RNA–Protein interactions for RNA: ENST00000466708.5

CCDC78-207, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-207ENST00000466708 EIF3AQ14152 1382 aaKnown RBP28.06■■■□□ 2.08
CCDC78-207ENST00000466708 DISP3Q9P2K9 1392 aa28.06■■■□□ 2.08
CCDC78-207ENST00000466708 CCDC184Q52MB2 194 aa28.06■■■□□ 2.08
CCDC78-207ENST00000466708 KIF13AQ9H1H9 1805 aa28.06■■■□□ 2.08
CCDC78-207ENST00000466708 SIGLEC1Q9BZZ2 1709 aa28.05■■■□□ 2.08
CCDC78-207ENST00000466708 PIK3C2BO00750 1634 aa28.05■■■□□ 2.08
CCDC78-207ENST00000466708 ADGRF5Q8IZF2 1346 aa28.04■■■□□ 2.08
CCDC78-207ENST00000466708 AGLP35573 1532 aa28.03■■■□□ 2.08
CCDC78-207ENST00000466708 PPLO60437 1756 aa28.03■■■□□ 2.08
CCDC78-207ENST00000466708 SYNMO15061 1565 aa28.02■■■□□ 2.08
CCDC78-207ENST00000466708 SLC24A1O60721 1099 aa28.02■■■□□ 2.08
CCDC78-207ENST00000466708 CHGAP10645 457 aaKnown RBP28.02■■■□□ 2.08
CCDC78-207ENST00000466708 PPP6R1Q9UPN7 881 aa28.02■■■□□ 2.08
CCDC78-207ENST00000466708 HNRNPUQ00839 825 aaKnown RBP eCLIP27.99■■■□□ 2.07
CCDC78-207ENST00000466708 RALBP1Q15311 655 aa27.99■■■□□ 2.07
CCDC78-207ENST00000466708 CDCA8Q53HL2 280 aa27.99■■■□□ 2.07
CCDC78-207ENST00000466708 CFAP70Q5T0N1 1121 aa27.99■■■□□ 2.07
CCDC78-207ENST00000466708 SLC52A1Q9NWF4 448 aa27.98■■■□□ 2.07
CCDC78-207ENST00000466708 SETBP1Q9Y6X0 1596 aa27.98■■■□□ 2.07
CCDC78-207ENST00000466708 PIK3C2GO75747 1445 aa27.95■■■□□ 2.06
CCDC78-207ENST00000466708 PER1O15534 1290 aaPredicted RBP27.95■■■□□ 2.06
CCDC78-207ENST00000466708 PREX1Q8TCU6 1659 aa27.94■■■□□ 2.06
CCDC78-207ENST00000466708 FAM9BQ8IZU0 186 aa27.93■■■□□ 2.06
CCDC78-207ENST00000466708 MYBBP1AQ9BQG0 1328 aaKnown RBP27.91■■■□□ 2.06
CCDC78-207ENST00000466708 C14orf93Q9H972 538 aaKnown RBP27.91■■■□□ 2.06
CCDC78-207ENST00000466708 ARHGEF40Q8TER5 1519 aa27.89■■■□□ 2.06
CCDC78-207ENST00000466708 VGFO15240 615 aaPredicted RBP27.89■■■□□ 2.06
CCDC78-207ENST00000466708 MYO3AQ8NEV4 1616 aa27.88■■■□□ 2.05
CCDC78-207ENST00000466708 IDI1Q13907 227 aa27.88■■■□□ 2.05
CCDC78-207ENST00000466708 BRD4O60885 1362 aaPredicted RBP27.88■■■□□ 2.05
CCDC78-207ENST00000466708 PARD3Q8TEW0 1356 aa27.88■■■□□ 2.05
CCDC78-207ENST00000466708 PANK3Q9H999 370 aa27.88■■■□□ 2.05
CCDC78-207ENST00000466708 NEXMIFQ5QGS0 1516 aa27.87■■■□□ 2.05
CCDC78-207ENST00000466708 CNGB1Q14028 1251 aaPredicted RBP27.87■■■□□ 2.05
CCDC78-207ENST00000466708 SBNO2Q9Y2G9 1366 aa27.86■■■□□ 2.05
CCDC78-207ENST00000466708 TMC1Q8TDI8 760 aa27.85■■■□□ 2.05
CCDC78-207ENST00000466708 ZFYVE9O95405 1425 aa27.85■■■□□ 2.05
CCDC78-207ENST00000466708 ADGRB1O14514 1584 aa27.83■■■□□ 2.05
CCDC78-207ENST00000466708 ERVK-7P63135 1459 aa27.83■■■□□ 2.05
CCDC78-207ENST00000466708 KDM5AP29375 1690 aaKnown RBP27.82■■■□□ 2.04
CCDC78-207ENST00000466708 ZBED9Q6R2W3 1325 aa27.82■■■□□ 2.04
CCDC78-207ENST00000466708 TMEM131LA2VDJ0 1609 aa27.81■■■□□ 2.04
CCDC78-207ENST00000466708 PNISRQ8TF01 805 aaKnown RBP27.81■■■□□ 2.04
CCDC78-207ENST00000466708 NLRP13Q86W25 1043 aa27.8■■■□□ 2.04
CCDC78-207ENST00000466708 SUPT16HQ9Y5B9 1047 aaKnown RBP27.8■■■□□ 2.04
CCDC78-207ENST00000466708 CLTCQ00610 1675 aaKnown RBP27.79■■■□□ 2.04
CCDC78-207ENST00000466708 CENPJQ9HC77 1338 aaPredicted RBP27.78■■■□□ 2.04
CCDC78-207ENST00000466708 MYOM1P52179 1685 aa27.75■■■□□ 2.03
CCDC78-207ENST00000466708 MYO5BQ9ULV0 1848 aa27.75■■■□□ 2.03
CCDC78-207ENST00000466708 FBXO31Q5XUX0 539 aaPredicted RBP27.75■■■□□ 2.03
CCDC78-207ENST00000466708 KNSTRNQ9Y448 316 aa27.74■■■□□ 2.03
CCDC78-207ENST00000466708 SPATA31D1Q6ZQQ2 1576 aa27.74■■■□□ 2.03
CCDC78-207ENST00000466708 LRPPRCP42704 1394 aaKnown RBP27.73■■■□□ 2.03
CCDC78-207ENST00000466708 TRAK1Q9UPV9 953 aa27.71■■■□□ 2.03
CCDC78-207ENST00000466708 NEFLP07196 543 aa27.7■■■□□ 2.02
CCDC78-207ENST00000466708 CC2D1BQ5T0F9 858 aaKnown RBP27.7■■■□□ 2.02
CCDC78-207ENST00000466708 NPC1L1Q9UHC9 1359 aa27.69■■■□□ 2.02
CCDC78-207ENST00000466708 QRICH2Q9H0J4 1663 aa27.69■■■□□ 2.02
CCDC78-207ENST00000466708 TMEM132EQ6IEE7 984 aa27.69■■■□□ 2.02
CCDC78-207ENST00000466708 ASXL1Q8IXJ9 1541 aa27.67■■■□□ 2.02
CCDC78-207ENST00000466708 MLECQ14165 292 aa27.67■■■□□ 2.02
CCDC78-207ENST00000466708 NUTM2DQ5VT03 806 aaPredicted RBP27.67■■■□□ 2.02
CCDC78-207ENST00000466708 ESF1Q9H501 851 aaKnown RBP27.66■■■□□ 2.02
CCDC78-207ENST00000466708 AMER1Q5JTC6 1135 aaPredicted RBP27.65■■■□□ 2.02
CCDC78-207ENST00000466708 STAG3Q9UJ98 1225 aa27.64■■■□□ 2.02
CCDC78-207ENST00000466708 ARHGEF28Q8N1W1 1705 aaKnown RBP27.64■■■□□ 2.01
CCDC78-207ENST00000466708 FKBP8Q14318 412 aa27.62■■■□□ 2.01
CCDC78-207ENST00000466708 PUS7Q96PZ0 661 aaKnown RBP27.62■■■□□ 2.01
CCDC78-207ENST00000466708 INSRP06213 1382 aa27.62■■■□□ 2.01
CCDC78-207ENST00000466708 ZMYM3Q14202 1370 aa27.6■■■□□ 2.01
CCDC78-207ENST00000466708 A2ML1A8K2U0 1454 aa27.6■■■□□ 2.01
CCDC78-207ENST00000466708 EVC2Q86UK5 1308 aa27.55■■■□□ 2
CCDC78-207ENST00000466708 ALKQ9UM73 1620 aa27.54■■■□□ 2
CCDC78-207ENST00000466708 PPP2R1AP30153 589 aa27.53■■■□□ 2
CCDC78-207ENST00000466708 SMG6Q86US8 1419 aaKnown RBP27.52■■■□□ 2
CCDC78-207ENST00000466708 RIMS2Q9UQ26 1411 aa27.52■■■□□ 2
CCDC78-207ENST00000466708 YTHDC2Q9H6S0 1430 aaKnown RBP27.51■■□□□ 1.99
CCDC78-207ENST00000466708 CARD14Q9BXL6 1004 aa27.49■■□□□ 1.99
CCDC78-207ENST00000466708 TULP4Q9NRJ4 1543 aa27.49■■□□□ 1.99
CCDC78-207ENST00000466708 PELP1Q8IZL8 1130 aaKnown RBP27.48■■□□□ 1.99
CCDC78-207ENST00000466708 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.48■■□□□ 1.99
CCDC78-207ENST00000466708 PTPRMP28827 1452 aa27.48■■□□□ 1.99
CCDC78-207ENST00000466708 TNRQ92752 1358 aa27.47■■□□□ 1.99
CCDC78-207ENST00000466708 STK26Q9P289 416 aa27.46■■□□□ 1.99
CCDC78-207ENST00000466708 NUDCQ9Y266 331 aa27.46■■□□□ 1.99
CCDC78-207ENST00000466708 BLMP54132 1417 aaPredicted RBP27.45■■□□□ 1.99
CCDC78-207ENST00000466708 HDGFP51858 240 aaKnown RBP27.45■■□□□ 1.98
CCDC78-207ENST00000466708 ERICH6BQ5W0A0 696 aa27.44■■□□□ 1.98
CCDC78-207ENST00000466708 NINLQ9Y2I6 1382 aa27.43■■□□□ 1.98
CCDC78-207ENST00000466708 SLC12A5Q9H2X9 1139 aa27.43■■□□□ 1.98
CCDC78-207ENST00000466708 USP32Q8NFA0 1604 aa27.42■■□□□ 1.98
CCDC78-207ENST00000466708 DLC1Q96QB1 1528 aa27.41■■□□□ 1.98
CCDC78-207ENST00000466708 NSD3Q9BZ95 1437 aa27.4■■□□□ 1.98
CCDC78-207ENST00000466708 POGKQ9P215 609 aa27.4■■□□□ 1.98
CCDC78-207ENST00000466708 SETD1AO15047 1707 aaKnown RBP27.4■■□□□ 1.98
CCDC78-207ENST00000466708 PDE3BQ13370 1112 aa27.39■■□□□ 1.98
CCDC78-207ENST00000466708 PRAM1Q96QH2 718 aa27.39■■□□□ 1.98
CCDC78-207ENST00000466708 ANKRD36BQ8N2N9 1353 aa27.38■■□□□ 1.97
CCDC78-207ENST00000466708 WDR43Q15061 677 aaKnown RBP eCLIP27.37■■□□□ 1.97
CCDC78-207ENST00000466708 BCANQ96GW7 911 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms