RNA–Protein interactions for RNA: ENST00000467049.1

PTPDC1-203, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

TSL 2

Gene PTPDC1, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-203ENST00000467049 RGS17Q9UGC6 210 aaPredicted RBP14.01□□□□□ -0.17
PTPDC1-203ENST00000467049 PROSER2Q86WR7 435 aaPredicted RBP13.99□□□□□ -0.17
PTPDC1-203ENST00000467049 CHIC2Q9UKJ5 165 aa13.99□□□□□ -0.17
PTPDC1-203ENST00000467049 PHLPP1O60346 1717 aa13.98□□□□□ -0.17
PTPDC1-203ENST00000467049 ZFYVE9O95405 1425 aa13.98□□□□□ -0.17
PTPDC1-203ENST00000467049 SLC26A8Q96RN1 970 aa13.98□□□□□ -0.17
PTPDC1-203ENST00000467049 TMEM131LA2VDJ0 1609 aa13.98□□□□□ -0.17
PTPDC1-203ENST00000467049 UNC13BO14795 1591 aa13.97□□□□□ -0.17
PTPDC1-203ENST00000467049 MSH6P52701 1360 aa13.97□□□□□ -0.17
PTPDC1-203ENST00000467049 PLEKHG1Q9ULL1 1385 aa13.97□□□□□ -0.17
PTPDC1-203ENST00000467049 ANKRD50Q9ULJ7 1429 aa13.96□□□□□ -0.17
PTPDC1-203ENST00000467049 RIMS2Q9UQ26 1411 aa13.95□□□□□ -0.18
PTPDC1-203ENST00000467049 NCOA3Q9Y6Q9 1424 aa13.94□□□□□ -0.18
PTPDC1-203ENST00000467049 DIP2AQ14689 1571 aa13.94□□□□□ -0.18
PTPDC1-203ENST00000467049 HDGFP51858 240 aaKnown RBP13.93□□□□□ -0.18
PTPDC1-203ENST00000467049 E9PCH4 1651 aa13.93□□□□□ -0.18
PTPDC1-203ENST00000467049 COL16A1Q07092 1604 aaPredicted RBP13.93□□□□□ -0.18
PTPDC1-203ENST00000467049 POTEAQ6S8J7 498 aa13.92□□□□□ -0.18
PTPDC1-203ENST00000467049 IQGAP3Q86VI3 1631 aa13.91□□□□□ -0.18
PTPDC1-203ENST00000467049 BCANQ96GW7 911 aa13.91□□□□□ -0.18
PTPDC1-203ENST00000467049 JCADQ9P266 1359 aa13.91□□□□□ -0.18
PTPDC1-203ENST00000467049 RBM33Q96EV2 1170 aaKnown RBP13.91□□□□□ -0.18
PTPDC1-203ENST00000467049 SLAIN2Q9P270 581 aa13.91□□□□□ -0.18
PTPDC1-203ENST00000467049 TBX22Q9Y458 520 aa13.91□□□□□ -0.18
PTPDC1-203ENST00000467049 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.9□□□□□ -0.18
PTPDC1-203ENST00000467049 PPP1R15AO75807 674 aaPredicted RBP13.89□□□□□ -0.19
PTPDC1-203ENST00000467049 FAM50AQ14320 339 aaKnown RBP13.89□□□□□ -0.19
PTPDC1-203ENST00000467049 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.89□□□□□ -0.19
PTPDC1-203ENST00000467049 PIK3R4Q99570 1358 aa13.89□□□□□ -0.19
PTPDC1-203ENST00000467049 AHDC1Q5TGY3 1603 aaPredicted RBP13.89□□□□□ -0.19
PTPDC1-203ENST00000467049 ADAMTS13Q76LX8 1427 aa13.88□□□□□ -0.19
PTPDC1-203ENST00000467049 SHPRHQ149N8 1683 aa13.88□□□□□ -0.19
PTPDC1-203ENST00000467049 SETD1AO15047 1707 aaKnown RBP13.88□□□□□ -0.19
PTPDC1-203ENST00000467049 TRPM2O94759 1503 aa13.87□□□□□ -0.19
PTPDC1-203ENST00000467049 ROCK1Q13464 1354 aa13.87□□□□□ -0.19
PTPDC1-203ENST00000467049 SPATA31A6Q5VVP1 1343 aa13.84□□□□□ -0.19
PTPDC1-203ENST00000467049 XRN1Q8IZH2 1706 aaKnown RBP13.84□□□□□ -0.19
PTPDC1-203ENST00000467049 CADPS2Q86UW7 1296 aa13.83□□□□□ -0.2
PTPDC1-203ENST00000467049 LRP6O75581 1613 aa13.83□□□□□ -0.2
PTPDC1-203ENST00000467049 SPHKAPQ2M3C7 1700 aa13.83□□□□□ -0.2
PTPDC1-203ENST00000467049 CHGAP10645 457 aaKnown RBP13.82□□□□□ -0.2
PTPDC1-203ENST00000467049 C19orf44Q9H6X5 657 aa13.82□□□□□ -0.2
PTPDC1-203ENST00000467049 NRXN3Q9Y4C0 1643 aa13.82□□□□□ -0.2
PTPDC1-203ENST00000467049 DCCP43146 1447 aa13.82□□□□□ -0.2
PTPDC1-203ENST00000467049 SETBP1Q9Y6X0 1596 aa13.82□□□□□ -0.2
PTPDC1-203ENST00000467049 C14orf37Q86TY3 774 aa13.81□□□□□ -0.2
PTPDC1-203ENST00000467049 ATF3P18847 181 aa13.8□□□□□ -0.2
PTPDC1-203ENST00000467049 PTPRUQ92729 1446 aa13.8□□□□□ -0.2
PTPDC1-203ENST00000467049 NHSL1Q5SYE7 1610 aa13.8□□□□□ -0.2
PTPDC1-203ENST00000467049 NUP155O75694 1391 aa13.78□□□□□ -0.2
PTPDC1-203ENST00000467049 ZNF772Q68DY9 489 aaPredicted RBP13.78□□□□□ -0.2
PTPDC1-203ENST00000467049 NUTM2DQ5VT03 806 aaPredicted RBP13.78□□□□□ -0.2
PTPDC1-203ENST00000467049 MEX3CQ5U5Q3 659 aaKnown RBP13.77□□□□□ -0.21
PTPDC1-203ENST00000467049 AMOTL2Q9Y2J4 779 aa13.77□□□□□ -0.21
PTPDC1-203ENST00000467049 ASXL1Q8IXJ9 1541 aa13.77□□□□□ -0.21
PTPDC1-203ENST00000467049 BRINP3Q76B58 766 aa13.76□□□□□ -0.21
PTPDC1-203ENST00000467049 CDK12Q9NYV4 1490 aaPredicted RBP13.75□□□□□ -0.21
PTPDC1-203ENST00000467049 SETD5Q9C0A6 1442 aa13.75□□□□□ -0.21
PTPDC1-203ENST00000467049 MST1RQ04912 1400 aa13.74□□□□□ -0.21
PTPDC1-203ENST00000467049 KIF1BO60333 1816 aa13.74□□□□□ -0.21
PTPDC1-203ENST00000467049 NALCNQ8IZF0 1738 aa13.74□□□□□ -0.21
PTPDC1-203ENST00000467049 NEXMIFQ5QGS0 1516 aa13.73□□□□□ -0.21
PTPDC1-203ENST00000467049 CLTCL1P53675 1640 aa13.73□□□□□ -0.21
PTPDC1-203ENST00000467049 ADGRL3Q9HAR2 1447 aa13.72□□□□□ -0.21
PTPDC1-203ENST00000467049 LAMC1P11047 1609 aa13.72□□□□□ -0.21
PTPDC1-203ENST00000467049 UPF1Q92900 1129 aaKnown RBP eCLIP13.71□□□□□ -0.21
PTPDC1-203ENST00000467049 METP08581 1390 aa13.7□□□□□ -0.22
PTPDC1-203ENST00000467049 RXRBP28702 533 aa13.7□□□□□ -0.22
PTPDC1-203ENST00000467049 TRIM52Q96A61 297 aa13.7□□□□□ -0.22
PTPDC1-203ENST00000467049 ZNF326Q5BKZ1 582 aaKnown RBP13.68□□□□□ -0.22
PTPDC1-203ENST00000467049 AFF2P51816 1311 aa13.68□□□□□ -0.22
PTPDC1-203ENST00000467049 NUTM2BA6NNL0 878 aaPredicted RBP13.67□□□□□ -0.22
PTPDC1-203ENST00000467049 NUTM2EB1AL46 878 aaPredicted RBP13.67□□□□□ -0.22
PTPDC1-203ENST00000467049 NUTM2AQ8IVF1 878 aaPredicted RBP13.67□□□□□ -0.22
PTPDC1-203ENST00000467049 LRRC59Q96AG4 307 aaKnown RBP13.67□□□□□ -0.22
PTPDC1-203ENST00000467049 PNPLA6Q8IY17 1366 aa13.67□□□□□ -0.22
PTPDC1-203ENST00000467049 PTCH1Q13635 1447 aa13.67□□□□□ -0.22
PTPDC1-203ENST00000467049 PRAG1Q86YV5 1406 aa13.67□□□□□ -0.22
PTPDC1-203ENST00000467049 ITGAEP38570 1179 aa13.66□□□□□ -0.22
PTPDC1-203ENST00000467049 C1orf167Q5SNV9 1468 aa13.65□□□□□ -0.22
PTPDC1-203ENST00000467049 PPLO60437 1756 aa13.64□□□□□ -0.23
PTPDC1-203ENST00000467049 RGS12O14924 1447 aa13.63□□□□□ -0.23
PTPDC1-203ENST00000467049 COL22A1Q8NFW1 1626 aaPredicted RBP13.62□□□□□ -0.23
PTPDC1-203ENST00000467049 RBM6P78332 1123 aaKnown RBP13.62□□□□□ -0.23
PTPDC1-203ENST00000467049 NAIPQ13075 1403 aa13.62□□□□□ -0.23
PTPDC1-203ENST00000467049 RRBP1Q9P2E9 1410 aaKnown RBP13.62□□□□□ -0.23
PTPDC1-203ENST00000467049 C8orf37Q96NL8 207 aa13.61□□□□□ -0.23
PTPDC1-203ENST00000467049 DDX17Q92841 729 aaKnown RBP13.6□□□□□ -0.23
PTPDC1-203ENST00000467049 QTRT2Q9H974 415 aaKnown RBP13.6□□□□□ -0.23
PTPDC1-203ENST00000467049 SOS2Q07890 1332 aaPredicted RBP13.6□□□□□ -0.23
PTPDC1-203ENST00000467049 RPGRIP1LQ68CZ1 1315 aa13.6□□□□□ -0.23
PTPDC1-203ENST00000467049 MARF1Q9Y4F3 1742 aaKnown RBP13.6□□□□□ -0.23
PTPDC1-203ENST00000467049 ROBO2Q9HCK4 1378 aa13.59□□□□□ -0.23
PTPDC1-203ENST00000467049 VGFO15240 615 aaPredicted RBP13.59□□□□□ -0.23
PTPDC1-203ENST00000467049 HFM1A2PYH4 1435 aa13.59□□□□□ -0.23
PTPDC1-203ENST00000467049 CDC42BPGQ6DT37 1551 aa13.59□□□□□ -0.23
PTPDC1-203ENST00000467049 NGLY1Q96IV0 654 aa13.57□□□□□ -0.24
PTPDC1-203ENST00000467049 ATAD2Q6PL18 1390 aa13.55□□□□□ -0.24
PTPDC1-203ENST00000467049 KNDC1Q76NI1 1749 aa13.55□□□□□ -0.24
PTPDC1-203ENST00000467049 IFT172Q9UG01 1749 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms