RNA–Protein interactions for RNA: ENST00000464256.1

PAXBP1-206, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 1,692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-206ENST00000464256 RIMS2Q9UQ26 1411 aa37.34■■■■□ 3.57
PAXBP1-206ENST00000464256 MED14O60244 1454 aa37.31■■■■□ 3.56
PAXBP1-206ENST00000464256 NPHP4O75161 1426 aaPredicted RBP37.3■■■■□ 3.56
PAXBP1-206ENST00000464256 DHX57Q6P158 1386 aaKnown RBP37.28■■■■□ 3.56
PAXBP1-206ENST00000464256 ZNF326Q5BKZ1 582 aaKnown RBP37.28■■■■□ 3.56
PAXBP1-206ENST00000464256 NEXMIFQ5QGS0 1516 aa37.27■■■■□ 3.56
PAXBP1-206ENST00000464256 SPATA31E1Q6ZUB1 1445 aa37.25■■■■□ 3.55
PAXBP1-206ENST00000464256 EID1Q9Y6B2 187 aa37.25■■■■□ 3.55
PAXBP1-206ENST00000464256 DMRT2Q9Y5R5 561 aa37.24■■■■□ 3.55
PAXBP1-206ENST00000464256 PPLO60437 1756 aa37.22■■■■□ 3.55
PAXBP1-206ENST00000464256 RGL3Q3MIN7 710 aa37.21■■■■□ 3.55
PAXBP1-206ENST00000464256 IFT172Q9UG01 1749 aa37.18■■■■□ 3.54
PAXBP1-206ENST00000464256 PPP1R15AO75807 674 aaPredicted RBP37.16■■■■□ 3.54
PAXBP1-206ENST00000464256 NRXN3Q9Y4C0 1643 aa37.13■■■■□ 3.53
PAXBP1-206ENST00000464256 ZNF335Q9H4Z2 1342 aaPredicted RBP37.12■■■■□ 3.53
PAXBP1-206ENST00000464256 PLEKHG1Q9ULL1 1385 aa37.12■■■■□ 3.53
PAXBP1-206ENST00000464256 SLC26A8Q96RN1 970 aa37.12■■■■□ 3.53
PAXBP1-206ENST00000464256 STRCP1A6NGW2 1772 aa37.11■■■■□ 3.53
PAXBP1-206ENST00000464256 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.11■■■■□ 3.53
PAXBP1-206ENST00000464256 BCANQ96GW7 911 aa37.08■■■■□ 3.53
PAXBP1-206ENST00000464256 SIN3AQ96ST3 1273 aa37.07■■■■□ 3.52
PAXBP1-206ENST00000464256 HDGFP51858 240 aaKnown RBP37.06■■■■□ 3.52
PAXBP1-206ENST00000464256 LTBP4Q8N2S1 1624 aa37.05■■■■□ 3.52
PAXBP1-206ENST00000464256 ADAMTS13Q76LX8 1427 aa37.05■■■■□ 3.52
PAXBP1-206ENST00000464256 RPGRIP1LQ68CZ1 1315 aa37.02■■■■□ 3.52
PAXBP1-206ENST00000464256 SETBP1Q9Y6X0 1596 aa37.02■■■■□ 3.52
PAXBP1-206ENST00000464256 ADGRF5Q8IZF2 1346 aa37■■■■□ 3.51
PAXBP1-206ENST00000464256 SETD1AO15047 1707 aaKnown RBP36.97■■■■□ 3.51
PAXBP1-206ENST00000464256 VGFO15240 615 aaPredicted RBP36.94■■■■□ 3.5
PAXBP1-206ENST00000464256 NEUROD1Q13562 356 aa36.94■■■■□ 3.5
PAXBP1-206ENST00000464256 CHD2O14647 1828 aaKnown RBP36.94■■■■□ 3.5
PAXBP1-206ENST00000464256 DIP2AQ14689 1571 aa36.92■■■■□ 3.5
PAXBP1-206ENST00000464256 ALKQ9UM73 1620 aa36.9■■■■□ 3.5
PAXBP1-206ENST00000464256 MYOM2P54296 1465 aa36.88■■■■□ 3.49
PAXBP1-206ENST00000464256 KDM2AQ9Y2K7 1162 aa36.88■■■■□ 3.49
PAXBP1-206ENST00000464256 TBX22Q9Y458 520 aa36.88■■■■□ 3.49
PAXBP1-206ENST00000464256 DCAF11Q8TEB1 546 aa36.87■■■■□ 3.49
PAXBP1-206ENST00000464256 METP08581 1390 aa36.87■■■■□ 3.49
PAXBP1-206ENST00000464256 NRXN1Q9ULB1 1477 aa36.86■■■■□ 3.49
PAXBP1-206ENST00000464256 PIK3C2GO75747 1445 aa36.86■■■■□ 3.49
PAXBP1-206ENST00000464256 NWD1Q149M9 1564 aa36.86■■■■□ 3.49
PAXBP1-206ENST00000464256 PTPRUQ92729 1446 aa36.85■■■■□ 3.49
PAXBP1-206ENST00000464256 XIRP1Q702N8 1843 aaKnown RBP36.83■■■■□ 3.49
PAXBP1-206ENST00000464256 CPS1P31327 1500 aa36.8■■■■□ 3.48
PAXBP1-206ENST00000464256 CERKQ8TCT0 537 aa36.8■■■■□ 3.48
PAXBP1-206ENST00000464256 ASXL1Q8IXJ9 1541 aa36.79■■■■□ 3.48
PAXBP1-206ENST00000464256 KCNA6P17658 529 aa36.79■■■■□ 3.48
PAXBP1-206ENST00000464256 LRRC7Q96NW7 1537 aa36.78■■■■□ 3.48
PAXBP1-206ENST00000464256 L3MBTL2Q969R5 705 aa36.77■■■■□ 3.48
PAXBP1-206ENST00000464256 RBM33Q96EV2 1170 aaKnown RBP36.77■■■■□ 3.48
PAXBP1-206ENST00000464256 XRN1Q8IZH2 1706 aaKnown RBP36.77■■■■□ 3.48
PAXBP1-206ENST00000464256 CFAP70Q5T0N1 1121 aa36.73■■■■□ 3.47
PAXBP1-206ENST00000464256 PIK3R4Q99570 1358 aa36.72■■■■□ 3.47
PAXBP1-206ENST00000464256 AMOTL2Q9Y2J4 779 aa36.71■■■■□ 3.47
PAXBP1-206ENST00000464256 TMEM132EQ6IEE7 984 aa36.7■■■■□ 3.47
PAXBP1-206ENST00000464256 NKTRP30414 1462 aaKnown RBP36.69■■■■□ 3.46
PAXBP1-206ENST00000464256 LAMC1P11047 1609 aa36.69■■■■□ 3.46
PAXBP1-206ENST00000464256 CCER1Q8TC90 406 aaPredicted RBP36.67■■■■□ 3.46
PAXBP1-206ENST00000464256 C14orf93Q9H972 538 aaKnown RBP36.67■■■■□ 3.46
PAXBP1-206ENST00000464256 PRAG1Q86YV5 1406 aa36.64■■■■□ 3.46
PAXBP1-206ENST00000464256 TMEM94Q12767 1356 aa36.64■■■■□ 3.46
PAXBP1-206ENST00000464256 PROSER2Q86WR7 435 aaPredicted RBP36.64■■■■□ 3.46
PAXBP1-206ENST00000464256 ADGRB1O14514 1584 aa36.61■■■■□ 3.45
PAXBP1-206ENST00000464256 TONSLQ96HA7 1378 aa36.6■■■■□ 3.45
PAXBP1-206ENST00000464256 STK26Q9P289 416 aa36.59■■■■□ 3.45
PAXBP1-206ENST00000464256 STAC3Q96MF2 364 aa36.58■■■■□ 3.45
PAXBP1-206ENST00000464256 IQSEC2Q5JU85 1478 aa36.57■■■■□ 3.44
PAXBP1-206ENST00000464256 ROBO2Q9HCK4 1378 aa36.57■■■■□ 3.44
PAXBP1-206ENST00000464256 KNDC1Q76NI1 1749 aa36.56■■■■□ 3.44
PAXBP1-206ENST00000464256 YTHDC2Q9H6S0 1430 aaKnown RBP36.55■■■■□ 3.44
PAXBP1-206ENST00000464256 KIAA1210Q9ULL0 1709 aa36.55■■■■□ 3.44
PAXBP1-206ENST00000464256 CLSPNQ9HAW4 1339 aa36.54■■■■□ 3.44
PAXBP1-206ENST00000464256 TRPM1Q7Z4N2 1603 aa36.52■■■■□ 3.44
PAXBP1-206ENST00000464256 LRPPRCP42704 1394 aaKnown RBP36.52■■■■□ 3.44
PAXBP1-206ENST00000464256 NBPF1Q3BBV0 1214 aa36.51■■■■□ 3.44
PAXBP1-206ENST00000464256 NBPF8Q3BBV2 869 aa36.51■■■■□ 3.44
PAXBP1-206ENST00000464256 PTCH1Q13635 1447 aa36.51■■■■□ 3.43
PAXBP1-206ENST00000464256 NALCNQ8IZF0 1738 aa36.5■■■■□ 3.43
PAXBP1-206ENST00000464256 TECPR2O15040 1411 aa36.47■■■■□ 3.43
PAXBP1-206ENST00000464256 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.47■■■■□ 3.43
PAXBP1-206ENST00000464256 PLEKHH1Q9ULM0 1364 aa36.46■■■■□ 3.43
PAXBP1-206ENST00000464256 ABCC11Q96J66 1382 aa36.46■■■■□ 3.43
PAXBP1-206ENST00000464256 WAPLQ7Z5K2 1190 aa36.45■■■■□ 3.42
PAXBP1-206ENST00000464256 UBAP1LF5GYI3 381 aa36.43■■■■□ 3.42
PAXBP1-206ENST00000464256 C14orf37Q86TY3 774 aa36.42■■■■□ 3.42
PAXBP1-206ENST00000464256 TRAK1Q9UPV9 953 aa36.41■■■■□ 3.42
PAXBP1-206ENST00000464256 ARHGEF28Q8N1W1 1705 aaKnown RBP36.41■■■■□ 3.42
PAXBP1-206ENST00000464256 MSH6P52701 1360 aa36.37■■■■□ 3.41
PAXBP1-206ENST00000464256 NCOA3Q9Y6Q9 1424 aa36.37■■■■□ 3.41
PAXBP1-206ENST00000464256 FBXO41Q8TF61 875 aa36.36■■■■□ 3.41
PAXBP1-206ENST00000464256 ADGRL3Q9HAR2 1447 aa36.36■■■■□ 3.41
PAXBP1-206ENST00000464256 DLC1Q96QB1 1528 aa36.35■■■■□ 3.41
PAXBP1-206ENST00000464256 SAFB2Q14151 953 aaKnown RBP eCLIP36.34■■■■□ 3.41
PAXBP1-206ENST00000464256 PRAM1Q96QH2 718 aa36.32■■■■□ 3.41
PAXBP1-206ENST00000464256 FAM135BQ49AJ0 1406 aa36.31■■■■□ 3.4
PAXBP1-206ENST00000464256 PIP4K2BP78356 416 aa36.31■■■■□ 3.4
PAXBP1-206ENST00000464256 C19orf44Q9H6X5 657 aa36.31■■■■□ 3.4
PAXBP1-206ENST00000464256 ROCK2O75116 1388 aaKnown RBP36.29■■■■□ 3.4
PAXBP1-206ENST00000464256 ILDR1Q86SU0 546 aaPredicted RBP36.29■■■■□ 3.4
PAXBP1-206ENST00000464256 TOM1O60784 492 aa36.29■■■■□ 3.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms