RNA–Protein interactions for RNA: ENST00000463783.1

NCBP2-209, Transcript of nuclear cap binding protein subunit 2, humanhuman

TSL 1 (best)

Gene NCBP2, Length 4,161 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2-209ENST00000463783 NEXMIFQ5QGS0 1516 aa11.52□□□□□ -0.57
NCBP2-209ENST00000463783 PKD2Q13563 968 aa11.51□□□□□ -0.57
NCBP2-209ENST00000463783 NPATQ14207 1427 aa11.51□□□□□ -0.57
NCBP2-209ENST00000463783 KIF15Q9NS87 1388 aa11.51□□□□□ -0.57
NCBP2-209ENST00000463783 CDK11AQ9UQ88 783 aaPredicted RBP11.51□□□□□ -0.57
NCBP2-209ENST00000463783 ANKRD50Q9ULJ7 1429 aa11.51□□□□□ -0.57
NCBP2-209ENST00000463783 USP47Q96K76 1375 aa11.51□□□□□ -0.57
NCBP2-209ENST00000463783 ZBED9Q6R2W3 1325 aa11.5□□□□□ -0.57
NCBP2-209ENST00000463783 CFDP1Q9UEE9 299 aaPredicted RBP11.49□□□□□ -0.57
NCBP2-209ENST00000463783 EFCAB2Q5VUJ9 269 aa11.49□□□□□ -0.57
NCBP2-209ENST00000463783 LAMC1P11047 1609 aa11.49□□□□□ -0.57
NCBP2-209ENST00000463783 POLR3GLQ9BT43 218 aa11.48□□□□□ -0.57
NCBP2-209ENST00000463783 ASXL1Q8IXJ9 1541 aa11.48□□□□□ -0.57
NCBP2-209ENST00000463783 KNDC1Q76NI1 1749 aa11.48□□□□□ -0.57
NCBP2-209ENST00000463783 ERVK-7P63135 1459 aa11.46□□□□□ -0.57
NCBP2-209ENST00000463783 RSPH4AQ5TD94 716 aa11.45□□□□□ -0.58
NCBP2-209ENST00000463783 SLIT1O75093 1534 aa11.44□□□□□ -0.58
NCBP2-209ENST00000463783 PPP4R2Q9NY27 417 aa11.44□□□□□ -0.58
NCBP2-209ENST00000463783 ARHGAP23Q9P227 1491 aa11.44□□□□□ -0.58
NCBP2-209ENST00000463783 PNISRQ8TF01 805 aaKnown RBP11.44□□□□□ -0.58
NCBP2-209ENST00000463783 RALGAPBQ86X10 1494 aa11.44□□□□□ -0.58
NCBP2-209ENST00000463783 UHRF1BP1Q6BDS2 1440 aa11.44□□□□□ -0.58
NCBP2-209ENST00000463783 KDM2AQ9Y2K7 1162 aa11.43□□□□□ -0.58
NCBP2-209ENST00000463783 FANCIQ9NVI1 1328 aa11.43□□□□□ -0.58
NCBP2-209ENST00000463783 CHD2O14647 1828 aaKnown RBP11.43□□□□□ -0.58
NCBP2-209ENST00000463783 XRN1Q8IZH2 1706 aaKnown RBP11.43□□□□□ -0.58
NCBP2-209ENST00000463783 ST20-MTHFSA0A0A6YYL1 179 aa11.43□□□□□ -0.58
NCBP2-209ENST00000463783 SMG6Q86US8 1419 aaKnown RBP11.42□□□□□ -0.58
NCBP2-209ENST00000463783 RNF123Q5XPI4 1314 aa11.42□□□□□ -0.58
NCBP2-209ENST00000463783 NUP155O75694 1391 aa11.42□□□□□ -0.58
NCBP2-209ENST00000463783 ZFYVE9O95405 1425 aa11.42□□□□□ -0.58
NCBP2-209ENST00000463783 PAK3O75914 559 aaPredicted RBP11.42□□□□□ -0.58
NCBP2-209ENST00000463783 MED14O60244 1454 aa11.42□□□□□ -0.58
NCBP2-209ENST00000463783 ARHGEF28Q8N1W1 1705 aaKnown RBP11.42□□□□□ -0.58
NCBP2-209ENST00000463783 ANKRD30AQ9BXX3 1397 aa11.41□□□□□ -0.58
NCBP2-209ENST00000463783 ADGRB1O14514 1584 aa11.41□□□□□ -0.58
NCBP2-209ENST00000463783 CEP170BQ9Y4F5 1589 aaPredicted RBP11.41□□□□□ -0.58
NCBP2-209ENST00000463783 LMTK3Q96Q04 1460 aa11.41□□□□□ -0.58
NCBP2-209ENST00000463783 NBPF1Q3BBV0 1214 aa11.41□□□□□ -0.58
NCBP2-209ENST00000463783 PTPRMP28827 1452 aa11.41□□□□□ -0.58
NCBP2-209ENST00000463783 ALKQ9UM73 1620 aa11.41□□□□□ -0.58
NCBP2-209ENST00000463783 SETBP1Q9Y6X0 1596 aa11.4□□□□□ -0.58
NCBP2-209ENST00000463783 SKAP1Q86WV1 359 aa11.4□□□□□ -0.58
NCBP2-209ENST00000463783 BCL11AQ9H165 835 aa11.4□□□□□ -0.58
NCBP2-209ENST00000463783 PRAG1Q86YV5 1406 aa11.39□□□□□ -0.59
NCBP2-209ENST00000463783 KDM4FA0A1W2PPD8 638 aa11.39□□□□□ -0.59
NCBP2-209ENST00000463783 NPM1P06748 294 aaKnown RBP eCLIP11.38□□□□□ -0.59
NCBP2-209ENST00000463783 LRPPRCP42704 1394 aaKnown RBP11.38□□□□□ -0.59
NCBP2-209ENST00000463783 DCAF11Q8TEB1 546 aa11.38□□□□□ -0.59
NCBP2-209ENST00000463783 NWD1Q149M9 1564 aa11.38□□□□□ -0.59
NCBP2-209ENST00000463783 MYOM1P52179 1685 aa11.38□□□□□ -0.59
NCBP2-209ENST00000463783 MARF1Q9Y4F3 1742 aaKnown RBP11.37□□□□□ -0.59
NCBP2-209ENST00000463783 CARD11Q9BXL7 1154 aa11.37□□□□□ -0.59
NCBP2-209ENST00000463783 NUDCQ9Y266 331 aa11.37□□□□□ -0.59
NCBP2-209ENST00000463783 SPAG9O60271 1321 aaKnown RBP11.36□□□□□ -0.59
NCBP2-209ENST00000463783 SALL2Q9Y467 1007 aaPredicted RBP11.36□□□□□ -0.59
NCBP2-209ENST00000463783 SETD1BQ9UPS6 1966 aaKnown RBP11.35□□□□□ -0.59
NCBP2-209ENST00000463783 A2ML1A8K2U0 1454 aa11.35□□□□□ -0.59
NCBP2-209ENST00000463783 DISP3Q9P2K9 1392 aa11.35□□□□□ -0.59
NCBP2-209ENST00000463783 PER1O15534 1290 aaPredicted RBP11.35□□□□□ -0.59
NCBP2-209ENST00000463783 CDCA7LQ96GN5 454 aa11.35□□□□□ -0.59
NCBP2-209ENST00000463783 MYOM2P54296 1465 aa11.34□□□□□ -0.59
NCBP2-209ENST00000463783 TOPAZ1Q8N9V7 1692 aa11.33□□□□□ -0.6
NCBP2-209ENST00000463783 RGL3Q3MIN7 710 aa11.33□□□□□ -0.6
NCBP2-209ENST00000463783 ERICH6BQ5W0A0 696 aa11.32□□□□□ -0.6
NCBP2-209ENST00000463783 TESK2Q96S53 571 aa11.31□□□□□ -0.6
NCBP2-209ENST00000463783 EXOC6Q8TAG9 804 aa11.31□□□□□ -0.6
NCBP2-209ENST00000463783 USP32Q8NFA0 1604 aa11.31□□□□□ -0.6
NCBP2-209ENST00000463783 NALCNQ8IZF0 1738 aa11.3□□□□□ -0.6
NCBP2-209ENST00000463783 ROCK2O75116 1388 aaKnown RBP11.3□□□□□ -0.6
NCBP2-209ENST00000463783 PARD3Q8TEW0 1356 aa11.3□□□□□ -0.6
NCBP2-209ENST00000463783 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.3□□□□□ -0.6
NCBP2-209ENST00000463783 PLIN1O60240 522 aa11.29□□□□□ -0.6
NCBP2-209ENST00000463783 TMC1Q8TDI8 760 aa11.29□□□□□ -0.6
NCBP2-209ENST00000463783 CRYBG1Q9Y4K1 1723 aa11.28□□□□□ -0.6
NCBP2-209ENST00000463783 MYBBP1AQ9BQG0 1328 aaKnown RBP11.28□□□□□ -0.6
NCBP2-209ENST00000463783 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.27□□□□□ -0.62e-7■■■□□ 17.8
NCBP2-209ENST00000463783 ZMYM3Q14202 1370 aa11.27□□□□□ -0.61
NCBP2-209ENST00000463783 PIK3C2GO75747 1445 aa11.27□□□□□ -0.61
NCBP2-209ENST00000463783 CC2D1BQ5T0F9 858 aaKnown RBP11.27□□□□□ -0.61
NCBP2-209ENST00000463783 USP54Q70EL1 1684 aa11.27□□□□□ -0.61
NCBP2-209ENST00000463783 CPS1P31327 1500 aa11.26□□□□□ -0.61
NCBP2-209ENST00000463783 NLRP1Q9C000 1473 aa11.26□□□□□ -0.61
NCBP2-209ENST00000463783 ARID4BQ4LE39 1312 aaPredicted RBP11.26□□□□□ -0.61
NCBP2-209ENST00000463783 ADGRB2O60241 1585 aa11.26□□□□□ -0.61
NCBP2-209ENST00000463783 DIP2AQ14689 1571 aa11.26□□□□□ -0.61
NCBP2-209ENST00000463783 RGPD8O14715 1765 aaPredicted RBP11.26□□□□□ -0.61
NCBP2-209ENST00000463783 BRD4O60885 1362 aaPredicted RBP11.25□□□□□ -0.61
NCBP2-209ENST00000463783 C20orf194Q5TEA3 1177 aa11.25□□□□□ -0.61
NCBP2-209ENST00000463783 CCDC136Q96JN2 1154 aa11.25□□□□□ -0.61
NCBP2-209ENST00000463783 RRP1P56182 461 aaKnown RBP11.25□□□□□ -0.61
NCBP2-209ENST00000463783 TSPY4P0CV99 314 aa11.24□□□□□ -0.61
NCBP2-209ENST00000463783 TSPY10P0CW01 314 aa11.24□□□□□ -0.61
NCBP2-209ENST00000463783 GPRASP1Q5JY77 1395 aa11.24□□□□□ -0.61
NCBP2-209ENST00000463783 NRKQ7Z2Y5 1582 aa11.24□□□□□ -0.61
NCBP2-209ENST00000463783 NBR1Q14596 966 aa11.24□□□□□ -0.61
NCBP2-209ENST00000463783 PPP6R1Q9UPN7 881 aa11.24□□□□□ -0.61
NCBP2-209ENST00000463783 QRICH2Q9H0J4 1663 aa11.23□□□□□ -0.61
NCBP2-209ENST00000463783 LTBP4Q8N2S1 1624 aa11.23□□□□□ -0.61
NCBP2-209ENST00000463783 CCDC144AA2RUR9 1427 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms