RNA–Protein interactions for RNA: ENST00000464045.1

THUMPD3-208, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-208ENST00000464045 E9PCH4 1651 aa11.17□□□□□ -0.62
THUMPD3-208ENST00000464045 TXNDC2Q86VQ3 553 aa11.15□□□□□ -0.62
THUMPD3-208ENST00000464045 IQGAP1P46940 1657 aa11.14□□□□□ -0.63
THUMPD3-208ENST00000464045 TOM1O60784 492 aa11.14□□□□□ -0.63
THUMPD3-208ENST00000464045 LTKP29376 864 aa11.14□□□□□ -0.63
THUMPD3-208ENST00000464045 CPS1P31327 1500 aa11.14□□□□□ -0.63
THUMPD3-208ENST00000464045 HDGFP51858 240 aaKnown RBP11.13□□□□□ -0.63
THUMPD3-208ENST00000464045 ZFYVE9O95405 1425 aa11.12□□□□□ -0.63
THUMPD3-208ENST00000464045 TRIM52Q96A61 297 aa11.12□□□□□ -0.63
THUMPD3-208ENST00000464045 TMEM131LA2VDJ0 1609 aa11.12□□□□□ -0.63
THUMPD3-208ENST00000464045 TRPM2O94759 1503 aa11.11□□□□□ -0.63
THUMPD3-208ENST00000464045 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.11□□□□□ -0.63
THUMPD3-208ENST00000464045 SETD5Q9C0A6 1442 aa11.1□□□□□ -0.63
THUMPD3-208ENST00000464045 SPHKAPQ2M3C7 1700 aa11.1□□□□□ -0.63
THUMPD3-208ENST00000464045 SLC4A1APQ9BWU0 796 aaKnown RBP11.1□□□□□ -0.63
THUMPD3-208ENST00000464045 MED1Q15648 1581 aaPredicted RBP11.1□□□□□ -0.63
THUMPD3-208ENST00000464045 STRCP1A6NGW2 1772 aa11.1□□□□□ -0.63
THUMPD3-208ENST00000464045 RIMS2Q9UQ26 1411 aa11.09□□□□□ -0.63
THUMPD3-208ENST00000464045 PLEKHG1Q9ULL1 1385 aa11.09□□□□□ -0.63
THUMPD3-208ENST00000464045 PPP1R15AO75807 674 aaPredicted RBP11.07□□□□□ -0.64
THUMPD3-208ENST00000464045 CHGAP10645 457 aaKnown RBP11.07□□□□□ -0.64
THUMPD3-208ENST00000464045 ALKQ9UM73 1620 aa11.06□□□□□ -0.64
THUMPD3-208ENST00000464045 HRCP23327 699 aa11.06□□□□□ -0.64
THUMPD3-208ENST00000464045 CLTCL1P53675 1640 aa11.06□□□□□ -0.64
THUMPD3-208ENST00000464045 LRRC7Q96NW7 1537 aa11.05□□□□□ -0.64
THUMPD3-208ENST00000464045 RBM33Q96EV2 1170 aaKnown RBP11.05□□□□□ -0.64
THUMPD3-208ENST00000464045 MPHOSPH9Q99550 1183 aa11.05□□□□□ -0.64
THUMPD3-208ENST00000464045 RAB3GAP2Q9H2M9 1393 aa11.04□□□□□ -0.64
THUMPD3-208ENST00000464045 DIP2AQ14689 1571 aa11.04□□□□□ -0.64
THUMPD3-208ENST00000464045 KCNA6P17658 529 aa11.04□□□□□ -0.64
THUMPD3-208ENST00000464045 TBX22Q9Y458 520 aa11.04□□□□□ -0.64
THUMPD3-208ENST00000464045 MYO5BQ9ULV0 1848 aa11.04□□□□□ -0.64
THUMPD3-208ENST00000464045 BCANQ96GW7 911 aa11.03□□□□□ -0.64
THUMPD3-208ENST00000464045 SLC26A8Q96RN1 970 aa11.03□□□□□ -0.64
THUMPD3-208ENST00000464045 PIK3R4Q99570 1358 aa11.03□□□□□ -0.64
THUMPD3-208ENST00000464045 CCDC144AA2RUR9 1427 aa11.02□□□□□ -0.64
THUMPD3-208ENST00000464045 NKTRP30414 1462 aaKnown RBP11.02□□□□□ -0.65
THUMPD3-208ENST00000464045 ZNF326Q5BKZ1 582 aaKnown RBP11.02□□□□□ -0.65
THUMPD3-208ENST00000464045 RPGRIP1LQ68CZ1 1315 aa11.02□□□□□ -0.65
THUMPD3-208ENST00000464045 NWD1Q149M9 1564 aa11.02□□□□□ -0.65
THUMPD3-208ENST00000464045 ADAMTS13Q76LX8 1427 aa11.01□□□□□ -0.65
THUMPD3-208ENST00000464045 NEXMIFQ5QGS0 1516 aa11□□□□□ -0.65
THUMPD3-208ENST00000464045 SETBP1Q9Y6X0 1596 aa11□□□□□ -0.65
THUMPD3-208ENST00000464045 KIF1BO60333 1816 aa11□□□□□ -0.65
THUMPD3-208ENST00000464045 VGFO15240 615 aaPredicted RBP10.99□□□□□ -0.65
THUMPD3-208ENST00000464045 NUTM2DQ5VT03 806 aaPredicted RBP10.99□□□□□ -0.65
THUMPD3-208ENST00000464045 XIRP1Q702N8 1843 aaKnown RBP10.98□□□□□ -0.65
THUMPD3-208ENST00000464045 NCOA3Q9Y6Q9 1424 aa10.98□□□□□ -0.65
THUMPD3-208ENST00000464045 PROSER2Q86WR7 435 aaPredicted RBP10.97□□□□□ -0.65
THUMPD3-208ENST00000464045 TMEM94Q12767 1356 aa10.97□□□□□ -0.65
THUMPD3-208ENST00000464045 SPATA31E1Q6ZUB1 1445 aa10.97□□□□□ -0.65
THUMPD3-208ENST00000464045 NRXN3Q9Y4C0 1643 aa10.96□□□□□ -0.65
THUMPD3-208ENST00000464045 ANKRD30BQ9BXX2 1392 aa10.96□□□□□ -0.65
THUMPD3-208ENST00000464045 RGS17Q9UGC6 210 aaPredicted RBP10.96□□□□□ -0.65
THUMPD3-208ENST00000464045 CHD2O14647 1828 aaKnown RBP10.95□□□□□ -0.66
THUMPD3-208ENST00000464045 MSH6P52701 1360 aa10.93□□□□□ -0.66
THUMPD3-208ENST00000464045 AMOTL2Q9Y2J4 779 aa10.93□□□□□ -0.66
THUMPD3-208ENST00000464045 PPLO60437 1756 aa10.93□□□□□ -0.66
THUMPD3-208ENST00000464045 PRAG1Q86YV5 1406 aa10.92□□□□□ -0.66
THUMPD3-208ENST00000464045 PTPRUQ92729 1446 aa10.92□□□□□ -0.66
THUMPD3-208ENST00000464045 METP08581 1390 aa10.92□□□□□ -0.66
THUMPD3-208ENST00000464045 POTEHQ6S545 545 aa10.92□□□□□ -0.66
THUMPD3-208ENST00000464045 XRN1Q8IZH2 1706 aaKnown RBP10.92□□□□□ -0.66
THUMPD3-208ENST00000464045 RGL3Q3MIN7 710 aa10.91□□□□□ -0.66
THUMPD3-208ENST00000464045 POTEAQ6S8J7 498 aa10.91□□□□□ -0.66
THUMPD3-208ENST00000464045 ROBO1Q9Y6N7 1651 aa10.91□□□□□ -0.66
THUMPD3-208ENST00000464045 FAM135BQ49AJ0 1406 aa10.91□□□□□ -0.66
THUMPD3-208ENST00000464045 MYOM2P54296 1465 aa10.9□□□□□ -0.66
THUMPD3-208ENST00000464045 C19orf44Q9H6X5 657 aa10.9□□□□□ -0.66
THUMPD3-208ENST00000464045 PIK3C2GO75747 1445 aa10.9□□□□□ -0.66
THUMPD3-208ENST00000464045 DCCP43146 1447 aa10.9□□□□□ -0.66
THUMPD3-208ENST00000464045 PTCH1Q13635 1447 aa10.9□□□□□ -0.66
THUMPD3-208ENST00000464045 ADGRF5Q8IZF2 1346 aa10.89□□□□□ -0.67
THUMPD3-208ENST00000464045 C14orf37Q86TY3 774 aa10.89□□□□□ -0.67
THUMPD3-208ENST00000464045 STAC3Q96MF2 364 aa10.89□□□□□ -0.67
THUMPD3-208ENST00000464045 IFT172Q9UG01 1749 aa10.89□□□□□ -0.67
THUMPD3-208ENST00000464045 NRXN1Q9ULB1 1477 aa10.88□□□□□ -0.67
THUMPD3-208ENST00000464045 SETD1AO15047 1707 aaKnown RBP10.88□□□□□ -0.67
THUMPD3-208ENST00000464045 CADPS2Q86UW7 1296 aa10.88□□□□□ -0.67
THUMPD3-208ENST00000464045 SLAIN2Q9P270 581 aa10.87□□□□□ -0.67
THUMPD3-208ENST00000464045 ATF3P18847 181 aa10.86□□□□□ -0.67
THUMPD3-208ENST00000464045 PHLPP1O60346 1717 aa10.86□□□□□ -0.67
THUMPD3-208ENST00000464045 TECPR2O15040 1411 aa10.85□□□□□ -0.67
THUMPD3-208ENST00000464045 ADGRL3Q9HAR2 1447 aa10.85□□□□□ -0.67
THUMPD3-208ENST00000464045 TRIM26Q12899 539 aaPredicted RBP10.85□□□□□ -0.67
THUMPD3-208ENST00000464045 LRPPRCP42704 1394 aaKnown RBP10.85□□□□□ -0.67
THUMPD3-208ENST00000464045 ROBO2Q9HCK4 1378 aa10.85□□□□□ -0.67
THUMPD3-208ENST00000464045 LAMC1P11047 1609 aa10.84□□□□□ -0.67
THUMPD3-208ENST00000464045 C14orf93Q9H972 538 aaKnown RBP10.84□□□□□ -0.67
THUMPD3-208ENST00000464045 ABCC11Q96J66 1382 aa10.84□□□□□ -0.67
THUMPD3-208ENST00000464045 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.84□□□□□ -0.67
THUMPD3-208ENST00000464045 MEX3CQ5U5Q3 659 aaKnown RBP10.83□□□□□ -0.68
THUMPD3-208ENST00000464045 SIRT1Q96EB6 747 aa10.82□□□□□ -0.68
THUMPD3-208ENST00000464045 ASXL1Q8IXJ9 1541 aa10.82□□□□□ -0.68
THUMPD3-208ENST00000464045 YTHDC2Q9H6S0 1430 aaKnown RBP10.82□□□□□ -0.68
THUMPD3-208ENST00000464045 DHX57Q6P158 1386 aaKnown RBP10.81□□□□□ -0.68
THUMPD3-208ENST00000464045 NUTM2BA6NNL0 878 aaPredicted RBP10.81□□□□□ -0.68
THUMPD3-208ENST00000464045 NUTM2EB1AL46 878 aaPredicted RBP10.81□□□□□ -0.68
THUMPD3-208ENST00000464045 MAPK8IP2Q13387 824 aaPredicted RBP10.81□□□□□ -0.68
THUMPD3-208ENST00000464045 NUTM2AQ8IVF1 878 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms