RNA–Protein interactions for RNA: ENST00000465941.1

HOXA9-203, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-203ENST00000465941 POLR1AO95602 1720 aaPredicted RBP26.97■■□□□ 1.91
HOXA9-203ENST00000465941 MYO5BQ9ULV0 1848 aa26.96■■□□□ 1.91
HOXA9-203ENST00000465941 ZNF326Q5BKZ1 582 aaKnown RBP26.96■■□□□ 1.91
HOXA9-203ENST00000465941 NPHP4O75161 1426 aaPredicted RBP26.96■■□□□ 1.91
HOXA9-203ENST00000465941 KIF1BO60333 1816 aa26.94■■□□□ 1.9
HOXA9-203ENST00000465941 RPGRIP1LQ68CZ1 1315 aa26.92■■□□□ 1.9
HOXA9-203ENST00000465941 SPATA31E1Q6ZUB1 1445 aa26.92■■□□□ 1.9
HOXA9-203ENST00000465941 ILDR1Q86SU0 546 aaPredicted RBP26.92■■□□□ 1.9
HOXA9-203ENST00000465941 DHX57Q6P158 1386 aaKnown RBP26.92■■□□□ 1.9
HOXA9-203ENST00000465941 PPP1R15AO75807 674 aaPredicted RBP26.9■■□□□ 1.9
HOXA9-203ENST00000465941 PLEKHG1Q9ULL1 1385 aa26.88■■□□□ 1.89
HOXA9-203ENST00000465941 RGL3Q3MIN7 710 aa26.88■■□□□ 1.89
HOXA9-203ENST00000465941 NUTM2DQ5VT03 806 aaPredicted RBP26.88■■□□□ 1.89
HOXA9-203ENST00000465941 IQGAP1P46940 1657 aa26.87■■□□□ 1.89
HOXA9-203ENST00000465941 NEXMIFQ5QGS0 1516 aa26.85■■□□□ 1.89
HOXA9-203ENST00000465941 VGFO15240 615 aaPredicted RBP26.85■■□□□ 1.89
HOXA9-203ENST00000465941 BCANQ96GW7 911 aa26.82■■□□□ 1.88
HOXA9-203ENST00000465941 SLC26A8Q96RN1 970 aa26.8■■□□□ 1.88
HOXA9-203ENST00000465941 TBX22Q9Y458 520 aa26.78■■□□□ 1.88
HOXA9-203ENST00000465941 ZNF335Q9H4Z2 1342 aaPredicted RBP26.78■■□□□ 1.88
HOXA9-203ENST00000465941 SENP3Q9H4L4 574 aaPredicted RBP26.76■■□□□ 1.87
HOXA9-203ENST00000465941 ADAMTS13Q76LX8 1427 aa26.75■■□□□ 1.87
HOXA9-203ENST00000465941 PPLO60437 1756 aa26.74■■□□□ 1.87
HOXA9-203ENST00000465941 SIN3AQ96ST3 1273 aa26.74■■□□□ 1.87
HOXA9-203ENST00000465941 SETBP1Q9Y6X0 1596 aa26.74■■□□□ 1.87
HOXA9-203ENST00000465941 ADGRF5Q8IZF2 1346 aa26.72■■□□□ 1.87
HOXA9-203ENST00000465941 STAC3Q96MF2 364 aa26.72■■□□□ 1.87
HOXA9-203ENST00000465941 LTBP4Q8N2S1 1624 aa26.71■■□□□ 1.87
HOXA9-203ENST00000465941 DIP2AQ14689 1571 aa26.7■■□□□ 1.86
HOXA9-203ENST00000465941 IFT172Q9UG01 1749 aa26.7■■□□□ 1.86
HOXA9-203ENST00000465941 NRXN3Q9Y4C0 1643 aa26.68■■□□□ 1.86
HOXA9-203ENST00000465941 KCNA6P17658 529 aa26.68■■□□□ 1.86
HOXA9-203ENST00000465941 NEUROD1Q13562 356 aa26.68■■□□□ 1.86
HOXA9-203ENST00000465941 DCAF11Q8TEB1 546 aa26.68■■□□□ 1.86
HOXA9-203ENST00000465941 MYOM2P54296 1465 aa26.68■■□□□ 1.86
HOXA9-203ENST00000465941 PIK3R4Q99570 1358 aa26.67■■□□□ 1.86
HOXA9-203ENST00000465941 NRXN1Q9ULB1 1477 aa26.65■■□□□ 1.86
HOXA9-203ENST00000465941 CERKQ8TCT0 537 aa26.64■■□□□ 1.86
HOXA9-203ENST00000465941 KDM2AQ9Y2K7 1162 aa26.64■■□□□ 1.86
HOXA9-203ENST00000465941 CPS1P31327 1500 aa26.64■■□□□ 1.85
HOXA9-203ENST00000465941 PIK3C2GO75747 1445 aa26.64■■□□□ 1.85
HOXA9-203ENST00000465941 METP08581 1390 aa26.62■■□□□ 1.85
HOXA9-203ENST00000465941 ALKQ9UM73 1620 aa26.62■■□□□ 1.85
HOXA9-203ENST00000465941 CLSPNQ9HAW4 1339 aa26.62■■□□□ 1.85
HOXA9-203ENST00000465941 L3MBTL2Q969R5 705 aa26.6■■□□□ 1.85
HOXA9-203ENST00000465941 C14orf93Q9H972 538 aaKnown RBP26.59■■□□□ 1.85
HOXA9-203ENST00000465941 STRCP1A6NGW2 1772 aa26.58■■□□□ 1.85
HOXA9-203ENST00000465941 AMOTL2Q9Y2J4 779 aa26.58■■□□□ 1.85
HOXA9-203ENST00000465941 NWD1Q149M9 1564 aa26.58■■□□□ 1.85
HOXA9-203ENST00000465941 PTPRUQ92729 1446 aa26.57■■□□□ 1.84
HOXA9-203ENST00000465941 CHD2O14647 1828 aaKnown RBP26.56■■□□□ 1.84
HOXA9-203ENST00000465941 NKTRP30414 1462 aaKnown RBP26.55■■□□□ 1.84
HOXA9-203ENST00000465941 LRRC7Q96NW7 1537 aa26.55■■□□□ 1.84
HOXA9-203ENST00000465941 SETD1AO15047 1707 aaKnown RBP26.54■■□□□ 1.84
HOXA9-203ENST00000465941 CFAP70Q5T0N1 1121 aa26.54■■□□□ 1.84
HOXA9-203ENST00000465941 CCER1Q8TC90 406 aaPredicted RBP26.54■■□□□ 1.84
HOXA9-203ENST00000465941 IQSEC2Q5JU85 1478 aa26.54■■□□□ 1.84
HOXA9-203ENST00000465941 PROSER2Q86WR7 435 aaPredicted RBP26.53■■□□□ 1.84
HOXA9-203ENST00000465941 TONSLQ96HA7 1378 aa26.49■■□□□ 1.83
HOXA9-203ENST00000465941 TMEM132EQ6IEE7 984 aa26.49■■□□□ 1.83
HOXA9-203ENST00000465941 PRAG1Q86YV5 1406 aa26.48■■□□□ 1.83
HOXA9-203ENST00000465941 TMEM94Q12767 1356 aa26.47■■□□□ 1.83
HOXA9-203ENST00000465941 LAMC1P11047 1609 aa26.47■■□□□ 1.83
HOXA9-203ENST00000465941 XRN1Q8IZH2 1706 aaKnown RBP26.47■■□□□ 1.83
HOXA9-203ENST00000465941 NCOA3Q9Y6Q9 1424 aa26.46■■□□□ 1.83
HOXA9-203ENST00000465941 LRPPRCP42704 1394 aaKnown RBP26.45■■□□□ 1.82
HOXA9-203ENST00000465941 ASXL1Q8IXJ9 1541 aa26.44■■□□□ 1.82
HOXA9-203ENST00000465941 RBM33Q96EV2 1170 aaKnown RBP26.44■■□□□ 1.82
HOXA9-203ENST00000465941 ABCC11Q96J66 1382 aa26.44■■□□□ 1.82
HOXA9-203ENST00000465941 TIMELESSQ9UNS1 1208 aa26.43■■□□□ 1.82
HOXA9-203ENST00000465941 YTHDC2Q9H6S0 1430 aaKnown RBP26.42■■□□□ 1.82
HOXA9-203ENST00000465941 PTCH1Q13635 1447 aa26.41■■□□□ 1.82
HOXA9-203ENST00000465941 STK26Q9P289 416 aa26.41■■□□□ 1.82
HOXA9-203ENST00000465941 ADGRB1O14514 1584 aa26.41■■□□□ 1.82
HOXA9-203ENST00000465941 TECPR2O15040 1411 aa26.4■■□□□ 1.82
HOXA9-203ENST00000465941 SIRT1Q96EB6 747 aa26.4■■□□□ 1.82
HOXA9-203ENST00000465941 ROBO2Q9HCK4 1378 aa26.4■■□□□ 1.82
HOXA9-203ENST00000465941 XIRP1Q702N8 1843 aaKnown RBP26.37■■□□□ 1.81
HOXA9-203ENST00000465941 KIAA1210Q9ULL0 1709 aa26.36■■□□□ 1.81
HOXA9-203ENST00000465941 NBPF1Q3BBV0 1214 aa26.36■■□□□ 1.81
HOXA9-203ENST00000465941 NBPF8Q3BBV2 869 aa26.36■■□□□ 1.81
HOXA9-203ENST00000465941 FBXO41Q8TF61 875 aa26.36■■□□□ 1.81
HOXA9-203ENST00000465941 TOM1O60784 492 aa26.35■■□□□ 1.81
HOXA9-203ENST00000465941 C19orf44Q9H6X5 657 aa26.35■■□□□ 1.81
HOXA9-203ENST00000465941 UBAP1LF5GYI3 381 aa26.34■■□□□ 1.81
HOXA9-203ENST00000465941 C14orf37Q86TY3 774 aa26.34■■□□□ 1.81
HOXA9-203ENST00000465941 MSH6P52701 1360 aa26.33■■□□□ 1.81
HOXA9-203ENST00000465941 FAM135BQ49AJ0 1406 aa26.33■■□□□ 1.81
HOXA9-203ENST00000465941 KNDC1Q76NI1 1749 aa26.31■■□□□ 1.8
HOXA9-203ENST00000465941 WAPLQ7Z5K2 1190 aa26.31■■□□□ 1.8
HOXA9-203ENST00000465941 TRAK1Q9UPV9 953 aa26.31■■□□□ 1.8
HOXA9-203ENST00000465941 DLC1Q96QB1 1528 aa26.29■■□□□ 1.8
HOXA9-203ENST00000465941 ADGRL3Q9HAR2 1447 aa26.28■■□□□ 1.8
HOXA9-203ENST00000465941 CADPS2Q86UW7 1296 aa26.27■■□□□ 1.8
HOXA9-203ENST00000465941 PRAM1Q96QH2 718 aa26.27■■□□□ 1.8
HOXA9-203ENST00000465941 PLEKHH1Q9ULM0 1364 aa26.27■■□□□ 1.8
HOXA9-203ENST00000465941 TRPM1Q7Z4N2 1603 aa26.27■■□□□ 1.8
HOXA9-203ENST00000465941 ATF3P18847 181 aa26.26■■□□□ 1.79
HOXA9-203ENST00000465941 DCCP43146 1447 aa26.25■■□□□ 1.79
HOXA9-203ENST00000465941 ROCK2O75116 1388 aaKnown RBP26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms