RNA–Protein interactions for RNA: ENST00000465966.4

DDR1-242, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 268 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-242ENST00000465966 ZNF772Q68DY9 489 aaPredicted RBP13.26□□□□□ -0.29
DDR1-242ENST00000465966 CFAP65Q6ZU64 1925 aaKnown RBP13.25□□□□□ -0.29
DDR1-242ENST00000465966 XIRP1Q702N8 1843 aaKnown RBP13.25□□□□□ -0.29
DDR1-242ENST00000465966 KDM5AP29375 1690 aaKnown RBP13.25□□□□□ -0.29
DDR1-242ENST00000465966 SPATA31A6Q5VVP1 1343 aa13.25□□□□□ -0.29
DDR1-242ENST00000465966 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.25□□□□□ -0.29
DDR1-242ENST00000465966 NCOA3Q9Y6Q9 1424 aa13.24□□□□□ -0.29
DDR1-242ENST00000465966 PLEKHG1Q9ULL1 1385 aa13.24□□□□□ -0.29
DDR1-242ENST00000465966 CADPS2Q86UW7 1296 aa13.24□□□□□ -0.29
DDR1-242ENST00000465966 TBX22Q9Y458 520 aa13.24□□□□□ -0.29
DDR1-242ENST00000465966 ADGRB3O60242 1522 aa13.23□□□□□ -0.29
DDR1-242ENST00000465966 ATF3P18847 181 aa13.23□□□□□ -0.29
DDR1-242ENST00000465966 PTPN23Q9H3S7 1636 aa13.23□□□□□ -0.29
DDR1-242ENST00000465966 FGD6Q6ZV73 1430 aa13.22□□□□□ -0.29
DDR1-242ENST00000465966 C19orf44Q9H6X5 657 aa13.22□□□□□ -0.29
DDR1-242ENST00000465966 NWD1Q149M9 1564 aa13.22□□□□□ -0.29
DDR1-242ENST00000465966 RIMS2Q9UQ26 1411 aa13.22□□□□□ -0.29
DDR1-242ENST00000465966 CHGAP10645 457 aaKnown RBP13.21□□□□□ -0.29
DDR1-242ENST00000465966 RPRD2Q5VT52 1461 aaKnown RBP13.21□□□□□ -0.3
DDR1-242ENST00000465966 RXRBP28702 533 aa13.2□□□□□ -0.3
DDR1-242ENST00000465966 UPF1Q92900 1129 aaKnown RBP eCLIP13.2□□□□□ -0.3
DDR1-242ENST00000465966 TRIM52Q96A61 297 aa13.2□□□□□ -0.3
DDR1-242ENST00000465966 ZFYVE9O95405 1425 aa13.2□□□□□ -0.3
DDR1-242ENST00000465966 CROCC2H7BZ55 1655 aa13.19□□□□□ -0.3
DDR1-242ENST00000465966 PHLPP1O60346 1717 aa13.19□□□□□ -0.3
DDR1-242ENST00000465966 FAM50AQ14320 339 aaKnown RBP13.18□□□□□ -0.3
DDR1-242ENST00000465966 ANKRD50Q9ULJ7 1429 aa13.18□□□□□ -0.3
DDR1-242ENST00000465966 PIK3R4Q99570 1358 aa13.17□□□□□ -0.3
DDR1-242ENST00000465966 NUTM2BA6NNL0 878 aaPredicted RBP13.16□□□□□ -0.3
DDR1-242ENST00000465966 NUTM2EB1AL46 878 aaPredicted RBP13.16□□□□□ -0.3
DDR1-242ENST00000465966 NUTM2DQ5VT03 806 aaPredicted RBP13.16□□□□□ -0.3
DDR1-242ENST00000465966 NUTM2AQ8IVF1 878 aaPredicted RBP13.16□□□□□ -0.3
DDR1-242ENST00000465966 ADGRL2O95490 1459 aa13.16□□□□□ -0.3
DDR1-242ENST00000465966 LRP6O75581 1613 aa13.15□□□□□ -0.3
DDR1-242ENST00000465966 COL16A1Q07092 1604 aaPredicted RBP13.14□□□□□ -0.31
DDR1-242ENST00000465966 BRINP3Q76B58 766 aa13.14□□□□□ -0.31
DDR1-242ENST00000465966 AMOTL2Q9Y2J4 779 aa13.14□□□□□ -0.31
DDR1-242ENST00000465966 ADAMTS13Q76LX8 1427 aa13.13□□□□□ -0.31
DDR1-242ENST00000465966 SETD1AO15047 1707 aaKnown RBP13.12□□□□□ -0.31
DDR1-242ENST00000465966 AHDC1Q5TGY3 1603 aaPredicted RBP13.11□□□□□ -0.31
DDR1-242ENST00000465966 LRRC59Q96AG4 307 aaKnown RBP13.11□□□□□ -0.31
DDR1-242ENST00000465966 AFF2P51816 1311 aa13.11□□□□□ -0.31
DDR1-242ENST00000465966 DIP2AQ14689 1571 aa13.1□□□□□ -0.31
DDR1-242ENST00000465966 CDK12Q9NYV4 1490 aaPredicted RBP13.1□□□□□ -0.31
DDR1-242ENST00000465966 TMEM131LA2VDJ0 1609 aa13.1□□□□□ -0.31
DDR1-242ENST00000465966 CHD2O14647 1828 aaKnown RBP13.09□□□□□ -0.31
DDR1-242ENST00000465966 DCCP43146 1447 aa13.09□□□□□ -0.31
DDR1-242ENST00000465966 C8orf37Q96NL8 207 aa13.08□□□□□ -0.32
DDR1-242ENST00000465966 QTRT2Q9H974 415 aaKnown RBP13.08□□□□□ -0.32
DDR1-242ENST00000465966 TRPM2O94759 1503 aa13.08□□□□□ -0.32
DDR1-242ENST00000465966 SETD5Q9C0A6 1442 aa13.07□□□□□ -0.32
DDR1-242ENST00000465966 RBM6P78332 1123 aaKnown RBP13.07□□□□□ -0.32
DDR1-242ENST00000465966 SHPRHQ149N8 1683 aa13.06□□□□□ -0.32
DDR1-242ENST00000465966 GCC2Q8IWJ2 1684 aa13.06□□□□□ -0.32
DDR1-242ENST00000465966 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.06□□□□□ -0.32
DDR1-242ENST00000465966 FOXD1Q16676 465 aa13.06□□□□□ -0.32
DDR1-242ENST00000465966 ZNF326Q5BKZ1 582 aaKnown RBP13.06□□□□□ -0.32
DDR1-242ENST00000465966 PPARGC1BQ86YN6 1023 aaKnown RBP13.06□□□□□ -0.32
DDR1-242ENST00000465966 NUP155O75694 1391 aa13.06□□□□□ -0.32
DDR1-242ENST00000465966 PTPRUQ92729 1446 aa13.05□□□□□ -0.32
DDR1-242ENST00000465966 NGLY1Q96IV0 654 aa13.05□□□□□ -0.32
DDR1-242ENST00000465966 ASXL1Q8IXJ9 1541 aa13.04□□□□□ -0.32
DDR1-242ENST00000465966 ROCK1Q13464 1354 aa13.03□□□□□ -0.32
DDR1-242ENST00000465966 MST1RQ04912 1400 aa13.03□□□□□ -0.32
DDR1-242ENST00000465966 PNPLA6Q8IY17 1366 aa13.02□□□□□ -0.33
DDR1-242ENST00000465966 ADAMTS2O95450 1211 aa13.01□□□□□ -0.33
DDR1-242ENST00000465966 DDX17Q92841 729 aaKnown RBP13.01□□□□□ -0.33
DDR1-242ENST00000465966 UNC13BO14795 1591 aa13.01□□□□□ -0.33
DDR1-242ENST00000465966 RGS12O14924 1447 aa13□□□□□ -0.33
DDR1-242ENST00000465966 METP08581 1390 aa13□□□□□ -0.33
DDR1-242ENST00000465966 MYO5BQ9ULV0 1848 aa12.99□□□□□ -0.33
DDR1-242ENST00000465966 ADGRL3Q9HAR2 1447 aa12.99□□□□□ -0.33
DDR1-242ENST00000465966 ATAD2Q6PL18 1390 aa12.99□□□□□ -0.33
DDR1-242ENST00000465966 USP21Q9UK80 565 aa12.99□□□□□ -0.33
DDR1-242ENST00000465966 TRPC5Q9UL62 973 aaPredicted RBP12.99□□□□□ -0.33
DDR1-242ENST00000465966 E9PCH4 1651 aa12.99□□□□□ -0.33
DDR1-242ENST00000465966 ITGAEP38570 1179 aa12.98□□□□□ -0.33
DDR1-242ENST00000465966 SETBP1Q9Y6X0 1596 aa12.98□□□□□ -0.33
DDR1-242ENST00000465966 ZRANB1Q9UGI0 708 aa12.97□□□□□ -0.33
DDR1-242ENST00000465966 IQGAP3Q86VI3 1631 aa12.97□□□□□ -0.33
DDR1-242ENST00000465966 TRIM26Q12899 539 aaPredicted RBP12.96□□□□□ -0.33
DDR1-242ENST00000465966 C1orf167Q5SNV9 1468 aa12.96□□□□□ -0.34
DDR1-242ENST00000465966 VGFO15240 615 aaPredicted RBP12.95□□□□□ -0.34
DDR1-242ENST00000465966 SOS2Q07890 1332 aaPredicted RBP12.94□□□□□ -0.34
DDR1-242ENST00000465966 XRN1Q8IZH2 1706 aaKnown RBP12.94□□□□□ -0.34
DDR1-242ENST00000465966 CCDC125Q86Z20 511 aa12.94□□□□□ -0.34
DDR1-242ENST00000465966 FNBP4Q8N3X1 1017 aaPredicted RBP12.94□□□□□ -0.34
DDR1-242ENST00000465966 ORAI2Q96SN7 254 aa12.94□□□□□ -0.34
DDR1-242ENST00000465966 NHSL1Q5SYE7 1610 aa12.94□□□□□ -0.34
DDR1-242ENST00000465966 PTCH1Q13635 1447 aa12.93□□□□□ -0.34
DDR1-242ENST00000465966 PCGF6Q9BYE7 350 aa12.92□□□□□ -0.34
DDR1-242ENST00000465966 NRXN3Q9Y4C0 1643 aa12.91□□□□□ -0.34
DDR1-242ENST00000465966 NPHP3Q7Z494 1330 aa12.9□□□□□ -0.34
DDR1-242ENST00000465966 ESCO1Q5FWF5 840 aa12.89□□□□□ -0.35
DDR1-242ENST00000465966 ROBO2Q9HCK4 1378 aa12.89□□□□□ -0.35
DDR1-242ENST00000465966 RPGRIP1LQ68CZ1 1315 aa12.88□□□□□ -0.35
DDR1-242ENST00000465966 ATRNO75882 1429 aa12.88□□□□□ -0.35
DDR1-242ENST00000465966 NEXMIFQ5QGS0 1516 aa12.88□□□□□ -0.35
DDR1-242ENST00000465966 HFM1A2PYH4 1435 aa12.88□□□□□ -0.35
DDR1-242ENST00000465966 LRPPRCP42704 1394 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms