RNA–Protein interactions for RNA: ENST00000465245.1

TRA2B-208, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-208ENST00000465245 GCC2Q8IWJ2 1684 aa18.92■□□□□ 0.62
TRA2B-208ENST00000465245 BCANQ96GW7 911 aa18.91■□□□□ 0.62
TRA2B-208ENST00000465245 FGD6Q6ZV73 1430 aa18.91■□□□□ 0.62
TRA2B-208ENST00000465245 CHIC2Q9UKJ5 165 aa18.9■□□□□ 0.62
TRA2B-208ENST00000465245 LOC105371045A0A1W2PR82 267 aa18.89■□□□□ 0.61
TRA2B-208ENST00000465245 JCADQ9P266 1359 aa18.89■□□□□ 0.61
TRA2B-208ENST00000465245 COL16A1Q07092 1604 aaPredicted RBP18.89■□□□□ 0.61
TRA2B-208ENST00000465245 SLC52A1Q9NWF4 448 aa18.87■□□□□ 0.61
TRA2B-208ENST00000465245 SLAIN2Q9P270 581 aa18.87■□□□□ 0.61
TRA2B-208ENST00000465245 RPRD2Q5VT52 1461 aaKnown RBP18.85■□□□□ 0.61
TRA2B-208ENST00000465245 ZFYVE9O95405 1425 aa18.85■□□□□ 0.61
TRA2B-208ENST00000465245 PLEKHG1Q9ULL1 1385 aa18.85■□□□□ 0.61
TRA2B-208ENST00000465245 APLP2Q06481 763 aa18.85■□□□□ 0.61
TRA2B-208ENST00000465245 TMEM131LA2VDJ0 1609 aa18.84■□□□□ 0.61
TRA2B-208ENST00000465245 ADGRL2O95490 1459 aa18.84■□□□□ 0.61
TRA2B-208ENST00000465245 PPP1R15AO75807 674 aaPredicted RBP18.83■□□□□ 0.6
TRA2B-208ENST00000465245 RIMS2Q9UQ26 1411 aa18.83■□□□□ 0.6
TRA2B-208ENST00000465245 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.81■□□□□ 0.6
TRA2B-208ENST00000465245 SHPRHQ149N8 1683 aa18.81■□□□□ 0.6
TRA2B-208ENST00000465245 LRP6O75581 1613 aa18.81■□□□□ 0.6
TRA2B-208ENST00000465245 HDGFP51858 240 aaKnown RBP18.79■□□□□ 0.6
TRA2B-208ENST00000465245 NCOA3Q9Y6Q9 1424 aa18.79■□□□□ 0.6
TRA2B-208ENST00000465245 AHDC1Q5TGY3 1603 aaPredicted RBP18.78■□□□□ 0.6
TRA2B-208ENST00000465245 DIP2AQ14689 1571 aa18.78■□□□□ 0.6
TRA2B-208ENST00000465245 ANKRD50Q9ULJ7 1429 aa18.78■□□□□ 0.6
TRA2B-208ENST00000465245 MEX3CQ5U5Q3 659 aaKnown RBP18.78■□□□□ 0.6
TRA2B-208ENST00000465245 C14orf37Q86TY3 774 aa18.78■□□□□ 0.6
TRA2B-208ENST00000465245 SPATA31A6Q5VVP1 1343 aa18.77■□□□□ 0.6
TRA2B-208ENST00000465245 UNC13BO14795 1591 aa18.76■□□□□ 0.59
TRA2B-208ENST00000465245 TBX22Q9Y458 520 aa18.75■□□□□ 0.59
TRA2B-208ENST00000465245 E9PCH4 1651 aa18.75■□□□□ 0.59
TRA2B-208ENST00000465245 CHGAP10645 457 aaKnown RBP18.74■□□□□ 0.59
TRA2B-208ENST00000465245 ZNF772Q68DY9 489 aaPredicted RBP18.74■□□□□ 0.59
TRA2B-208ENST00000465245 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.74■□□□□ 0.59
TRA2B-208ENST00000465245 ADAMTS13Q76LX8 1427 aa18.74■□□□□ 0.59
TRA2B-208ENST00000465245 CADPS2Q86UW7 1296 aa18.73■□□□□ 0.59
TRA2B-208ENST00000465245 ATF3P18847 181 aa18.72■□□□□ 0.59
TRA2B-208ENST00000465245 FAM50AQ14320 339 aaKnown RBP18.72■□□□□ 0.59
TRA2B-208ENST00000465245 TRIM52Q96A61 297 aa18.72■□□□□ 0.59
TRA2B-208ENST00000465245 TRPM2O94759 1503 aa18.72■□□□□ 0.59
TRA2B-208ENST00000465245 PIK3R4Q99570 1358 aa18.71■□□□□ 0.59
TRA2B-208ENST00000465245 NUTM2DQ5VT03 806 aaPredicted RBP18.71■□□□□ 0.59
TRA2B-208ENST00000465245 C19orf44Q9H6X5 657 aa18.71■□□□□ 0.59
TRA2B-208ENST00000465245 UPF1Q92900 1129 aaKnown RBP eCLIP18.7■□□□□ 0.58
TRA2B-208ENST00000465245 IQGAP3Q86VI3 1631 aa18.68■□□□□ 0.58
TRA2B-208ENST00000465245 ASXL1Q8IXJ9 1541 aa18.66■□□□□ 0.58
TRA2B-208ENST00000465245 NHSL1Q5SYE7 1610 aa18.66■□□□□ 0.58
TRA2B-208ENST00000465245 XRN1Q8IZH2 1706 aaKnown RBP18.66■□□□□ 0.58
TRA2B-208ENST00000465245 RXRBP28702 533 aa18.65■□□□□ 0.58
TRA2B-208ENST00000465245 BRINP3Q76B58 766 aa18.65■□□□□ 0.58
TRA2B-208ENST00000465245 DCCP43146 1447 aa18.65■□□□□ 0.58
TRA2B-208ENST00000465245 PTPRUQ92729 1446 aa18.65■□□□□ 0.58
TRA2B-208ENST00000465245 CDK12Q9NYV4 1490 aaPredicted RBP18.65■□□□□ 0.58
TRA2B-208ENST00000465245 NRXN3Q9Y4C0 1643 aa18.64■□□□□ 0.57
TRA2B-208ENST00000465245 NUTM2BA6NNL0 878 aaPredicted RBP18.64■□□□□ 0.57
TRA2B-208ENST00000465245 NUTM2EB1AL46 878 aaPredicted RBP18.64■□□□□ 0.57
TRA2B-208ENST00000465245 NUTM2AQ8IVF1 878 aaPredicted RBP18.64■□□□□ 0.57
TRA2B-208ENST00000465245 AMOTL2Q9Y2J4 779 aa18.64■□□□□ 0.57
TRA2B-208ENST00000465245 AFF2P51816 1311 aa18.61■□□□□ 0.57
TRA2B-208ENST00000465245 SPHKAPQ2M3C7 1700 aa18.6■□□□□ 0.57
TRA2B-208ENST00000465245 SETBP1Q9Y6X0 1596 aa18.6■□□□□ 0.57
TRA2B-208ENST00000465245 SETD5Q9C0A6 1442 aa18.6■□□□□ 0.57
TRA2B-208ENST00000465245 MST1RQ04912 1400 aa18.59■□□□□ 0.57
TRA2B-208ENST00000465245 NALCNQ8IZF0 1738 aa18.57■□□□□ 0.56
TRA2B-208ENST00000465245 ROCK1Q13464 1354 aa18.57■□□□□ 0.56
TRA2B-208ENST00000465245 NUP155O75694 1391 aa18.56■□□□□ 0.56
TRA2B-208ENST00000465245 RGS12O14924 1447 aa18.56■□□□□ 0.56
TRA2B-208ENST00000465245 SRCAPQ6ZRS2 3230 aa18.55■□□□□ 0.56
TRA2B-208ENST00000465245 LRRC59Q96AG4 307 aaKnown RBP18.54■□□□□ 0.56
TRA2B-208ENST00000465245 C8orf37Q96NL8 207 aa18.54■□□□□ 0.56
TRA2B-208ENST00000465245 ADGRL3Q9HAR2 1447 aa18.53■□□□□ 0.56
TRA2B-208ENST00000465245 PNPLA6Q8IY17 1366 aa18.53■□□□□ 0.56
TRA2B-208ENST00000465245 METP08581 1390 aa18.52■□□□□ 0.55
TRA2B-208ENST00000465245 RBM6P78332 1123 aaKnown RBP18.51■□□□□ 0.55
TRA2B-208ENST00000465245 ZNF326Q5BKZ1 582 aaKnown RBP18.51■□□□□ 0.55
TRA2B-208ENST00000465245 DDX17Q92841 729 aaKnown RBP18.51■□□□□ 0.55
TRA2B-208ENST00000465245 QTRT2Q9H974 415 aaKnown RBP18.5■□□□□ 0.55
TRA2B-208ENST00000465245 KIF1BO60333 1816 aa18.49■□□□□ 0.55
TRA2B-208ENST00000465245 NEXMIFQ5QGS0 1516 aa18.49■□□□□ 0.55
TRA2B-208ENST00000465245 LAMC1P11047 1609 aa18.48■□□□□ 0.55
TRA2B-208ENST00000465245 CLTCL1P53675 1640 aa18.47■□□□□ 0.55
TRA2B-208ENST00000465245 EP400Q96L91 3159 aa18.46■□□□□ 0.55
TRA2B-208ENST00000465245 C1orf167Q5SNV9 1468 aa18.46■□□□□ 0.54
TRA2B-208ENST00000465245 ADAMTS2O95450 1211 aa18.45■□□□□ 0.54
TRA2B-208ENST00000465245 ITGAEP38570 1179 aa18.45■□□□□ 0.54
TRA2B-208ENST00000465245 NGLY1Q96IV0 654 aa18.45■□□□□ 0.54
TRA2B-208ENST00000465245 ATAD2Q6PL18 1390 aa18.42■□□□□ 0.54
TRA2B-208ENST00000465245 PTCH1Q13635 1447 aa18.42■□□□□ 0.54
TRA2B-208ENST00000465245 USP21Q9UK80 565 aa18.4■□□□□ 0.54
TRA2B-208ENST00000465245 COL22A1Q8NFW1 1626 aaPredicted RBP18.4■□□□□ 0.54
TRA2B-208ENST00000465245 SOS2Q07890 1332 aaPredicted RBP18.39■□□□□ 0.53
TRA2B-208ENST00000465245 MARF1Q9Y4F3 1742 aaKnown RBP18.38■□□□□ 0.53
TRA2B-208ENST00000465245 TRPC5Q9UL62 973 aaPredicted RBP18.38■□□□□ 0.53
TRA2B-208ENST00000465245 ORAI2Q96SN7 254 aa18.37■□□□□ 0.53
TRA2B-208ENST00000465245 ROBO2Q9HCK4 1378 aa18.37■□□□□ 0.53
TRA2B-208ENST00000465245 ATRNO75882 1429 aa18.36■□□□□ 0.53
TRA2B-208ENST00000465245 PRAG1Q86YV5 1406 aa18.35■□□□□ 0.53
TRA2B-208ENST00000465245 FNBP4Q8N3X1 1017 aaPredicted RBP18.34■□□□□ 0.53
TRA2B-208ENST00000465245 PPLO60437 1756 aa18.34■□□□□ 0.53
TRA2B-208ENST00000465245 FOXD1Q16676 465 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms