RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 PROM2Q8N271 834 aa13.43□□□□□ -0.26
APOBEC1-202ENST00000467171 DCAF11Q8TEB1 546 aa13.42□□□□□ -0.26
APOBEC1-202ENST00000467171 RICTORQ6R327 1708 aa13.42□□□□□ -0.26
APOBEC1-202ENST00000467171 DIP2CQ9Y2E4 1556 aa13.41□□□□□ -0.26
APOBEC1-202ENST00000467171 ABCA6Q8N139 1617 aa13.41□□□□□ -0.26
APOBEC1-202ENST00000467171 EFCAB6Q5THR3 1501 aa13.4□□□□□ -0.26
APOBEC1-202ENST00000467171 NEURL4Q96JN8 1562 aa13.4□□□□□ -0.26
APOBEC1-202ENST00000467171 PRAG1Q86YV5 1406 aa13.39□□□□□ -0.27
APOBEC1-202ENST00000467171 YEATS2Q9ULM3 1422 aa13.39□□□□□ -0.27
APOBEC1-202ENST00000467171 HIRIP3Q9BW71 556 aaPredicted RBP13.39□□□□□ -0.27
APOBEC1-202ENST00000467171 E9PCH4 1651 aa13.39□□□□□ -0.27
APOBEC1-202ENST00000467171 PPRC1Q5VV67 1664 aaKnown RBP13.38□□□□□ -0.27
APOBEC1-202ENST00000467171 DDX10Q13206 875 aaKnown RBP13.38□□□□□ -0.27
APOBEC1-202ENST00000467171 REREQ9P2R6 1566 aa13.37□□□□□ -0.27
APOBEC1-202ENST00000467171 GPRASP1Q5JY77 1395 aa13.37□□□□□ -0.27
APOBEC1-202ENST00000467171 GGT6Q6P531 493 aa13.37□□□□□ -0.27
APOBEC1-202ENST00000467171 ARHGAP31Q2M1Z3 1444 aa13.37□□□□□ -0.27
APOBEC1-202ENST00000467171 WASHC2CQ9Y4E1 1318 aa13.37□□□□□ -0.27
APOBEC1-202ENST00000467171 USP47Q96K76 1375 aa13.36□□□□□ -0.27
APOBEC1-202ENST00000467171 ABCC3O15438 1527 aa13.36□□□□□ -0.27
APOBEC1-202ENST00000467171 RGL3Q3MIN7 710 aa13.36□□□□□ -0.27
APOBEC1-202ENST00000467171 KDM2AQ9Y2K7 1162 aa13.36□□□□□ -0.27
APOBEC1-202ENST00000467171 NPATQ14207 1427 aa13.36□□□□□ -0.27
APOBEC1-202ENST00000467171 ARID4BQ4LE39 1312 aaPredicted RBP13.36□□□□□ -0.27
APOBEC1-202ENST00000467171 WASHC2AQ641Q2 1341 aa13.36□□□□□ -0.27
APOBEC1-202ENST00000467171 AGLP35573 1532 aa13.35□□□□□ -0.27
APOBEC1-202ENST00000467171 ZNF326Q5BKZ1 582 aaKnown RBP13.35□□□□□ -0.27
APOBEC1-202ENST00000467171 ZNF579Q8NAF0 562 aaKnown RBP13.35□□□□□ -0.27
APOBEC1-202ENST00000467171 CARD11Q9BXL7 1154 aa13.35□□□□□ -0.27
APOBEC1-202ENST00000467171 ZRANB1Q9UGI0 708 aa13.35□□□□□ -0.27
APOBEC1-202ENST00000467171 CNTLNQ9NXG0 1405 aa13.35□□□□□ -0.27
APOBEC1-202ENST00000467171 CCDC7Q96M83 1385 aa13.33□□□□□ -0.27
APOBEC1-202ENST00000467171 NOS1P29475 1434 aa13.33□□□□□ -0.28
APOBEC1-202ENST00000467171 ROCK2O75116 1388 aaKnown RBP13.32□□□□□ -0.28
APOBEC1-202ENST00000467171 COL17A1Q9UMD9 1497 aaPredicted RBP13.32□□□□□ -0.28
APOBEC1-202ENST00000467171 SPHKAPQ2M3C7 1700 aa13.32□□□□□ -0.28
APOBEC1-202ENST00000467171 CLTCL1P53675 1640 aa13.31□□□□□ -0.28
APOBEC1-202ENST00000467171 C11orf95C9JLR9 678 aaPredicted RBP13.3□□□□□ -0.28
APOBEC1-202ENST00000467171 MNX1P50219 401 aaPredicted RBP13.3□□□□□ -0.28
APOBEC1-202ENST00000467171 PAK3O75914 559 aaPredicted RBP13.29□□□□□ -0.28
APOBEC1-202ENST00000467171 KIF7Q2M1P5 1343 aa13.29□□□□□ -0.28
APOBEC1-202ENST00000467171 KIF13AQ9H1H9 1805 aa13.29□□□□□ -0.28
APOBEC1-202ENST00000467171 MYOM2P54296 1465 aa13.29□□□□□ -0.28
APOBEC1-202ENST00000467171 ANP32CO43423 234 aa13.28□□□□□ -0.28
APOBEC1-202ENST00000467171 RPGRIP1LQ68CZ1 1315 aa13.28□□□□□ -0.28
APOBEC1-202ENST00000467171 LAMC1P11047 1609 aa13.28□□□□□ -0.28
APOBEC1-202ENST00000467171 ZC3H13Q5T200 1668 aaKnown RBP13.28□□□□□ -0.28
APOBEC1-202ENST00000467171 CCER2I3L3R5 266 aa13.27□□□□□ -0.29
APOBEC1-202ENST00000467171 NBPF1Q3BBV0 1214 aa13.27□□□□□ -0.29
APOBEC1-202ENST00000467171 SLC52A1Q9NWF4 448 aa13.27□□□□□ -0.29
APOBEC1-202ENST00000467171 TRPM1Q7Z4N2 1603 aa13.27□□□□□ -0.29
APOBEC1-202ENST00000467171 ADGRB3O60242 1522 aa13.26□□□□□ -0.29
APOBEC1-202ENST00000467171 CEP152O94986 1710 aa13.26□□□□□ -0.29
APOBEC1-202ENST00000467171 ARHGEF40Q8TER5 1519 aa13.26□□□□□ -0.29
APOBEC1-202ENST00000467171 NRXN1Q9ULB1 1477 aa13.25□□□□□ -0.29
APOBEC1-202ENST00000467171 ST20-MTHFSA0A0A6YYL1 179 aa13.25□□□□□ -0.29
APOBEC1-202ENST00000467171 CAMSAP1Q5T5Y3 1602 aa13.24□□□□□ -0.29
APOBEC1-202ENST00000467171 CENPBP07199 599 aaPredicted RBP13.24□□□□□ -0.29
APOBEC1-202ENST00000467171 MADDQ8WXG6 1647 aa13.24□□□□□ -0.29
APOBEC1-202ENST00000467171 UGGT1Q9NYU2 1555 aa13.24□□□□□ -0.29
APOBEC1-202ENST00000467171 TSPOAP1O95153 1857 aa13.23□□□□□ -0.29
APOBEC1-202ENST00000467171 POTEIP0CG38 1075 aa13.21□□□□□ -0.29
APOBEC1-202ENST00000467171 TESK2Q96S53 571 aa13.21□□□□□ -0.29
APOBEC1-202ENST00000467171 SCAF11Q99590 1463 aaKnown RBP13.21□□□□□ -0.3
APOBEC1-202ENST00000467171 ADGRF5Q8IZF2 1346 aa13.2□□□□□ -0.3
APOBEC1-202ENST00000467171 SLC24A1O60721 1099 aa13.2□□□□□ -0.3
APOBEC1-202ENST00000467171 IDI1Q13907 227 aa13.2□□□□□ -0.3
APOBEC1-202ENST00000467171 DCBLD2Q96PD2 775 aa13.2□□□□□ -0.3
APOBEC1-202ENST00000467171 PIK3C2BO00750 1634 aa13.2□□□□□ -0.3
APOBEC1-202ENST00000467171 SYNMO15061 1565 aa13.2□□□□□ -0.3
APOBEC1-202ENST00000467171 ERVK-7P63135 1459 aa13.19□□□□□ -0.3
APOBEC1-202ENST00000467171 ZFYVE9O95405 1425 aa13.19□□□□□ -0.3
APOBEC1-202ENST00000467171 DNAJC5Q9H3Z4 198 aa13.18□□□□□ -0.3
APOBEC1-202ENST00000467171 C14orf93Q9H972 538 aaKnown RBP13.18□□□□□ -0.3
APOBEC1-202ENST00000467171 KIAA1210Q9ULL0 1709 aa13.18□□□□□ -0.3
APOBEC1-202ENST00000467171 PIK3C2GO75747 1445 aa13.17□□□□□ -0.3
APOBEC1-202ENST00000467171 VGFO15240 615 aaPredicted RBP13.17□□□□□ -0.3
APOBEC1-202ENST00000467171 CHGAP10645 457 aaKnown RBP13.17□□□□□ -0.3
APOBEC1-202ENST00000467171 EIF3AQ14152 1382 aaKnown RBP13.17□□□□□ -0.3
APOBEC1-202ENST00000467171 KIF1BO60333 1816 aa13.16□□□□□ -0.3
APOBEC1-202ENST00000467171 TMF1P82094 1093 aa13.16□□□□□ -0.3
APOBEC1-202ENST00000467171 CFAP70Q5T0N1 1121 aa13.16□□□□□ -0.3
APOBEC1-202ENST00000467171 LHX8Q68G74 356 aa13.16□□□□□ -0.3
APOBEC1-202ENST00000467171 SIGLEC1Q9BZZ2 1709 aa13.16□□□□□ -0.3
APOBEC1-202ENST00000467171 PLEKHG5O94827 1062 aa13.15□□□□□ -0.3
APOBEC1-202ENST00000467171 PRKRIP1Q9H875 184 aaPredicted RBP13.15□□□□□ -0.3
APOBEC1-202ENST00000467171 POLR1AO95602 1720 aaPredicted RBP13.15□□□□□ -0.3
APOBEC1-202ENST00000467171 GALR2O43603 387 aaPredicted RBP13.14□□□□□ -0.31
APOBEC1-202ENST00000467171 FBXO31Q5XUX0 539 aaPredicted RBP13.14□□□□□ -0.31
APOBEC1-202ENST00000467171 PHF12Q96QT6 1004 aa13.14□□□□□ -0.31
APOBEC1-202ENST00000467171 ZMYM3Q14202 1370 aa13.14□□□□□ -0.31
APOBEC1-202ENST00000467171 SPATA31D1Q6ZQQ2 1576 aa13.14□□□□□ -0.31
APOBEC1-202ENST00000467171 SETBP1Q9Y6X0 1596 aa13.13□□□□□ -0.31
APOBEC1-202ENST00000467171 CDCA8Q53HL2 280 aa13.13□□□□□ -0.31
APOBEC1-202ENST00000467171 ESF1Q9H501 851 aaKnown RBP13.13□□□□□ -0.31
APOBEC1-202ENST00000467171 IFT172Q9UG01 1749 aa13.13□□□□□ -0.31
APOBEC1-202ENST00000467171 MROH2AA6NES4 1674 aa13.12□□□□□ -0.31
APOBEC1-202ENST00000467171 PREX1Q8TCU6 1659 aa13.12□□□□□ -0.31
APOBEC1-202ENST00000467171 MLECQ14165 292 aa13.12□□□□□ -0.31
APOBEC1-202ENST00000467171 YTHDC1Q96MU7 727 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms