RNA–Protein interactions for RNA: ENST00000465385.5

MMP11-206, Transcript of matrix metallopeptidase 11, humanhuman

TSL 2

Gene MMP11, Length 3,823 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-206ENST00000465385 CEP170Q5SW79 1584 aa17.42■□□□□ 0.38
MMP11-206ENST00000465385 KDM5DQ9BY66 1539 aa17.42■□□□□ 0.38
MMP11-206ENST00000465385 RSPH4AQ5TD94 716 aa17.42■□□□□ 0.38
MMP11-206ENST00000465385 SEC24BO95487 1268 aa17.41■□□□□ 0.38
MMP11-206ENST00000465385 POGKQ9P215 609 aa17.41■□□□□ 0.38
MMP11-206ENST00000465385 ZMYM4Q5VZL5 1548 aa17.41■□□□□ 0.38
MMP11-206ENST00000465385 CROCC2H7BZ55 1655 aa17.4■□□□□ 0.38
MMP11-206ENST00000465385 SHANK2Q9UPX8 1470 aa17.4■□□□□ 0.38
MMP11-206ENST00000465385 E9PSI1 815 aa17.4■□□□□ 0.38
MMP11-206ENST00000465385 ABCC10Q5T3U5 1492 aa17.39■□□□□ 0.37
MMP11-206ENST00000465385 CFAP70Q5T0N1 1121 aa17.39■□□□□ 0.37
MMP11-206ENST00000465385 PLA2R1Q13018 1463 aa17.38■□□□□ 0.37
MMP11-206ENST00000465385 CDC42BPAQ5VT25 1732 aa17.38■□□□□ 0.37
MMP11-206ENST00000465385 SYCP2Q9BX26 1530 aa17.38■□□□□ 0.37
MMP11-206ENST00000465385 MAGI2Q86UL8 1455 aa17.38■□□□□ 0.37
MMP11-206ENST00000465385 TNNQ9UQP3 1299 aa17.37■□□□□ 0.37
MMP11-206ENST00000465385 MORC1Q86VD1 984 aa17.37■□□□□ 0.37
MMP11-206ENST00000465385 NUP160Q12769 1436 aa17.36■□□□□ 0.37
MMP11-206ENST00000465385 GPRASP1Q5JY77 1395 aa17.36■□□□□ 0.37
MMP11-206ENST00000465385 AFAP1Q8N556 730 aa17.36■□□□□ 0.37
MMP11-206ENST00000465385 CGNL1Q0VF96 1302 aa17.35■□□□□ 0.37
MMP11-206ENST00000465385 TRPM1Q7Z4N2 1603 aa17.35■□□□□ 0.37
MMP11-206ENST00000465385 E9PCH4 1651 aa17.33■□□□□ 0.37
MMP11-206ENST00000465385 FTSJ3Q8IY81 847 aaKnown RBP17.33■□□□□ 0.37
MMP11-206ENST00000465385 KIF3BO15066 747 aa17.33■□□□□ 0.36
MMP11-206ENST00000465385 TRAK1Q9UPV9 953 aa17.33■□□□□ 0.36
MMP11-206ENST00000465385 NPM1P06748 294 aaKnown RBP eCLIP17.33■□□□□ 0.36
MMP11-206ENST00000465385 NKTRP30414 1462 aaKnown RBP17.33■□□□□ 0.36
MMP11-206ENST00000465385 MFAP1P55081 439 aaKnown RBP17.32■□□□□ 0.36
MMP11-206ENST00000465385 SPAG9O60271 1321 aaKnown RBP17.32■□□□□ 0.36
MMP11-206ENST00000465385 EFCAB2Q5VUJ9 269 aa17.32■□□□□ 0.36
MMP11-206ENST00000465385 SAFB2Q14151 953 aaKnown RBP eCLIP17.32■□□□□ 0.36
MMP11-206ENST00000465385 ZNF521Q96K83 1311 aa17.31■□□□□ 0.36
MMP11-206ENST00000465385 MAPK8IP3Q9UPT6 1336 aa17.31■□□□□ 0.36
MMP11-206ENST00000465385 WWC1Q8IX03 1113 aa17.31■□□□□ 0.36
MMP11-206ENST00000465385 NUTM2DQ5VT03 806 aaPredicted RBP17.3■□□□□ 0.36
MMP11-206ENST00000465385 ADCY10Q96PN6 1610 aa17.29■□□□□ 0.36
MMP11-206ENST00000465385 TCP11L2Q8N4U5 519 aa17.29■□□□□ 0.36
MMP11-206ENST00000465385 PDZRN3Q9UPQ7 1066 aa17.29■□□□□ 0.36
MMP11-206ENST00000465385 SAMD9LQ8IVG5 1584 aa17.29■□□□□ 0.36
MMP11-206ENST00000465385 U2AF1L5P0DN76 240 aaPredicted RBP17.29■□□□□ 0.36
MMP11-206ENST00000465385 U2AF1Q01081 240 aaKnown RBP eCLIP17.29■□□□□ 0.36
MMP11-206ENST00000465385 WDR7Q9Y4E6 1490 aa17.29■□□□□ 0.36
MMP11-206ENST00000465385 EIF3AQ14152 1382 aaKnown RBP17.28■□□□□ 0.36
MMP11-206ENST00000465385 U2SURPO15042 1029 aaKnown RBP17.28■□□□□ 0.36
MMP11-206ENST00000465385 PRDM15P57071 1507 aaPredicted RBP17.28■□□□□ 0.36
MMP11-206ENST00000465385 CARD14Q9BXL6 1004 aa17.27■□□□□ 0.36
MMP11-206ENST00000465385 RLBP1P12271 317 aa17.27■□□□□ 0.36
MMP11-206ENST00000465385 SLC12A5Q9H2X9 1139 aa17.27■□□□□ 0.36
MMP11-206ENST00000465385 PCDHB15Q9Y5E8 787 aa17.27■□□□□ 0.35
MMP11-206ENST00000465385 PDE3AQ14432 1141 aa17.26■□□□□ 0.35
MMP11-206ENST00000465385 PMFBP1Q8TBY8 1022 aa17.26■□□□□ 0.35
MMP11-206ENST00000465385 ABCA8O94911 1581 aa17.26■□□□□ 0.35
MMP11-206ENST00000465385 ASXL1Q8IXJ9 1541 aa17.25■□□□□ 0.35
MMP11-206ENST00000465385 TMEM132EQ6IEE7 984 aa17.24■□□□□ 0.35
MMP11-206ENST00000465385 RWDD1Q9H446 243 aaPredicted RBP17.24■□□□□ 0.35
MMP11-206ENST00000465385 ADGRF5Q8IZF2 1346 aa17.24■□□□□ 0.35
MMP11-206ENST00000465385 ITPRIPQ8IWB1 547 aa17.24■□□□□ 0.35
MMP11-206ENST00000465385 TSR2Q969E8 191 aaKnown RBP17.24■□□□□ 0.35
MMP11-206ENST00000465385 MTHFSP49914 203 aa17.23■□□□□ 0.35
MMP11-206ENST00000465385 CFAP53Q96M91 514 aa17.23■□□□□ 0.35
MMP11-206ENST00000465385 RARSP54136 660 aaKnown RBP17.23■□□□□ 0.35
MMP11-206ENST00000465385 USP19O94966 1318 aa17.23■□□□□ 0.35
MMP11-206ENST00000465385 SCAF11Q99590 1463 aaKnown RBP17.23■□□□□ 0.35
MMP11-206ENST00000465385 NAP1L5Q96NT1 182 aaPredicted RBP17.23■□□□□ 0.35
MMP11-206ENST00000465385 TBC1D2Q9BYX2 928 aa17.22■□□□□ 0.35
MMP11-206ENST00000465385 SMC4Q9NTJ3 1288 aa17.22■□□□□ 0.35
MMP11-206ENST00000465385 HSP90AA1P07900 732 aaKnown RBP17.22■□□□□ 0.35
MMP11-206ENST00000465385 ARHGEF5Q12774 1597 aa17.22■□□□□ 0.35
MMP11-206ENST00000465385 RUNDC1Q96C34 613 aa17.21■□□□□ 0.35
MMP11-206ENST00000465385 INSRP06213 1382 aa17.21■□□□□ 0.35
MMP11-206ENST00000465385 FOXD4L1Q9NU39 408 aa17.21■□□□□ 0.35
MMP11-206ENST00000465385 EIF2AK4Q9P2K8 1649 aaKnown RBP17.21■□□□□ 0.35
MMP11-206ENST00000465385 L1TD1Q5T7N2 865 aaKnown RBP17.21■□□□□ 0.35
MMP11-206ENST00000465385 TRMT2AQ8IZ69 625 aaKnown RBP17.2■□□□□ 0.34
MMP11-206ENST00000465385 PIK3C2GO75747 1445 aa17.2■□□□□ 0.34
MMP11-206ENST00000465385 KANK1Q14678 1352 aa17.2■□□□□ 0.34
MMP11-206ENST00000465385 GOLGA6L3A6NEY3 463 aa17.2■□□□□ 0.34
MMP11-206ENST00000465385 OSCARQ8IYS5 282 aa17.19■□□□□ 0.34
MMP11-206ENST00000465385 FAM43AQ8N2R8 423 aa17.18■□□□□ 0.34
MMP11-206ENST00000465385 NSD3Q9BZ95 1437 aa17.18■□□□□ 0.34
MMP11-206ENST00000465385 TRAPPC8Q9Y2L5 1435 aa17.17■□□□□ 0.34
MMP11-206ENST00000465385 GGT6Q6P531 493 aa17.17■□□□□ 0.34
MMP11-206ENST00000465385 C22orf23Q9BZE7 217 aa17.17■□□□□ 0.34
MMP11-206ENST00000465385 HSCBQ8IWL3 235 aa17.16■□□□□ 0.34
MMP11-206ENST00000465385 PANK2Q9BZ23 570 aa17.16■□□□□ 0.34
MMP11-206ENST00000465385 MYH16Q9H6N6 1097 aa17.16■□□□□ 0.34
MMP11-206ENST00000465385 ZKSCAN2Q63HK3 967 aa17.16■□□□□ 0.34
MMP11-206ENST00000465385 TTC37Q6PGP7 1564 aa17.16■□□□□ 0.34
MMP11-206ENST00000465385 STK26Q9P289 416 aa17.16■□□□□ 0.34
MMP11-206ENST00000465385 CDC42BPBQ9Y5S2 1711 aa17.16■□□□□ 0.34
MMP11-206ENST00000465385 DZIP1LQ8IYY4 767 aaKnown RBP17.15■□□□□ 0.34
MMP11-206ENST00000465385 TBC1D32Q96NH3 1257 aa17.15■□□□□ 0.34
MMP11-206ENST00000465385 MYO5CQ9NQX4 1742 aa17.15■□□□□ 0.34
MMP11-206ENST00000465385 RSPH6AQ9H0K4 717 aa17.14■□□□□ 0.33
MMP11-206ENST00000465385 RRAGDQ9NQL2 400 aaPredicted RBP17.14■□□□□ 0.33
MMP11-206ENST00000465385 DUOX2Q9NRD8 1548 aa17.14■□□□□ 0.33
MMP11-206ENST00000465385 CHD1O14646 1710 aa17.13■□□□□ 0.33
MMP11-206ENST00000465385 EXOSC9Q06265 439 aaKnown RBP17.13■□□□□ 0.33
MMP11-206ENST00000465385 LNPKQ9C0E8 428 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms