000467302 WASHC2CQ9Y4E1 1318 aa19.79■□□□□ 0.76
PRPF38B-204ENST00000467302 REREQ9P2R6 1566 aa19.79■□□□□ 0.76
PRPF38B-204ENST00000467302 COL17A1Q9UMD9 1497 aaPredicted RBP19.79■□□□□ 0.76
PRPF38B-204ENST00000467302 ERICH6Q7L0X2 663 aa19.77■□□□□ 0.76
PRPF38B-204ENST00000467302 ARHGAP31Q2M1Z3 1444 aa19.77■□□□□ 0.76
PRPF38B-204ENST00000467302 SIGLEC1Q9BZZ2 1709 aa19.76■□□□□ 0.75
PRPF38B-204ENST00000467302 PIK3C2BO00750 1634 aa19.76■□□□□ 0.75
PRPF38B-204ENST00000467302 CCDC136Q96JN2 1154 aa19.75■□□□□ 0.75
PRPF38B-204ENST00000467302 NOS1P29475 1434 aa19.75■□□□□ 0.75
PRPF38B-204ENST00000467302 SCAF11Q99590 1463 aaKnown RBP19.74■□□□□ 0.75
PRPF38B-204ENST00000467302 NRXN1Q9ULB1 1477 aa19.74■□□□□ 0.75
PRPF38B-204ENST00000467302 PARD3Q8TEW0 1356 aa19.74■□□□□ 0.75
PRPF38B-204ENST00000467302 CFAP65Q6ZU64 1925 aaKnown RBP19.73■□□□□ 0.75
PRPF38B-204ENST00000467302 PPLO60437 1756 aa19.73■□□□□ 0.75
PRPF38B-204ENST00000467302 SYNMO15061 1565 aa19.72■□□□□ 0.75
PRPF38B-204ENST00000467302 SENP3-EIF4A1A0A087X0R7 540 aa19.72■□□□□ 0.75
PRPF38B-204ENST00000467302 TESK2Q96S53 571 aa19.72■□□□□ 0.75
PRPF38B-204ENST00000467302 AGLP35573 1532 aa19.72■□□□□ 0.75
PRPF38B-204ENST00000467302 NLRP13Q86W25 1043 aa19.71■□□□□ 0.75
PRPF38B-204ENST00000467302 PER1O15534 1290 aaPredicted RBP19.71■□□□□ 0.75
PRPF38B-204ENST00000467302 TMF1P82094 1093 aa19.69■□□□□ 0.74
PRPF38B-204ENST00000467302 EIF3AQ14152 1382 aaKnown RBP19.69■□□□□ 0.74
PRPF38B-204ENST00000467302 ARHGEF40Q8TER5 1519 aa19.68■□□□□ 0.74
PRPF38B-204ENST00000467302 BCL11AQ9H165 835 aa19.68■□□□□ 0.74
PRPF38B-204ENST00000467302 DISP3Q9P2K9 1392 aa19.68■□□□□ 0.74
PRPF38B-204ENST00000467302 PREX1Q8TCU6 1659 aa19.68■□□□□ 0.74
PRPF38B-204ENST00000467302 SETBP1Q9Y6X0 1596 aa19.67■□□□□ 0.74
PRPF38B-204ENST00000467302 RRP1P56182 461 aaKnown RBP19.66■□□□□ 0.74
PRPF38B-204ENST00000467302 RPGRIP1LQ68CZ1 1315 aa19.66■□□□□ 0.74
PRPF38B-204ENST00000467302 CHGAP10645 457 aaKnown RBP19.66■□□□□ 0.74
PRPF38B-204ENST00000467302 ADGRF5Q8IZF2 1346 aa19.65■□□□□ 0.74
PRPF38B-204ENST00000467302 PDE3BQ13370 1112 aa19.64■□□□□ 0.74
PRPF38B-204ENST00000467302 INSRP06213 1382 aa19.64■□□□□ 0.73
PRPF38B-204ENST00000467302 NOP58Q9Y2X3 529 aaKnown RBP19.64■□□□□ 0.73
PRPF38B-204ENST00000467302 PIK3C2GO75747 1445 aa19.63■□□□□ 0.73
PRPF38B-204ENST00000467302 MYO3AQ8NEV4 1616 aa19.63■□□□□ 0.73
PRPF38B-204ENST00000467302 RCAN3Q9UKA8 241 aa19.63■□□□□ 0.73
PRPF38B-204ENST00000467302 CFAP70Q5T0N1 1121 aa19.61■□□□□ 0.73
PRPF38B-204ENST00000467302 PPP6R1Q9UPN7 881 aa19.61■□□□□ 0.73
PRPF38B-204ENST00000467302 NEXMIFQ5QGS0 1516 aa19.61■□□□□ 0.73
PRPF38B-204ENST00000467302 SLC52A1Q9NWF4 448 aa19.59■□□□□ 0.73
PRPF38B-204ENST00000467302 CLTCQ00610 1675 aaKnown RBP19.59■□□□□ 0.73
PRPF38B-204ENST00000467302 CDCA8Q53HL2 280 aa19.59■□□□□ 0.73
PRPF38B-204ENST00000467302 PAK3O75914 559 aaPredicted RBP19.58■□□□□ 0.73
PRPF38B-204ENST00000467302 EXOC6Q8TAG9 804 aa19.58■□□□□ 0.73
PRPF38B-204ENST00000467302 KDM5AP29375 1690 aaKnown RBP19.58■□□□□ 0.72
PRPF38B-204ENST00000467302 ERVK-7P63135 1459 aa19.58■□□□□ 0.72
PRPF38B-204ENST00000467302 BLMP54132 1417 aaPredicted RBP19.58■□□□□ 0.72
PRPF38B-204ENST00000467302 SLC24A1O60721 1099 aa19.58■□□□□ 0.72
PRPF38B-204ENST00000467302 PANK3Q9H999 370 aa19.57■□□□□ 0.72
PRPF38B-204ENST00000467302 TMEM131LA2VDJ0 1609 aa19.57■□□□□ 0.72
PRPF38B-204ENST00000467302 IPO9Q96P70 1041 aaKnown RBP19.56■□□□□ 0.72
PRPF38B-204ENST00000467302 ADGRB1O14514 1584 aa19.56■□□□□ 0.72
PRPF38B-204ENST00000467302 MYO5BQ9ULV0 1848 aa19.55■□□□□ 0.72
PRPF38B-204ENST00000467302 ANP32AP39687 249 aaKnown RBP19.55■□□□□ 0.72
PRPF38B-204ENST00000467302 SALL2Q9Y467 1007 aaPredicted RBP19.54■□□□□ 0.72
PRPF38B-204ENST00000467302 ZFYVE9O95405 1425 aa19.54■□□□□ 0.72
PRPF38B-204ENST00000467302 SBNO2Q9Y2G9 1366 aa19.54■□□□□ 0.72
PRPF38B-204ENST00000467302 MYOM1P52179 1685 aa19.54■□□□□ 0.72
PRPF38B-204ENST00000467302 CC2D1BQ5T0F9 858 aaKnown RBP19.54■□□□□ 0.72
PRPF38B-204ENST00000467302 IDI1Q13907 227 aa19.53■□□□□ 0.72
PRPF38B-204ENST00000467302 CDCA7LQ96GN5 454 aa19.53■□□□□ 0.72
PRPF38B-204ENST00000467302 C14orf93Q9H972 538 aaKnown RBP19.53■□□□□ 0.72
PRPF38B-204ENST00000467302 SPATA31D1Q6ZQQ2 1576 aa19.52■□□□□ 0.72
PRPF38B-204ENST00000467302 VGFO15240 615 aaPredicted RBP19.52■□□□□ 0.72
PRPF38B-204ENST00000467302 TCERG1O14776 1098 aaKnown RBP19.51■□□□□ 0.71
PRPF38B-204ENST00000467302 QRICH2Q9H0J4 1663 aa19.5■□□□□ 0.71
PRPF38B-204ENST00000467302 CENPJQ9HC77 1338 aaPredicted RBP19.47■□□□□ 0.71
PRPF38B-204ENST00000467302 ARHGEF28Q8N1W1 1705 aaKnown RBP19.46■□□□□ 0.71
PRPF38B-204ENST00000467302 MS4A1P11836 297 aa19.45■□□□□ 0.7
PRPF38B-204ENST00000467302 FBXO31Q5XUX0 539 aaPredicted RBP19.45■□□□□ 0.7
PRPF38B-204ENST00000467302 ZBTB47Q9UFB7 747 aaPredicted RBP19.45■□□□□ 0.7
PRPF38B-204ENST00000467302 KNSTRNQ9Y448 316 aa19.45■□□□□ 0.7
PRPF38B-204ENST00000467302 DEKP35659 375 aaKnown RBP19.43■□□□□ 0.7
PRPF38B-204ENST00000467302 NUTM2DQ5VT03 806 aaPredicted RBP19.43■□□□□ 0.7
PRPF38B-204ENST00000467302 TRAK1Q9UPV9 953 aa19.43■□□□□ 0.7
PRPF38B-204ENST00000467302 ASXL1Q8IXJ9 1541 aa19.42■□□□□ 0.7
PRPF38B-204ENST00000467302 PDE4AP27815 886 aa19.42■□□□□ 0.7
PRPF38B-204ENST00000467302 TMEM132EQ6IEE7 984 aa19.42■□□□□ 0.7
PRPF38B-204ENST00000467302 ADAMTS8Q9UP79 889 aa19.42■□□□□ 0.7
PRPF38B-204ENST00000467302 PLIN1O60240 522 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms