RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	ANKRD13D	Q6ZTN6	518 aa		10.31	□□□□□ -0.76
CACNA1C-223	ENST00000465278	SLC4A5	Q9BY07	1137 aa		10.31	□□□□□ -0.76
CACNA1C-223	ENST00000465278	FAM217B	Q9NTX9	383 aa	Predicted RBP	10.3	□□□□□ -0.76
CACNA1C-223	ENST00000465278	DAXX	Q9UER7	740 aa	Predicted RBP	10.3	□□□□□ -0.76
CACNA1C-223	ENST00000465278	DNAJB2	P25686	324 aa		10.29	□□□□□ -0.76
CACNA1C-223	ENST00000465278	LSM11	P83369	360 aa	Known RBP eCLIP	10.28	□□□□□ -0.76
CACNA1C-223	ENST00000465278	DDRGK1	Q96HY6	314 aa		10.28	□□□□□ -0.76
CACNA1C-223	ENST00000465278	GTF3C3	Q9Y5Q9	886 aa		10.28	□□□□□ -0.76
CACNA1C-223	ENST00000465278	DDX11L8	A8MPP1	907 aa		10.27	□□□□□ -0.77
CACNA1C-223	ENST00000465278	BEGAIN	Q9BUH8	593 aa		10.27	□□□□□ -0.77
CACNA1C-223	ENST00000465278	TMEM134	Q9H6X4	195 aa		10.26	□□□□□ -0.77
CACNA1C-223	ENST00000465278	BHMG1	C9JSJ3	638 aa	Predicted RBP	10.25	□□□□□ -0.77
CACNA1C-223	ENST00000465278	ADGRD1	Q6QNK2	874 aa		10.25	□□□□□ -0.77
CACNA1C-223	ENST00000465278	TK2	O00142	265 aa		10.24	□□□□□ -0.77
CACNA1C-223	ENST00000465278	HDGF	P51858	240 aa	Known RBP	10.24	□□□□□ -0.77
CACNA1C-223	ENST00000465278	SWT1	Q5T5J6	900 aa	Known RBP	10.24	□□□□□ -0.77
CACNA1C-223	ENST00000465278	RIMBP3C	A6NJZ7	1639 aa		10.24	□□□□□ -0.77
CACNA1C-223	ENST00000465278	RIMBP3B	A6NNM3	1639 aa		10.24	□□□□□ -0.77
CACNA1C-223	ENST00000465278	RIMBP3	Q9UFD9	1639 aa		10.24	□□□□□ -0.77
CACNA1C-223	ENST00000465278	FAM98C	Q17RN3	349 aa	Known RBP	10.23	□□□□□ -0.77
CACNA1C-223	ENST00000465278	MRPL50	Q8N5N7	158 aa	Known RBP	10.22	□□□□□ -0.77
CACNA1C-223	ENST00000465278	STAC3	Q96MF2	364 aa		10.22	□□□□□ -0.77
CACNA1C-223	ENST00000465278	NBPF3	Q9H094	633 aa		10.22	□□□□□ -0.77
CACNA1C-223	ENST00000465278	SAMD7	Q7Z3H4	446 aa		10.21	□□□□□ -0.77
CACNA1C-223	ENST00000465278	RDH13	Q8NBN7	331 aa		10.21	□□□□□ -0.77
CACNA1C-223	ENST00000465278	THOC2	Q8NI27	1593 aa	Known RBP	10.21	□□□□□ -0.78
CACNA1C-223	ENST00000465278	ZFR	Q96KR1	1074 aa	Known RBP	10.2	□□□□□ -0.78
CACNA1C-223	ENST00000465278	ATP1B4	Q9UN42	357 aa	Predicted RBP	10.2	□□□□□ -0.78
CACNA1C-223	ENST00000465278	HR	O43593	1189 aa		10.19	□□□□□ -0.78
CACNA1C-223	ENST00000465278	CD46	P15529	392 aa		10.19	□□□□□ -0.78
CACNA1C-223	ENST00000465278	LAPTM4B	Q86VI4	370 aa		10.19	□□□□□ -0.78
CACNA1C-223	ENST00000465278	SULF1	Q8IWU6	871 aa		10.19	□□□□□ -0.78
CACNA1C-223	ENST00000465278	POLR3E	Q9NVU0	708 aa		10.19	□□□□□ -0.78
CACNA1C-223	ENST00000465278	RNF40	O75150	1001 aa		10.18	□□□□□ -0.78
CACNA1C-223	ENST00000465278	SLC10A3	P09131	477 aa		10.18	□□□□□ -0.78
CACNA1C-223	ENST00000465278	POTEG	Q6S5H5	508 aa		10.18	□□□□□ -0.78
CACNA1C-223	ENST00000465278	KRTAP3-3	Q9BYR6	98 aa		10.18	□□□□□ -0.78
CACNA1C-223	ENST00000465278	KRTAP3-2	Q9BYR7	98 aa		10.18	□□□□□ -0.78
CACNA1C-223	ENST00000465278	TBC1D2	Q9BYX2	928 aa		10.17	□□□□□ -0.78
CACNA1C-223	ENST00000465278	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	10.17	□□□□□ -0.78
CACNA1C-223	ENST00000465278	POTEM	A6NI47	508 aa		10.16	□□□□□ -0.78
CACNA1C-223	ENST00000465278	GOLGA8CP	A6NN73	597 aa		10.16	□□□□□ -0.78
CACNA1C-223	ENST00000465278	SPIRE2	Q8WWL2	714 aa		10.16	□□□□□ -0.78
CACNA1C-223	ENST00000465278	RSPH6A	Q9H0K4	717 aa		10.16	□□□□□ -0.78
CACNA1C-223	ENST00000465278	RSPH4A	Q5TD94	716 aa		10.15	□□□□□ -0.78
CACNA1C-223	ENST00000465278	NUTM1	Q86Y26	1132 aa		10.15	□□□□□ -0.78
CACNA1C-223	ENST00000465278	CDAN1	Q8IWY9	1227 aa		10.15	□□□□□ -0.78
CACNA1C-223	ENST00000465278	PROCA1	Q8NCQ7	364 aa	Predicted RBP	10.15	□□□□□ -0.78
CACNA1C-223	ENST00000465278	GCGR	P47871	477 aa		10.13	□□□□□ -0.79
CACNA1C-223	ENST00000465278	SKIV2L	Q15477	1246 aa	Known RBP	10.13	□□□□□ -0.79
CACNA1C-223	ENST00000465278	MYSM1	Q5VVJ2	828 aa		10.13	□□□□□ -0.79
CACNA1C-223	ENST00000465278	PCMTD1	Q96MG8	357 aa	Predicted RBP	10.13	□□□□□ -0.79
CACNA1C-223	ENST00000465278	SLC4A3	P48751	1232 aa		10.12	□□□□□ -0.79
CACNA1C-223	ENST00000465278	SH3D19	Q5HYK7	790 aa		10.12	□□□□□ -0.79
CACNA1C-223	ENST00000465278	SLF2	Q8IX21	1173 aa		10.12	□□□□□ -0.79
CACNA1C-223	ENST00000465278	LRCH3	Q96II8	777 aa		10.12	□□□□□ -0.79
CACNA1C-223	ENST00000465278	NDUFV2	P19404	249 aa		10.11	□□□□□ -0.79
CACNA1C-223	ENST00000465278	GOPC	Q9HD26	462 aa		10.11	□□□□□ -0.79
CACNA1C-223	ENST00000465278	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	10.11	□□□□□ -0.79
CACNA1C-223	ENST00000465278	MOXD2P	A6NHM9	499 aa		10.1	□□□□□ -0.79
CACNA1C-223	ENST00000465278	KDM4A	O75164	1064 aa		10.1	□□□□□ -0.79
CACNA1C-223	ENST00000465278	BCAM	P50895	628 aa		10.1	□□□□□ -0.79
CACNA1C-223	ENST00000465278	RIC3	Q7Z5B4	369 aa		10.1	□□□□□ -0.79
CACNA1C-223	ENST00000465278	WNT2B	Q93097	391 aa		10.1	□□□□□ -0.79
CACNA1C-223	ENST00000465278	DIXDC1	Q155Q3	683 aa		10.09	□□□□□ -0.79
CACNA1C-223	ENST00000465278	ANKK1	Q8NFD2	765 aa		10.09	□□□□□ -0.79
CACNA1C-223	ENST00000465278	CSPP1	Q1MSJ5	1256 aa		10.08	□□□□□ -0.8
CACNA1C-223	ENST00000465278	LIMD1	Q9UGP4	676 aa		10.08	□□□□□ -0.8
CACNA1C-223	ENST00000465278	LMTK3	Q96Q04	1460 aa		10.08	□□□□□ -0.8
CACNA1C-223	ENST00000465278	CFH	P08603	1231 aa		10.07	□□□□□ -0.8
CACNA1C-223	ENST00000465278	PPP4C	P60510	307 aa		10.07	□□□□□ -0.8
CACNA1C-223	ENST00000465278	HLA-C	Q95604	372 aa		10.07	□□□□□ -0.8
CACNA1C-223	ENST00000465278	SOWAHB	A6NEL2	793 aa		10.06	□□□□□ -0.8
CACNA1C-223	ENST00000465278	CLK2	P49760	499 aa	Known RBP	10.06	□□□□□ -0.8
CACNA1C-223	ENST00000465278	HPS5	Q9UPZ3	1129 aa		10.06	□□□□□ -0.8
CACNA1C-223	ENST00000465278	PCDHB15	Q9Y5E8	787 aa		10.06	□□□□□ -0.8
CACNA1C-223	ENST00000465278	SOCS7	O14512	581 aa		10.05	□□□□□ -0.8
CACNA1C-223	ENST00000465278	SPTLC1	O15269	473 aa		10.04	□□□□□ -0.8
CACNA1C-223	ENST00000465278	GUCA2A	Q02747	115 aa		10.04	□□□□□ -0.8
CACNA1C-223	ENST00000465278	FUT2	Q10981	343 aa		10.04	□□□□□ -0.8
CACNA1C-223	ENST00000465278	KCTD12	Q96CX2	325 aa	Known RBP	10.04	□□□□□ -0.8
CACNA1C-223	ENST00000465278	FBXO31	Q5XUX0	539 aa	Predicted RBP	10.03	□□□□□ -0.8
CACNA1C-223	ENST00000465278	RSBN1L	Q6PCB5	846 aa	Predicted RBP	10.03	□□□□□ -0.8
CACNA1C-223	ENST00000465278	HOXA2	O43364	376 aa		10.02	□□□□□ -0.81
CACNA1C-223	ENST00000465278	PUS10	Q3MIT2	529 aa	Known RBP	10.02	□□□□□ -0.81
CACNA1C-223	ENST00000465278	TSR3	Q9UJK0	312 aa	Known RBP	10.02	□□□□□ -0.81
CACNA1C-223	ENST00000465278	FDX1	P10109	184 aa		10.01	□□□□□ -0.81
CACNA1C-223	ENST00000465278	USP46	P62068	366 aa		10.01	□□□□□ -0.81
CACNA1C-223	ENST00000465278	KMT5B	Q4FZB7	885 aa		10.01	□□□□□ -0.81
CACNA1C-223	ENST00000465278	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	10.01	□□□□□ -0.81
CACNA1C-223	ENST00000465278	WBP1L	Q9NX94	342 aa		10.01	□□□□□ -0.81
CACNA1C-223	ENST00000465278	TIMELESS	Q9UNS1	1208 aa		10.01	□□□□□ -0.81
CACNA1C-223	ENST00000465278	ATP6V1A	P38606	617 aa		10	□□□□□ -0.81
CACNA1C-223	ENST00000465278	PCDHGC3	Q9UN70	934 aa		10	□□□□□ -0.81
CACNA1C-223	ENST00000465278	ARHGEF11	O15085	1522 aa		10	□□□□□ -0.81
CACNA1C-223	ENST00000465278	NUTM2B	A6NNL0	878 aa	Predicted RBP	9.99	□□□□□ -0.81
CACNA1C-223	ENST00000465278	NUTM2E	B1AL46	878 aa	Predicted RBP	9.99	□□□□□ -0.81
CACNA1C-223	ENST00000465278	APLP1	P51693	650 aa		9.99	□□□□□ -0.81
CACNA1C-223	ENST00000465278	PTPN5	P54829	565 aa		9.99	□□□□□ -0.81
CACNA1C-223	ENST00000465278	QPCT	Q16769	361 aa		9.99	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms