RNA–Protein interactions for RNA: ENST00000466950.5

SEC22A-203, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 5

Gene SEC22A, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-203ENST00000466950 ZFYVE9O95405 1425 aa19.04■□□□□ 0.64
SEC22A-203ENST00000466950 L3MBTL2Q969R5 705 aa19.04■□□□□ 0.64
SEC22A-203ENST00000466950 TRPM1Q7Z4N2 1603 aa19.03■□□□□ 0.64
SEC22A-203ENST00000466950 POLR1AO95602 1720 aaPredicted RBP19.03■□□□□ 0.64
SEC22A-203ENST00000466950 PRAG1Q86YV5 1406 aa19.01■□□□□ 0.63
SEC22A-203ENST00000466950 RIMS2Q9UQ26 1411 aa19■□□□□ 0.63
SEC22A-203ENST00000466950 TMEM2Q9UHN6 1383 aa18.99■□□□□ 0.63
SEC22A-203ENST00000466950 CHGAP10645 457 aaKnown RBP18.99■□□□□ 0.63
SEC22A-203ENST00000466950 RGL3Q3MIN7 710 aa18.99■□□□□ 0.63
SEC22A-203ENST00000466950 STAG3Q9UJ98 1225 aa18.99■□□□□ 0.63
SEC22A-203ENST00000466950 SETD1AO15047 1707 aaKnown RBP18.98■□□□□ 0.63
SEC22A-203ENST00000466950 PPP1R15AO75807 674 aaPredicted RBP18.98■□□□□ 0.63
SEC22A-203ENST00000466950 PLPPR3Q6T4P5 718 aa18.98■□□□□ 0.63
SEC22A-203ENST00000466950 PIK3C2GO75747 1445 aa18.98■□□□□ 0.63
SEC22A-203ENST00000466950 RALGAPBQ86X10 1494 aa18.97■□□□□ 0.63
SEC22A-203ENST00000466950 ZNF326Q5BKZ1 582 aaKnown RBP18.97■□□□□ 0.63
SEC22A-203ENST00000466950 SETBP1Q9Y6X0 1596 aa18.97■□□□□ 0.63
SEC22A-203ENST00000466950 NRXN3Q9Y4C0 1643 aa18.96■□□□□ 0.63
SEC22A-203ENST00000466950 IQGAP1P46940 1657 aa18.96■□□□□ 0.63
SEC22A-203ENST00000466950 DCAF11Q8TEB1 546 aa18.96■□□□□ 0.63
SEC22A-203ENST00000466950 THEMISQ8N1K5 641 aaPredicted RBP18.95■□□□□ 0.62
SEC22A-203ENST00000466950 LMTK3Q96Q04 1460 aa18.95■□□□□ 0.62
SEC22A-203ENST00000466950 SCAF11Q99590 1463 aaKnown RBP18.93■□□□□ 0.62
SEC22A-203ENST00000466950 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.93■□□□□ 0.62
SEC22A-203ENST00000466950 DIP2AQ14689 1571 aa18.93■□□□□ 0.62
SEC22A-203ENST00000466950 VGFO15240 615 aaPredicted RBP18.92■□□□□ 0.62
SEC22A-203ENST00000466950 HDGFP51858 240 aaKnown RBP18.91■□□□□ 0.62
SEC22A-203ENST00000466950 ADGRF5Q8IZF2 1346 aa18.89■□□□□ 0.61
SEC22A-203ENST00000466950 PLEKHG1Q9ULL1 1385 aa18.89■□□□□ 0.61
SEC22A-203ENST00000466950 ALKQ9UM73 1620 aa18.89■□□□□ 0.61
SEC22A-203ENST00000466950 NBPF8Q3BBV2 869 aa18.88■□□□□ 0.61
SEC22A-203ENST00000466950 KDM2AQ9Y2K7 1162 aa18.88■□□□□ 0.61
SEC22A-203ENST00000466950 GPRASP1Q5JY77 1395 aa18.88■□□□□ 0.61
SEC22A-203ENST00000466950 MED14O60244 1454 aa18.88■□□□□ 0.61
SEC22A-203ENST00000466950 KNDC1Q76NI1 1749 aa18.86■□□□□ 0.61
SEC22A-203ENST00000466950 ADGRB1O14514 1584 aa18.86■□□□□ 0.61
SEC22A-203ENST00000466950 EID1Q9Y6B2 187 aa18.86■□□□□ 0.61
SEC22A-203ENST00000466950 STRCQ7RTU9 1775 aa18.86■□□□□ 0.61
SEC22A-203ENST00000466950 ASXL1Q8IXJ9 1541 aa18.85■□□□□ 0.61
SEC22A-203ENST00000466950 LTKP29376 864 aa18.82■□□□□ 0.6
SEC22A-203ENST00000466950 ARHGEF28Q8N1W1 1705 aaKnown RBP18.82■□□□□ 0.6
SEC22A-203ENST00000466950 ADAMTS13Q76LX8 1427 aa18.82■□□□□ 0.6
SEC22A-203ENST00000466950 ROCK2O75116 1388 aaKnown RBP18.81■□□□□ 0.6
SEC22A-203ENST00000466950 TXNDC2Q86VQ3 553 aa18.81■□□□□ 0.6
SEC22A-203ENST00000466950 ANKLE2Q86XL3 938 aa18.81■□□□□ 0.6
SEC22A-203ENST00000466950 C14orf93Q9H972 538 aaKnown RBP18.81■□□□□ 0.6
SEC22A-203ENST00000466950 CHD2O14647 1828 aaKnown RBP18.79■□□□□ 0.6
SEC22A-203ENST00000466950 NPHP4O75161 1426 aaPredicted RBP18.79■□□□□ 0.6
SEC22A-203ENST00000466950 XRN1Q8IZH2 1706 aaKnown RBP18.78■□□□□ 0.6
SEC22A-203ENST00000466950 NUTM2DQ5VT03 806 aaPredicted RBP18.78■□□□□ 0.6
SEC22A-203ENST00000466950 SENP3Q9H4L4 574 aaPredicted RBP18.77■□□□□ 0.6
SEC22A-203ENST00000466950 DLC1Q96QB1 1528 aa18.76■□□□□ 0.59
SEC22A-203ENST00000466950 CFAP70Q5T0N1 1121 aa18.76■□□□□ 0.59
SEC22A-203ENST00000466950 CPS1P31327 1500 aa18.75■□□□□ 0.59
SEC22A-203ENST00000466950 PIK3R4Q99570 1358 aa18.75■□□□□ 0.59
SEC22A-203ENST00000466950 NWD1Q149M9 1564 aa18.75■□□□□ 0.59
SEC22A-203ENST00000466950 TECPR2O15040 1411 aa18.74■□□□□ 0.59
SEC22A-203ENST00000466950 NBPF1Q3BBV0 1214 aa18.73■□□□□ 0.59
SEC22A-203ENST00000466950 YTHDC2Q9H6S0 1430 aaKnown RBP18.73■□□□□ 0.59
SEC22A-203ENST00000466950 QRICH2Q9H0J4 1663 aa18.73■□□□□ 0.59
SEC22A-203ENST00000466950 USP47Q96K76 1375 aa18.72■□□□□ 0.59
SEC22A-203ENST00000466950 CARD11Q9BXL7 1154 aa18.72■□□□□ 0.59
SEC22A-203ENST00000466950 TBX22Q9Y458 520 aa18.72■□□□□ 0.59
SEC22A-203ENST00000466950 EIF3AQ14152 1382 aaKnown RBP18.71■□□□□ 0.59
SEC22A-203ENST00000466950 LRPPRCP42704 1394 aaKnown RBP18.7■□□□□ 0.58
SEC22A-203ENST00000466950 HSPA2P54652 639 aa18.7■□□□□ 0.58
SEC22A-203ENST00000466950 METP08581 1390 aa18.69■□□□□ 0.58
SEC22A-203ENST00000466950 PTCH1Q13635 1447 aa18.68■□□□□ 0.58
SEC22A-203ENST00000466950 NCKAP5LQ9HCH0 1330 aa18.68■□□□□ 0.58
SEC22A-203ENST00000466950 ABCC11Q96J66 1382 aa18.68■□□□□ 0.58
SEC22A-203ENST00000466950 EIF4G2P78344 907 aaKnown RBP eCLIP18.67■□□□□ 0.58
SEC22A-203ENST00000466950 BCANQ96GW7 911 aa18.66■□□□□ 0.58
SEC22A-203ENST00000466950 SBNO2Q9Y2G9 1366 aa18.66■□□□□ 0.58
SEC22A-203ENST00000466950 FAM135BQ49AJ0 1406 aa18.66■□□□□ 0.58
SEC22A-203ENST00000466950 STRCP1A6NGW2 1772 aa18.65■□□□□ 0.58
SEC22A-203ENST00000466950 PTPRUQ92729 1446 aa18.65■□□□□ 0.58
SEC22A-203ENST00000466950 NKTRP30414 1462 aaKnown RBP18.65■□□□□ 0.58
SEC22A-203ENST00000466950 TMEM132EQ6IEE7 984 aa18.64■□□□□ 0.57
SEC22A-203ENST00000466950 SLC26A8Q96RN1 970 aa18.63■□□□□ 0.57
SEC22A-203ENST00000466950 ADGRB2O60241 1585 aa18.63■□□□□ 0.57
SEC22A-203ENST00000466950 HSPA5P11021 654 aaKnown RBP18.61■□□□□ 0.57
SEC22A-203ENST00000466950 SIRT1Q96EB6 747 aa18.61■□□□□ 0.57
SEC22A-203ENST00000466950 DMRT2Q9Y5R5 561 aa18.59■□□□□ 0.57
SEC22A-203ENST00000466950 CENPJQ9HC77 1338 aaPredicted RBP18.58■□□□□ 0.57
SEC22A-203ENST00000466950 NALCNQ8IZF0 1738 aa18.57■□□□□ 0.56
SEC22A-203ENST00000466950 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.57■□□□□ 0.56
SEC22A-203ENST00000466950 SLC24A1O60721 1099 aa18.57■□□□□ 0.56
SEC22A-203ENST00000466950 TRAK1Q9UPV9 953 aa18.57■□□□□ 0.56
SEC22A-203ENST00000466950 ROBO2Q9HCK4 1378 aa18.56■□□□□ 0.56
SEC22A-203ENST00000466950 ST20-MTHFSA0A0A6YYL1 179 aa18.56■□□□□ 0.56
SEC22A-203ENST00000466950 XIRP1Q702N8 1843 aaKnown RBP18.56■□□□□ 0.56
SEC22A-203ENST00000466950 KCNA6P17658 529 aa18.55■□□□□ 0.56
SEC22A-203ENST00000466950 TESK2Q96S53 571 aa18.55■□□□□ 0.56
SEC22A-203ENST00000466950 AMOTL2Q9Y2J4 779 aa18.55■□□□□ 0.56
SEC22A-203ENST00000466950 TULP4Q9NRJ4 1543 aa18.54■□□□□ 0.56
SEC22A-203ENST00000466950 STK26Q9P289 416 aa18.54■□□□□ 0.56
SEC22A-203ENST00000466950 CDC42BPGQ6DT37 1551 aa18.52■□□□□ 0.56
SEC22A-203ENST00000466950 PRAM1Q96QH2 718 aa18.52■□□□□ 0.56
SEC22A-203ENST00000466950 MYOM1P52179 1685 aa18.51■□□□□ 0.55
SEC22A-203ENST00000466950 ZNF316A6NFI3 1004 aaPredicted RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 153.6 ms