RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 MYO5BQ9ULV0 1848 aa17.17■□□□□ 0.34
VPS16-206ENST00000466415 MYO3AQ8NEV4 1616 aa17.17■□□□□ 0.34
VPS16-206ENST00000466415 KDM5AP29375 1690 aaKnown RBP17.16■□□□□ 0.34
VPS16-206ENST00000466415 NRXN1Q9ULB1 1477 aa17.14■□□□□ 0.33
VPS16-206ENST00000466415 UBR1Q8IWV7 1749 aa17.14■□□□□ 0.33
VPS16-206ENST00000466415 VGFO15240 615 aaPredicted RBP17.14■□□□□ 0.33
VPS16-206ENST00000466415 EIF4G2P78344 907 aaKnown RBP eCLIP17.14■□□□□ 0.33
VPS16-206ENST00000466415 CARD11Q9BXL7 1154 aa17.14■□□□□ 0.33
VPS16-206ENST00000466415 ADGRF5Q8IZF2 1346 aa17.14■□□□□ 0.33
VPS16-206ENST00000466415 RIMS2Q9UQ26 1411 aa17.13■□□□□ 0.33
VPS16-206ENST00000466415 PTPRMP28827 1452 aa17.13■□□□□ 0.33
VPS16-206ENST00000466415 KIAA1210Q9ULL0 1709 aa17.13■□□□□ 0.33
VPS16-206ENST00000466415 LAMC1P11047 1609 aa17.12■□□□□ 0.33
VPS16-206ENST00000466415 PIK3C2GO75747 1445 aa17.12■□□□□ 0.33
VPS16-206ENST00000466415 ZFYVE9O95405 1425 aa17.12■□□□□ 0.33
VPS16-206ENST00000466415 NUTM2DQ5VT03 806 aaPredicted RBP17.11■□□□□ 0.33
VPS16-206ENST00000466415 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.11■□□□□ 0.33
VPS16-206ENST00000466415 CEP170BQ9Y4F5 1589 aaPredicted RBP17.11■□□□□ 0.33
VPS16-206ENST00000466415 HDGFP51858 240 aaKnown RBP17.1■□□□□ 0.33
VPS16-206ENST00000466415 GPRASP1Q5JY77 1395 aa17.1■□□□□ 0.33
VPS16-206ENST00000466415 USP47Q96K76 1375 aa17.1■□□□□ 0.33
VPS16-206ENST00000466415 HSPA5P11021 654 aaKnown RBP17.09■□□□□ 0.33
VPS16-206ENST00000466415 TMEM2Q9UHN6 1383 aa17.08■□□□□ 0.32
VPS16-206ENST00000466415 ZNF142P52746 1687 aaPredicted RBP17.07■□□□□ 0.32
VPS16-206ENST00000466415 NBPF1Q3BBV0 1214 aa17.07■□□□□ 0.32
VPS16-206ENST00000466415 CFAP70Q5T0N1 1121 aa17.06■□□□□ 0.32
VPS16-206ENST00000466415 THEMISQ8N1K5 641 aaPredicted RBP17.06■□□□□ 0.32
VPS16-206ENST00000466415 HIRIP3Q9BW71 556 aaPredicted RBP17.06■□□□□ 0.32
VPS16-206ENST00000466415 SETBP1Q9Y6X0 1596 aa17.05■□□□□ 0.32
VPS16-206ENST00000466415 EID1Q9Y6B2 187 aa17.04■□□□□ 0.32
VPS16-206ENST00000466415 SLIT1O75093 1534 aa17.04■□□□□ 0.32
VPS16-206ENST00000466415 SCAF11Q99590 1463 aaKnown RBP17.04■□□□□ 0.32
VPS16-206ENST00000466415 EIF3AQ14152 1382 aaKnown RBP17.03■□□□□ 0.32
VPS16-206ENST00000466415 C14orf93Q9H972 538 aaKnown RBP17.03■□□□□ 0.32
VPS16-206ENST00000466415 IQGAP1P46940 1657 aa17.02■□□□□ 0.32
VPS16-206ENST00000466415 ARHGAP23Q9P227 1491 aa17.02■□□□□ 0.32
VPS16-206ENST00000466415 BCANQ96GW7 911 aa17.02■□□□□ 0.32
VPS16-206ENST00000466415 SENP3Q9H4L4 574 aaPredicted RBP17.01■□□□□ 0.31
VPS16-206ENST00000466415 TXNDC2Q86VQ3 553 aa17■□□□□ 0.31
VPS16-206ENST00000466415 ALKQ9UM73 1620 aa16.99■□□□□ 0.31
VPS16-206ENST00000466415 ADGRB1O14514 1584 aa16.99■□□□□ 0.31
VPS16-206ENST00000466415 SETD1BQ9UPS6 1966 aaKnown RBP16.99■□□□□ 0.31
VPS16-206ENST00000466415 PLEKHG1Q9ULL1 1385 aa16.99■□□□□ 0.31
VPS16-206ENST00000466415 KDM4FA0A1W2PPD8 638 aa16.98■□□□□ 0.31
VPS16-206ENST00000466415 ST20-MTHFSA0A0A6YYL1 179 aa16.97■□□□□ 0.31
VPS16-206ENST00000466415 NRXN3Q9Y4C0 1643 aa16.96■□□□□ 0.3
VPS16-206ENST00000466415 ASXL1Q8IXJ9 1541 aa16.96■□□□□ 0.3
VPS16-206ENST00000466415 LTKP29376 864 aa16.95■□□□□ 0.3
VPS16-206ENST00000466415 TMEM132EQ6IEE7 984 aa16.95■□□□□ 0.3
VPS16-206ENST00000466415 ANKLE2Q86XL3 938 aa16.93■□□□□ 0.3
VPS16-206ENST00000466415 TRAK1Q9UPV9 953 aa16.93■□□□□ 0.3
VPS16-206ENST00000466415 DIP2AQ14689 1571 aa16.93■□□□□ 0.3
VPS16-206ENST00000466415 SETD1AO15047 1707 aaKnown RBP16.93■□□□□ 0.3
VPS16-206ENST00000466415 DIEXFQ68CQ4 756 aaKnown RBP16.92■□□□□ 0.3
VPS16-206ENST00000466415 YTHDC2Q9H6S0 1430 aaKnown RBP16.92■□□□□ 0.3
VPS16-206ENST00000466415 POLR1AO95602 1720 aaPredicted RBP16.92■□□□□ 0.3
VPS16-206ENST00000466415 STK26Q9P289 416 aa16.91■□□□□ 0.3
VPS16-206ENST00000466415 CCDC7Q96M83 1385 aa16.9■□□□□ 0.3
VPS16-206ENST00000466415 ADAMTS13Q76LX8 1427 aa16.9■□□□□ 0.3
VPS16-206ENST00000466415 TMF1P82094 1093 aa16.9■□□□□ 0.3
VPS16-206ENST00000466415 POLR3GLQ9BT43 218 aa16.9■□□□□ 0.3
VPS16-206ENST00000466415 CENPJQ9HC77 1338 aaPredicted RBP16.9■□□□□ 0.3
VPS16-206ENST00000466415 ARHGEF28Q8N1W1 1705 aaKnown RBP16.9■□□□□ 0.3
VPS16-206ENST00000466415 LRPPRCP42704 1394 aaKnown RBP16.89■□□□□ 0.3
VPS16-206ENST00000466415 WASHC2AQ641Q2 1341 aa16.89■□□□□ 0.29
VPS16-206ENST00000466415 SLC24A1O60721 1099 aa16.88■□□□□ 0.29
VPS16-206ENST00000466415 KIF7Q2M1P5 1343 aa16.88■□□□□ 0.29
VPS16-206ENST00000466415 QRICH2Q9H0J4 1663 aa16.88■□□□□ 0.29
VPS16-206ENST00000466415 METP08581 1390 aa16.87■□□□□ 0.29
VPS16-206ENST00000466415 DLC1Q96QB1 1528 aa16.86■□□□□ 0.29
VPS16-206ENST00000466415 DDX10Q13206 875 aaKnown RBP16.86■□□□□ 0.29
VPS16-206ENST00000466415 SLC26A8Q96RN1 970 aa16.86■□□□□ 0.29
VPS16-206ENST00000466415 TESK2Q96S53 571 aa16.86■□□□□ 0.29
VPS16-206ENST00000466415 KNDC1Q76NI1 1749 aa16.86■□□□□ 0.29
VPS16-206ENST00000466415 NPHP4O75161 1426 aaPredicted RBP16.86■□□□□ 0.29
VPS16-206ENST00000466415 MED14O60244 1454 aa16.86■□□□□ 0.29
VPS16-206ENST00000466415 C11orf95C9JLR9 678 aaPredicted RBP16.85■□□□□ 0.29
VPS16-206ENST00000466415 CDCA8Q53HL2 280 aa16.85■□□□□ 0.29
VPS16-206ENST00000466415 POGKQ9P215 609 aa16.85■□□□□ 0.29
VPS16-206ENST00000466415 TBX22Q9Y458 520 aa16.85■□□□□ 0.29
VPS16-206ENST00000466415 SBNO2Q9Y2G9 1366 aa16.85■□□□□ 0.29
VPS16-206ENST00000466415 DISP3Q9P2K9 1392 aa16.84■□□□□ 0.29
VPS16-206ENST00000466415 CPS1P31327 1500 aa16.83■□□□□ 0.28
VPS16-206ENST00000466415 ABCC11Q96J66 1382 aa16.83■□□□□ 0.28
VPS16-206ENST00000466415 LMTK3Q96Q04 1460 aa16.82■□□□□ 0.28
VPS16-206ENST00000466415 TECPR2O15040 1411 aa16.82■□□□□ 0.28
VPS16-206ENST00000466415 PRAM1Q96QH2 718 aa16.82■□□□□ 0.28
VPS16-206ENST00000466415 PIK3R4Q99570 1358 aa16.81■□□□□ 0.28
VPS16-206ENST00000466415 NCKAP5LQ9HCH0 1330 aa16.81■□□□□ 0.28
VPS16-206ENST00000466415 SAFB2Q14151 953 aaKnown RBP eCLIP16.81■□□□□ 0.28
VPS16-206ENST00000466415 FAM135BQ49AJ0 1406 aa16.79■□□□□ 0.28
VPS16-206ENST00000466415 HSPA2P54652 639 aa16.79■□□□□ 0.28
VPS16-206ENST00000466415 EVC2Q86UK5 1308 aa16.78■□□□□ 0.28
VPS16-206ENST00000466415 PTPRUQ92729 1446 aa16.78■□□□□ 0.28
VPS16-206ENST00000466415 SIRT1Q96EB6 747 aa16.77■□□□□ 0.28
VPS16-206ENST00000466415 AMOTL2Q9Y2J4 779 aa16.77■□□□□ 0.28
VPS16-206ENST00000466415 PTCH1Q13635 1447 aa16.77■□□□□ 0.27
VPS16-206ENST00000466415 XRN1Q8IZH2 1706 aaKnown RBP16.76■□□□□ 0.27
VPS16-206ENST00000466415 MINK1Q8N4C8 1332 aaPredicted RBP16.76■□□□□ 0.27
VPS16-206ENST00000466415 PLEKHH1Q9ULM0 1364 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms