RNA–Protein interactions for RNA: ENST00000463705.5

CHRNA4-202, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 5,201 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-202ENST00000463705 ELL2O00472 640 aaPredicted RBP16.68■□□□□ 0.26
CHRNA4-202ENST00000463705 TEFQ10587 303 aa16.68■□□□□ 0.26
CHRNA4-202ENST00000463705 API5Q9BZZ5 524 aaKnown RBP16.68■□□□□ 0.26
CHRNA4-202ENST00000463705 SNAPC4Q5SXM2 1469 aa16.68■□□□□ 0.26
CHRNA4-202ENST00000463705 BRD4O60885 1362 aaPredicted RBP16.68■□□□□ 0.26
CHRNA4-202ENST00000463705 CHMP4CQ96CF2 233 aa16.68■□□□□ 0.26
CHRNA4-202ENST00000463705 ISY1Q9ULR0 285 aaKnown RBP16.67■□□□□ 0.26
CHRNA4-202ENST00000463705 KIF3AQ9Y496 699 aa16.67■□□□□ 0.26
CHRNA4-202ENST00000463705 HSP90B1P14625 803 aaKnown RBP16.67■□□□□ 0.26
CHRNA4-202ENST00000463705 PDE4AP27815 886 aa16.67■□□□□ 0.26
CHRNA4-202ENST00000463705 AAMPQ13685 434 aa16.67■□□□□ 0.26
CHRNA4-202ENST00000463705 AFAP1Q8N556 730 aa16.67■□□□□ 0.26
CHRNA4-202ENST00000463705 SUPT6HQ7KZ85 1726 aaKnown RBP16.67■□□□□ 0.26
CHRNA4-202ENST00000463705 SCAPERQ9BY12 1400 aa16.67■□□□□ 0.26
CHRNA4-202ENST00000463705 COG6Q9Y2V7 657 aa16.66■□□□□ 0.26
CHRNA4-202ENST00000463705 KIAA1107Q9UPP5 1409 aa16.66■□□□□ 0.26
CHRNA4-202ENST00000463705 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.66■□□□□ 0.26
CHRNA4-202ENST00000463705 TPM4P67936 248 aa16.66■□□□□ 0.26
CHRNA4-202ENST00000463705 RIPK4P57078 832 aa16.63■□□□□ 0.25
CHRNA4-202ENST00000463705 KIF16BQ96L93 1317 aa16.63■□□□□ 0.25
CHRNA4-202ENST00000463705 NEXNQ0ZGT2 675 aa16.63■□□□□ 0.25
CHRNA4-202ENST00000463705 TTC5Q8N0Z6 440 aa16.63■□□□□ 0.25
CHRNA4-202ENST00000463705 GNAI1P63096 354 aa16.63■□□□□ 0.25
CHRNA4-202ENST00000463705 ABCA10Q8WWZ4 1543 aa16.63■□□□□ 0.25
CHRNA4-202ENST00000463705 GZF1Q9H116 711 aaPredicted RBP16.63■□□□□ 0.25
CHRNA4-202ENST00000463705 KIAA2012Q0VF49 1180 aa16.62■□□□□ 0.25
CHRNA4-202ENST00000463705 ANKRD45Q5TZF3 282 aa16.62■□□□□ 0.25
CHRNA4-202ENST00000463705 LRRFIP1Q32MZ4 808 aaKnown RBP16.62■□□□□ 0.25
CHRNA4-202ENST00000463705 LAMC3Q9Y6N6 1575 aa16.62■□□□□ 0.25
CHRNA4-202ENST00000463705 DZIP1LQ8IYY4 767 aaKnown RBP16.62■□□□□ 0.25
CHRNA4-202ENST00000463705 CUL7Q14999 1698 aa16.61■□□□□ 0.25
CHRNA4-202ENST00000463705 KIAA0586Q9BVV6 1533 aa16.61■□□□□ 0.25
CHRNA4-202ENST00000463705 PSME1Q06323 249 aa16.61■□□□□ 0.25
CHRNA4-202ENST00000463705 PHF14O94880 888 aa16.61■□□□□ 0.25
CHRNA4-202ENST00000463705 EVA1CP58658 441 aa16.61■□□□□ 0.25
CHRNA4-202ENST00000463705 GOLGA6L3A6NEY3 463 aa16.61■□□□□ 0.25
CHRNA4-202ENST00000463705 DDX11L8A8MPP1 907 aa16.61■□□□□ 0.25
CHRNA4-202ENST00000463705 DAPK1P53355 1430 aa16.6■□□□□ 0.25
CHRNA4-202ENST00000463705 DDX58O95786 925 aaKnown RBP16.6■□□□□ 0.25
CHRNA4-202ENST00000463705 TMEM132EQ6IEE7 984 aa16.59■□□□□ 0.25
CHRNA4-202ENST00000463705 CFAP70Q5T0N1 1121 aa16.58■□□□□ 0.25
CHRNA4-202ENST00000463705 GTF2E1P29083 439 aaPredicted RBP16.58■□□□□ 0.24
CHRNA4-202ENST00000463705 RUFY2Q8WXA3 655 aa16.58■□□□□ 0.24
CHRNA4-202ENST00000463705 USP35Q9P2H5 1018 aa16.58■□□□□ 0.24
CHRNA4-202ENST00000463705 NBPF8Q3BBV2 869 aa16.57■□□□□ 0.24
CHRNA4-202ENST00000463705 IQGAP2Q13576 1575 aa16.56■□□□□ 0.24
CHRNA4-202ENST00000463705 CABP2Q9NPB3 220 aa16.56■□□□□ 0.24
CHRNA4-202ENST00000463705 G3V3G9 751 aa16.56■□□□□ 0.24
CHRNA4-202ENST00000463705 REC8O95072 547 aa16.56■□□□□ 0.24
CHRNA4-202ENST00000463705 NBPF1Q3BBV0 1214 aa16.56■□□□□ 0.24
CHRNA4-202ENST00000463705 DCAF8Q5TAQ9 597 aa16.56■□□□□ 0.24
CHRNA4-202ENST00000463705 RILPL2Q969X0 211 aa16.56■□□□□ 0.24
CHRNA4-202ENST00000463705 GGNBP2Q9H3C7 697 aa16.56■□□□□ 0.24
CHRNA4-202ENST00000463705 ADAMTS8Q9UP79 889 aa16.56■□□□□ 0.24
CHRNA4-202ENST00000463705 C9orf78Q9NZ63 289 aaPredicted RBP16.55■□□□□ 0.24
CHRNA4-202ENST00000463705 ATP6V1DQ9Y5K8 247 aa16.55■□□□□ 0.24
CHRNA4-202ENST00000463705 FOXD4L1Q9NU39 408 aa16.55■□□□□ 0.24
CHRNA4-202ENST00000463705 DIAPH3Q9NSV4 1193 aa16.54■□□□□ 0.24
CHRNA4-202ENST00000463705 EPRSP07814 1512 aaKnown RBP16.54■□□□□ 0.24
CHRNA4-202ENST00000463705 FRAT2O75474 233 aaPredicted RBP16.54■□□□□ 0.24
CHRNA4-202ENST00000463705 HSP90AB4PQ58FF6 505 aa16.54■□□□□ 0.24
CHRNA4-202ENST00000463705 RPGRIP1LQ68CZ1 1315 aa16.53■□□□□ 0.24
CHRNA4-202ENST00000463705 BICRAQ9NZM4 1560 aa16.53■□□□□ 0.24
CHRNA4-202ENST00000463705 SKOR2Q2VWA4 1001 aaPredicted RBP16.53■□□□□ 0.24
CHRNA4-202ENST00000463705 NOL8Q76FK4 1167 aaKnown RBP16.53■□□□□ 0.24
CHRNA4-202ENST00000463705 ATF3P18847 181 aa16.52■□□□□ 0.24
CHRNA4-202ENST00000463705 EIF2S2P20042 333 aaKnown RBP16.52■□□□□ 0.24
CHRNA4-202ENST00000463705 PPP2R1AP30153 589 aa16.52■□□□□ 0.24
CHRNA4-202ENST00000463705 TSPYL4Q9UJ04 414 aa16.52■□□□□ 0.24
CHRNA4-202ENST00000463705 FANCIQ9NVI1 1328 aa16.52■□□□□ 0.23
CHRNA4-202ENST00000463705 CLSTN1O94985 981 aa16.52■□□□□ 0.23
CHRNA4-202ENST00000463705 SLC52A1Q9NWF4 448 aa16.51■□□□□ 0.23
CHRNA4-202ENST00000463705 MTHFSP49914 203 aa16.51■□□□□ 0.23
CHRNA4-202ENST00000463705 MAP3K1Q13233 1512 aa16.51■□□□□ 0.23
CHRNA4-202ENST00000463705 TOMM22Q9NS69 142 aa16.51■□□□□ 0.23
CHRNA4-202ENST00000463705 FKBP5Q13451 457 aaPredicted RBP16.5■□□□□ 0.23
CHRNA4-202ENST00000463705 RAPGEF4Q8WZA2 1011 aa16.5■□□□□ 0.23
CHRNA4-202ENST00000463705 IFIT2P09913 472 aaKnown RBP16.5■□□□□ 0.23
CHRNA4-202ENST00000463705 DNAJC5BQ9UF47 199 aa16.5■□□□□ 0.23
CHRNA4-202ENST00000463705 HMOX1P09601 288 aa16.5■□□□□ 0.23
CHRNA4-202ENST00000463705 SLC4A3P48751 1232 aa16.5■□□□□ 0.23
CHRNA4-202ENST00000463705 GPRASP1Q5JY77 1395 aa16.5■□□□□ 0.23
CHRNA4-202ENST00000463705 NAIPQ13075 1403 aa16.5■□□□□ 0.23
CHRNA4-202ENST00000463705 H3BQV1 296 aa16.49■□□□□ 0.23
CHRNA4-202ENST00000463705 IFFO2Q5TF58 517 aa16.49■□□□□ 0.23
CHRNA4-202ENST00000463705 ZKSCAN1P17029 563 aaPredicted RBP16.48■□□□□ 0.23
CHRNA4-202ENST00000463705 ANKRD30BQ9BXX2 1392 aa16.48■□□□□ 0.23
CHRNA4-202ENST00000463705 PCF11O94913 1555 aaKnown RBP16.48■□□□□ 0.23
CHRNA4-202ENST00000463705 CDK13Q14004 1512 aaKnown RBP16.48■□□□□ 0.23
CHRNA4-202ENST00000463705 SF3A1Q15459 793 aaKnown RBP16.48■□□□□ 0.23
CHRNA4-202ENST00000463705 FAM184AQ8NB25 1140 aa16.48■□□□□ 0.23
CHRNA4-202ENST00000463705 CCDC141Q6ZP82 1450 aa16.47■□□□□ 0.23
CHRNA4-202ENST00000463705 TCP11L2Q8N4U5 519 aa16.47■□□□□ 0.23
CHRNA4-202ENST00000463705 RASSF8Q8NHQ8 419 aa16.47■□□□□ 0.23
CHRNA4-202ENST00000463705 GAS2L2Q8NHY3 880 aa16.47■□□□□ 0.23
CHRNA4-202ENST00000463705 G3BP1Q13283 466 aaKnown RBP eCLIP16.47■□□□□ 0.23
CHRNA4-202ENST00000463705 ERBINQ96RT1 1412 aa16.46■□□□□ 0.23
CHRNA4-202ENST00000463705 INTS3Q68E01 1043 aaKnown RBP16.46■□□□□ 0.23
CHRNA4-202ENST00000463705 CDCA7LQ96GN5 454 aa16.46■□□□□ 0.23
CHRNA4-202ENST00000463705 SYNE3Q6ZMZ3 975 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms