RNA–Protein interactions for RNA: ENST00000465320.1

CYTH3-204, Transcript of cytohesin 3, humanhuman

TSL 4

Gene CYTH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-204ENST00000465320 ADGRB3O60242 1522 aa22.33■■□□□ 1.17
CYTH3-204ENST00000465320 MSH6P52701 1360 aa22.32■■□□□ 1.16
CYTH3-204ENST00000465320 JCADQ9P266 1359 aa22.31■■□□□ 1.16
CYTH3-204ENST00000465320 COL16A1Q07092 1604 aaPredicted RBP22.3■■□□□ 1.16
CYTH3-204ENST00000465320 ZFYVE9O95405 1425 aa22.3■■□□□ 1.16
CYTH3-204ENST00000465320 SLC52A1Q9NWF4 448 aa22.29■■□□□ 1.16
CYTH3-204ENST00000465320 LRP6O75581 1613 aa22.28■■□□□ 1.16
CYTH3-204ENST00000465320 BCANQ96GW7 911 aa22.27■■□□□ 1.16
CYTH3-204ENST00000465320 ANKRD30AQ9BXX3 1397 aa22.26■■□□□ 1.15
CYTH3-204ENST00000465320 PLEKHG1Q9ULL1 1385 aa22.25■■□□□ 1.15
CYTH3-204ENST00000465320 FGD6Q6ZV73 1430 aa22.25■■□□□ 1.15
CYTH3-204ENST00000465320 UPF1Q92900 1129 aaKnown RBP eCLIP22.24■■□□□ 1.157e-7■■■■■ 42.5
CYTH3-204ENST00000465320 RIMS2Q9UQ26 1411 aa22.23■■□□□ 1.15
CYTH3-204ENST00000465320 TMEM131LA2VDJ0 1609 aa22.22■■□□□ 1.15
CYTH3-204ENST00000465320 GCC2Q8IWJ2 1684 aa22.22■■□□□ 1.15
CYTH3-204ENST00000465320 TBX22Q9Y458 520 aa22.21■■□□□ 1.15
CYTH3-204ENST00000465320 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.2■■□□□ 1.14
CYTH3-204ENST00000465320 SPATA31A6Q5VVP1 1343 aa22.19■■□□□ 1.14
CYTH3-204ENST00000465320 ADGRL2O95490 1459 aa22.18■■□□□ 1.14
CYTH3-204ENST00000465320 RPRD2Q5VT52 1461 aaKnown RBP22.18■■□□□ 1.14
CYTH3-204ENST00000465320 ADAMTS13Q76LX8 1427 aa22.18■■□□□ 1.14
CYTH3-204ENST00000465320 NCOA3Q9Y6Q9 1424 aa22.18■■□□□ 1.14
CYTH3-204ENST00000465320 TRIM52Q96A61 297 aa22.18■■□□□ 1.14
CYTH3-204ENST00000465320 AHDC1Q5TGY3 1603 aaPredicted RBP22.17■■□□□ 1.14
CYTH3-204ENST00000465320 NUTM2DQ5VT03 806 aaPredicted RBP22.16■■□□□ 1.14
CYTH3-204ENST00000465320 SHPRHQ149N8 1683 aa22.16■■□□□ 1.14
CYTH3-204ENST00000465320 PPP1R15AO75807 674 aaPredicted RBP22.15■■□□□ 1.14
CYTH3-204ENST00000465320 ZNF772Q68DY9 489 aaPredicted RBP22.15■■□□□ 1.14
CYTH3-204ENST00000465320 C19orf44Q9H6X5 657 aa22.14■■□□□ 1.13
CYTH3-204ENST00000465320 MEX3CQ5U5Q3 659 aaKnown RBP22.13■■□□□ 1.13
CYTH3-204ENST00000465320 ANKRD50Q9ULJ7 1429 aa22.13■■□□□ 1.13
CYTH3-204ENST00000465320 DIP2AQ14689 1571 aa22.12■■□□□ 1.13
CYTH3-204ENST00000465320 SRCAPQ6ZRS2 3230 aa22.12■■□□□ 1.13
CYTH3-204ENST00000465320 HDGFP51858 240 aaKnown RBP22.12■■□□□ 1.13
CYTH3-204ENST00000465320 C14orf37Q86TY3 774 aa22.12■■□□□ 1.13
CYTH3-204ENST00000465320 CADPS2Q86UW7 1296 aa22.12■■□□□ 1.13
CYTH3-204ENST00000465320 BRINP3Q76B58 766 aa22.11■■□□□ 1.13
CYTH3-204ENST00000465320 PTPRUQ92729 1446 aa22.11■■□□□ 1.13
CYTH3-204ENST00000465320 CHGAP10645 457 aaKnown RBP22.09■■□□□ 1.13
CYTH3-204ENST00000465320 ATF3P18847 181 aa22.09■■□□□ 1.13
CYTH3-204ENST00000465320 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.09■■□□□ 1.13
CYTH3-204ENST00000465320 E9PCH4 1651 aa22.08■■□□□ 1.13
CYTH3-204ENST00000465320 RXRBP28702 533 aa22.08■■□□□ 1.13
CYTH3-204ENST00000465320 APLP2Q06481 763 aa22.08■■□□□ 1.13
CYTH3-204ENST00000465320 NUTM2BA6NNL0 878 aaPredicted RBP22.07■■□□□ 1.12
CYTH3-204ENST00000465320 NUTM2EB1AL46 878 aaPredicted RBP22.07■■□□□ 1.12
CYTH3-204ENST00000465320 NUTM2AQ8IVF1 878 aaPredicted RBP22.07■■□□□ 1.12
CYTH3-204ENST00000465320 AMOTL2Q9Y2J4 779 aa22.07■■□□□ 1.12
CYTH3-204ENST00000465320 PIK3R4Q99570 1358 aa22.07■■□□□ 1.12
CYTH3-204ENST00000465320 FAM50AQ14320 339 aaKnown RBP22.04■■□□□ 1.12
CYTH3-204ENST00000465320 UNC13BO14795 1591 aa22.04■■□□□ 1.12
CYTH3-204ENST00000465320 CDK12Q9NYV4 1490 aaPredicted RBP22.03■■□□□ 1.12
CYTH3-204ENST00000465320 AFF2P51816 1311 aa22.03■■□□□ 1.12
CYTH3-204ENST00000465320 TRPM2O94759 1503 aa22.01■■□□□ 1.11
CYTH3-204ENST00000465320 SETD5Q9C0A6 1442 aa22■■□□□ 1.11
CYTH3-204ENST00000465320 ASXL1Q8IXJ9 1541 aa22■■□□□ 1.11
CYTH3-204ENST00000465320 NHSL1Q5SYE7 1610 aa21.99■■□□□ 1.11
CYTH3-204ENST00000465320 NRXN3Q9Y4C0 1643 aa21.99■■□□□ 1.11
CYTH3-204ENST00000465320 DDX17Q92841 729 aaKnown RBP21.99■■□□□ 1.11
CYTH3-204ENST00000465320 MST1RQ04912 1400 aa21.98■■□□□ 1.11
CYTH3-204ENST00000465320 XRN1Q8IZH2 1706 aaKnown RBP21.98■■□□□ 1.11
CYTH3-204ENST00000465320 DCCP43146 1447 aa21.97■■□□□ 1.11
CYTH3-204ENST00000465320 IQGAP3Q86VI3 1631 aa21.95■■□□□ 1.1
CYTH3-204ENST00000465320 QTRT2Q9H974 415 aaKnown RBP21.95■■□□□ 1.1
CYTH3-204ENST00000465320 RGS12O14924 1447 aa21.95■■□□□ 1.1
CYTH3-204ENST00000465320 METP08581 1390 aa21.94■■□□□ 1.1
CYTH3-204ENST00000465320 LRRC59Q96AG4 307 aaKnown RBP21.93■■□□□ 1.1
CYTH3-204ENST00000465320 PNPLA6Q8IY17 1366 aa21.92■■□□□ 1.1
CYTH3-204ENST00000465320 C8orf37Q96NL8 207 aa21.92■■□□□ 1.1
CYTH3-204ENST00000465320 SETBP1Q9Y6X0 1596 aa21.91■■□□□ 1.1
CYTH3-204ENST00000465320 RBM6P78332 1123 aaKnown RBP21.9■■□□□ 1.1
CYTH3-204ENST00000465320 NUP155O75694 1391 aa21.88■■□□□ 1.09
CYTH3-204ENST00000465320 NALCNQ8IZF0 1738 aa21.87■■□□□ 1.09
CYTH3-204ENST00000465320 EP400Q96L91 3159 aa21.87■■□□□ 1.09
CYTH3-204ENST00000465320 ROCK1Q13464 1354 aa21.87■■□□□ 1.09
CYTH3-204ENST00000465320 ADGRL3Q9HAR2 1447 aa21.86■■□□□ 1.09
CYTH3-204ENST00000465320 ADAMTS2O95450 1211 aa21.84■■□□□ 1.09
CYTH3-204ENST00000465320 SPHKAPQ2M3C7 1700 aa21.83■■□□□ 1.08
CYTH3-204ENST00000465320 NGLY1Q96IV0 654 aa21.82■■□□□ 1.08
CYTH3-204ENST00000465320 C1orf167Q5SNV9 1468 aa21.82■■□□□ 1.08
CYTH3-204ENST00000465320 LAMC1P11047 1609 aa21.81■■□□□ 1.08
CYTH3-204ENST00000465320 ZNF326Q5BKZ1 582 aaKnown RBP21.81■■□□□ 1.08
CYTH3-204ENST00000465320 ORAI2Q96SN7 254 aa21.79■■□□□ 1.08
CYTH3-204ENST00000465320 NEXMIFQ5QGS0 1516 aa21.79■■□□□ 1.08
CYTH3-204ENST00000465320 SOS2Q07890 1332 aaPredicted RBP21.79■■□□□ 1.08
CYTH3-204ENST00000465320 FNBP4Q8N3X1 1017 aaPredicted RBP21.76■■□□□ 1.07
CYTH3-204ENST00000465320 USP21Q9UK80 565 aa21.76■■□□□ 1.07
CYTH3-204ENST00000465320 CLTCL1P53675 1640 aa21.76■■□□□ 1.07
CYTH3-204ENST00000465320 ATAD2Q6PL18 1390 aa21.74■■□□□ 1.07
CYTH3-204ENST00000465320 ITGAEP38570 1179 aa21.74■■□□□ 1.07
CYTH3-204ENST00000465320 ROBO2Q9HCK4 1378 aa21.74■■□□□ 1.07
CYTH3-204ENST00000465320 ATRNO75882 1429 aa21.72■■□□□ 1.07
CYTH3-204ENST00000465320 TRPC5Q9UL62 973 aaPredicted RBP21.72■■□□□ 1.07
CYTH3-204ENST00000465320 PTCH1Q13635 1447 aa21.7■■□□□ 1.06
CYTH3-204ENST00000465320 COL22A1Q8NFW1 1626 aaPredicted RBP21.69■■□□□ 1.06
CYTH3-204ENST00000465320 KIF1BO60333 1816 aa21.69■■□□□ 1.06
CYTH3-204ENST00000465320 BCL9LQ86UU0 1499 aa21.68■■□□□ 1.06
CYTH3-204ENST00000465320 ZRANB1Q9UGI0 708 aa21.66■■□□□ 1.06
CYTH3-204ENST00000465320 MYOM2P54296 1465 aa21.65■■□□□ 1.06
CYTH3-204ENST00000465320 MARF1Q9Y4F3 1742 aaKnown RBP21.64■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms