RNA–Protein interactions for RNA: ENST00000465672.1

RETREG2-209, Transcript of reticulophagy regulator family member 2, humanhuman

TSL 4

Gene RETREG2, Length 550 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2-209ENST00000465672 CHD2O14647 1828 aaKnown RBP24.23■■□□□ 1.47
RETREG2-209ENST00000465672 MYO5BQ9ULV0 1848 aa24.23■■□□□ 1.47
RETREG2-209ENST00000465672 NOS1P29475 1434 aa24.21■■□□□ 1.47
RETREG2-209ENST00000465672 LOC105371045A0A1W2PR82 267 aa24.2■■□□□ 1.46
RETREG2-209ENST00000465672 MEX3CQ5U5Q3 659 aaKnown RBP24.2■■□□□ 1.46
RETREG2-209ENST00000465672 COL16A1Q07092 1604 aaPredicted RBP24.2■■□□□ 1.46
RETREG2-209ENST00000465672 ANKRD30AQ9BXX3 1397 aa24.19■■□□□ 1.46
RETREG2-209ENST00000465672 SLC52A1Q9NWF4 448 aa24.19■■□□□ 1.46
RETREG2-209ENST00000465672 PPP1R15AO75807 674 aaPredicted RBP24.18■■□□□ 1.46
RETREG2-209ENST00000465672 TRIM52Q96A61 297 aa24.18■■□□□ 1.46
RETREG2-209ENST00000465672 C14orf37Q86TY3 774 aa24.17■■□□□ 1.46
RETREG2-209ENST00000465672 LRP6O75581 1613 aa24.16■■□□□ 1.46
RETREG2-209ENST00000465672 UPF1Q92900 1129 aaKnown RBP eCLIP24.15■■□□□ 1.46
RETREG2-209ENST00000465672 GCC2Q8IWJ2 1684 aa24.15■■□□□ 1.46
RETREG2-209ENST00000465672 ZNF772Q68DY9 489 aaPredicted RBP24.14■■□□□ 1.45
RETREG2-209ENST00000465672 PLEKHG1Q9ULL1 1385 aa24.14■■□□□ 1.45
RETREG2-209ENST00000465672 SPATA31A6Q5VVP1 1343 aa24.13■■□□□ 1.45
RETREG2-209ENST00000465672 ZFYVE9O95405 1425 aa24.13■■□□□ 1.45
RETREG2-209ENST00000465672 FGD6Q6ZV73 1430 aa24.12■■□□□ 1.45
RETREG2-209ENST00000465672 RIMS2Q9UQ26 1411 aa24.12■■□□□ 1.45
RETREG2-209ENST00000465672 HDGFP51858 240 aaKnown RBP24.12■■□□□ 1.45
RETREG2-209ENST00000465672 APLP2Q06481 763 aa24.12■■□□□ 1.45
RETREG2-209ENST00000465672 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.1■■□□□ 1.45
RETREG2-209ENST00000465672 CHGAP10645 457 aaKnown RBP24.08■■□□□ 1.45
RETREG2-209ENST00000465672 NUTM2DQ5VT03 806 aaPredicted RBP24.08■■□□□ 1.45
RETREG2-209ENST00000465672 TBX22Q9Y458 520 aa24.08■■□□□ 1.45
RETREG2-209ENST00000465672 TMEM131LA2VDJ0 1609 aa24.08■■□□□ 1.45
RETREG2-209ENST00000465672 SHPRHQ149N8 1683 aa24.08■■□□□ 1.44
RETREG2-209ENST00000465672 ATF3P18847 181 aa24.07■■□□□ 1.44
RETREG2-209ENST00000465672 RPRD2Q5VT52 1461 aaKnown RBP24.07■■□□□ 1.44
RETREG2-209ENST00000465672 NUTM2BA6NNL0 878 aaPredicted RBP24.06■■□□□ 1.44
RETREG2-209ENST00000465672 NUTM2EB1AL46 878 aaPredicted RBP24.06■■□□□ 1.44
RETREG2-209ENST00000465672 CADPS2Q86UW7 1296 aa24.06■■□□□ 1.44
RETREG2-209ENST00000465672 NUTM2AQ8IVF1 878 aaPredicted RBP24.06■■□□□ 1.44
RETREG2-209ENST00000465672 NCOA3Q9Y6Q9 1424 aa24.06■■□□□ 1.44
RETREG2-209ENST00000465672 AHDC1Q5TGY3 1603 aaPredicted RBP24.06■■□□□ 1.44
RETREG2-209ENST00000465672 RXRBP28702 533 aa24.05■■□□□ 1.44
RETREG2-209ENST00000465672 C19orf44Q9H6X5 657 aa24.05■■□□□ 1.44
RETREG2-209ENST00000465672 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.03■■□□□ 1.44
RETREG2-209ENST00000465672 ADAMTS13Q76LX8 1427 aa24.01■■□□□ 1.43
RETREG2-209ENST00000465672 ANKRD50Q9ULJ7 1429 aa24.01■■□□□ 1.43
RETREG2-209ENST00000465672 ADGRL2O95490 1459 aa24■■□□□ 1.43
RETREG2-209ENST00000465672 FAM50AQ14320 339 aaKnown RBP23.99■■□□□ 1.43
RETREG2-209ENST00000465672 BRINP3Q76B58 766 aa23.98■■□□□ 1.43
RETREG2-209ENST00000465672 DIP2AQ14689 1571 aa23.97■■□□□ 1.43
RETREG2-209ENST00000465672 AFF2P51816 1311 aa23.96■■□□□ 1.43
RETREG2-209ENST00000465672 AMOTL2Q9Y2J4 779 aa23.96■■□□□ 1.43
RETREG2-209ENST00000465672 PIK3R4Q99570 1358 aa23.95■■□□□ 1.42
RETREG2-209ENST00000465672 E9PCH4 1651 aa23.94■■□□□ 1.42
RETREG2-209ENST00000465672 TRPM2O94759 1503 aa23.93■■□□□ 1.42
RETREG2-209ENST00000465672 CDK12Q9NYV4 1490 aaPredicted RBP23.93■■□□□ 1.42
RETREG2-209ENST00000465672 PTPRUQ92729 1446 aa23.92■■□□□ 1.42
RETREG2-209ENST00000465672 ASXL1Q8IXJ9 1541 aa23.89■■□□□ 1.42
RETREG2-209ENST00000465672 UNC13BO14795 1591 aa23.89■■□□□ 1.41
RETREG2-209ENST00000465672 C8orf37Q96NL8 207 aa23.88■■□□□ 1.41
RETREG2-209ENST00000465672 QTRT2Q9H974 415 aaKnown RBP23.87■■□□□ 1.41
RETREG2-209ENST00000465672 NHSL1Q5SYE7 1610 aa23.87■■□□□ 1.41
RETREG2-209ENST00000465672 SETD5Q9C0A6 1442 aa23.86■■□□□ 1.41
RETREG2-209ENST00000465672 DCCP43146 1447 aa23.85■■□□□ 1.41
RETREG2-209ENST00000465672 DDX17Q92841 729 aaKnown RBP23.85■■□□□ 1.41
RETREG2-209ENST00000465672 LRRC59Q96AG4 307 aaKnown RBP23.85■■□□□ 1.41
RETREG2-209ENST00000465672 RGS12O14924 1447 aa23.84■■□□□ 1.41
RETREG2-209ENST00000465672 MST1RQ04912 1400 aa23.84■■□□□ 1.41
RETREG2-209ENST00000465672 RBM6P78332 1123 aaKnown RBP23.83■■□□□ 1.41
RETREG2-209ENST00000465672 XRN1Q8IZH2 1706 aaKnown RBP23.83■■□□□ 1.41
RETREG2-209ENST00000465672 IQGAP3Q86VI3 1631 aa23.81■■□□□ 1.4
RETREG2-209ENST00000465672 NRXN3Q9Y4C0 1643 aa23.81■■□□□ 1.4
RETREG2-209ENST00000465672 PNPLA6Q8IY17 1366 aa23.78■■□□□ 1.4
RETREG2-209ENST00000465672 ADAMTS2O95450 1211 aa23.78■■□□□ 1.4
RETREG2-209ENST00000465672 NGLY1Q96IV0 654 aa23.78■■□□□ 1.4
RETREG2-209ENST00000465672 ZNF326Q5BKZ1 582 aaKnown RBP23.77■■□□□ 1.4
RETREG2-209ENST00000465672 SETBP1Q9Y6X0 1596 aa23.76■■□□□ 1.39
RETREG2-209ENST00000465672 NUP155O75694 1391 aa23.76■■□□□ 1.39
RETREG2-209ENST00000465672 METP08581 1390 aa23.76■■□□□ 1.39
RETREG2-209ENST00000465672 NALCNQ8IZF0 1738 aa23.74■■□□□ 1.39
RETREG2-209ENST00000465672 ADGRL3Q9HAR2 1447 aa23.73■■□□□ 1.39
RETREG2-209ENST00000465672 SPHKAPQ2M3C7 1700 aa23.7■■□□□ 1.39
RETREG2-209ENST00000465672 ATAD2Q6PL18 1390 aa23.7■■□□□ 1.38
RETREG2-209ENST00000465672 USP21Q9UK80 565 aa23.69■■□□□ 1.38
RETREG2-209ENST00000465672 ROCK1Q13464 1354 aa23.68■■□□□ 1.38
RETREG2-209ENST00000465672 ITGAEP38570 1179 aa23.67■■□□□ 1.38
RETREG2-209ENST00000465672 C1orf167Q5SNV9 1468 aa23.66■■□□□ 1.38
RETREG2-209ENST00000465672 SRCAPQ6ZRS2 3230 aa23.65■■□□□ 1.38
RETREG2-209ENST00000465672 ORAI2Q96SN7 254 aa23.64■■□□□ 1.37
RETREG2-209ENST00000465672 ZRANB1Q9UGI0 708 aa23.64■■□□□ 1.37
RETREG2-209ENST00000465672 TRPC5Q9UL62 973 aaPredicted RBP23.64■■□□□ 1.37
RETREG2-209ENST00000465672 LAMC1P11047 1609 aa23.62■■□□□ 1.37
RETREG2-209ENST00000465672 SOS2Q07890 1332 aaPredicted RBP23.61■■□□□ 1.37
RETREG2-209ENST00000465672 NEXMIFQ5QGS0 1516 aa23.61■■□□□ 1.37
RETREG2-209ENST00000465672 FOXD1Q16676 465 aa23.61■■□□□ 1.37
RETREG2-209ENST00000465672 FNBP4Q8N3X1 1017 aaPredicted RBP23.59■■□□□ 1.37
RETREG2-209ENST00000465672 KIF1BO60333 1816 aa23.59■■□□□ 1.37
RETREG2-209ENST00000465672 CLTCL1P53675 1640 aa23.59■■□□□ 1.37
RETREG2-209ENST00000465672 PTCH1Q13635 1447 aa23.58■■□□□ 1.36
RETREG2-209ENST00000465672 ATRNO75882 1429 aa23.57■■□□□ 1.36
RETREG2-209ENST00000465672 ROBO2Q9HCK4 1378 aa23.55■■□□□ 1.36
RETREG2-209ENST00000465672 COL22A1Q8NFW1 1626 aaPredicted RBP23.53■■□□□ 1.36
RETREG2-209ENST00000465672 MARF1Q9Y4F3 1742 aaKnown RBP23.52■■□□□ 1.36
RETREG2-209ENST00000465672 CCDC125Q86Z20 511 aa23.51■■□□□ 1.35
RETREG2-209ENST00000465672 EP400Q96L91 3159 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms