RNA–Protein interactions for RNA: ENST00000463599.5

U2AF1-205, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 338 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-205ENST00000463599 NUTM1Q86Y26 1132 aa11.22□□□□□ -0.61
U2AF1-205ENST00000463599 TATDN2Q93075 761 aa11.21□□□□□ -0.61
U2AF1-205ENST00000463599 LIMD1Q9UGP4 676 aa11.21□□□□□ -0.61
U2AF1-205ENST00000463599 SPTLC1O15269 473 aa11.2□□□□□ -0.62
U2AF1-205ENST00000463599 FNBP4Q8N3X1 1017 aaPredicted RBP11.2□□□□□ -0.62
U2AF1-205ENST00000463599 PNMA3Q9UL41 463 aa11.2□□□□□ -0.62
U2AF1-205ENST00000463599 DDX11L8A8MPP1 907 aa11.19□□□□□ -0.62
U2AF1-205ENST00000463599 TRIM6-TRIM34B2RNG4 842 aa11.19□□□□□ -0.62
U2AF1-205ENST00000463599 SNPHO15079 494 aa11.19□□□□□ -0.62
U2AF1-205ENST00000463599 POM121Q96HA1 1249 aa11.19□□□□□ -0.62
U2AF1-205ENST00000463599 ZNF777Q9ULD5 760 aaPredicted RBP11.19□□□□□ -0.62
U2AF1-205ENST00000463599 GJA5P36382 358 aa11.18□□□□□ -0.62
U2AF1-205ENST00000463599 CCDC82Q8N4S0 544 aa11.18□□□□□ -0.62
U2AF1-205ENST00000463599 TMEM134Q9H6X4 195 aa11.18□□□□□ -0.62
U2AF1-205ENST00000463599 POTEB2H3BUK9 544 aa11.17□□□□□ -0.62
U2AF1-205ENST00000463599 RSBN1LQ6PCB5 846 aaPredicted RBP11.17□□□□□ -0.62
U2AF1-205ENST00000463599 SNRKQ9NRH2 765 aa11.17□□□□□ -0.62
U2AF1-205ENST00000463599 COG6Q9Y2V7 657 aa11.17□□□□□ -0.62
U2AF1-205ENST00000463599 RSPH4AQ5TD94 716 aa11.15□□□□□ -0.62
U2AF1-205ENST00000463599 HOXB1P14653 301 aaPredicted RBP11.14□□□□□ -0.63
U2AF1-205ENST00000463599 KCNH8Q96L42 1107 aa11.14□□□□□ -0.63
U2AF1-205ENST00000463599 PRM3Q9NNZ6 103 aa11.14□□□□□ -0.63
U2AF1-205ENST00000463599 SERPINA10Q9UK55 444 aa11.14□□□□□ -0.63
U2AF1-205ENST00000463599 MOXD2PA6NHM9 499 aa11.13□□□□□ -0.63
U2AF1-205ENST00000463599 C3orf80F5H4A9 247 aa11.13□□□□□ -0.63
U2AF1-205ENST00000463599 FBXO31Q5XUX0 539 aaPredicted RBP11.13□□□□□ -0.63
U2AF1-205ENST00000463599 CSPP1Q1MSJ5 1256 aa11.12□□□□□ -0.63
U2AF1-205ENST00000463599 RDH13Q8NBN7 331 aa11.12□□□□□ -0.63
U2AF1-205ENST00000463599 SOCS7O14512 581 aa11.11□□□□□ -0.63
U2AF1-205ENST00000463599 LILRB3O75022 631 aa11.11□□□□□ -0.63
U2AF1-205ENST00000463599 NDUFV2P19404 249 aa11.11□□□□□ -0.63
U2AF1-205ENST00000463599 WWC1Q8IX03 1113 aa11.11□□□□□ -0.63
U2AF1-205ENST00000463599 CCDC97Q96F63 343 aaPredicted RBP11.11□□□□□ -0.63
U2AF1-205ENST00000463599 PODXL2Q9NZ53 605 aa11.11□□□□□ -0.63
U2AF1-205ENST00000463599 ZNF330Q9Y3S2 320 aaPredicted RBP11.11□□□□□ -0.63
U2AF1-205ENST00000463599 KDM4AO75164 1064 aa11.1□□□□□ -0.63
U2AF1-205ENST00000463599 USP46P62068 366 aa11.1□□□□□ -0.63
U2AF1-205ENST00000463599 NUTM2BA6NNL0 878 aaPredicted RBP11.09□□□□□ -0.63
U2AF1-205ENST00000463599 NUTM2EB1AL46 878 aaPredicted RBP11.09□□□□□ -0.63
U2AF1-205ENST00000463599 SMAPO00193 183 aa11.09□□□□□ -0.63
U2AF1-205ENST00000463599 NUTM2DQ5VT03 806 aaPredicted RBP11.09□□□□□ -0.63
U2AF1-205ENST00000463599 PRPF38BQ5VTL8 546 aaKnown RBP11.09□□□□□ -0.63
U2AF1-205ENST00000463599 NUTM2AQ8IVF1 878 aaPredicted RBP11.09□□□□□ -0.63
U2AF1-205ENST00000463599 KCNK17Q96T54 332 aa11.09□□□□□ -0.63
U2AF1-205ENST00000463599 PDIA4P13667 645 aaKnown RBP11.08□□□□□ -0.64
U2AF1-205ENST00000463599 QPCTQ16769 361 aa11.08□□□□□ -0.64
U2AF1-205ENST00000463599 PROX2Q3B8N5 592 aa11.08□□□□□ -0.64
U2AF1-205ENST00000463599 MTMR14Q8NCE2 650 aa11.08□□□□□ -0.64
U2AF1-205ENST00000463599 PCDHB15Q9Y5E8 787 aa11.08□□□□□ -0.64
U2AF1-205ENST00000463599 AP1G2O75843 785 aa11.07□□□□□ -0.64
U2AF1-205ENST00000463599 GCGRP47871 477 aa11.07□□□□□ -0.64
U2AF1-205ENST00000463599 TRIM26Q12899 539 aaPredicted RBP11.07□□□□□ -0.64
U2AF1-205ENST00000463599 KIAA1468Q9P260 1216 aa11.07□□□□□ -0.64
U2AF1-205ENST00000463599 GDPD2Q9HCC8 539 aa11.06□□□□□ -0.64
U2AF1-205ENST00000463599 PLSCR2Q9NRY7 297 aa11.06□□□□□ -0.64
U2AF1-205ENST00000463599 HDGFP51858 240 aaKnown RBP11.05□□□□□ -0.64
U2AF1-205ENST00000463599 RTL5Q5HYW3 569 aaPredicted RBP11.05□□□□□ -0.64
U2AF1-205ENST00000463599 ZBTB3Q9H5J0 574 aa11.05□□□□□ -0.64
U2AF1-205ENST00000463599 ZBED2Q9BTP6 218 aa11.04□□□□□ -0.64
U2AF1-205ENST00000463599 HOXA2O43364 376 aa11.02□□□□□ -0.65
U2AF1-205ENST00000463599 FDX1P10109 184 aa11.02□□□□□ -0.65
U2AF1-205ENST00000463599 SLC4A3P48751 1232 aa11.02□□□□□ -0.65
U2AF1-205ENST00000463599 CABLES1Q8TDN4 633 aa11.02□□□□□ -0.65
U2AF1-205ENST00000463599 RABGEF1Q9UJ41 708 aa11.02□□□□□ -0.65
U2AF1-205ENST00000463599 HRCP23327 699 aa11.01□□□□□ -0.65
U2AF1-205ENST00000463599 ABL2P42684 1182 aa11.01□□□□□ -0.65
U2AF1-205ENST00000463599 USP17L8P0C7I0 530 aa11□□□□□ -0.65
U2AF1-205ENST00000463599 SWT1Q5T5J6 900 aaKnown RBP11□□□□□ -0.65
U2AF1-205ENST00000463599 ARHGAP33O14559 1287 aa10.99□□□□□ -0.65
U2AF1-205ENST00000463599 SLC4A5Q9BY07 1137 aa10.99□□□□□ -0.65
U2AF1-205ENST00000463599 SLC10A3P09131 477 aa10.98□□□□□ -0.65
U2AF1-205ENST00000463599 PSEN2P49810 448 aa10.98□□□□□ -0.65
U2AF1-205ENST00000463599 GRIPAP1Q4V328 841 aa10.98□□□□□ -0.65
U2AF1-205ENST00000463599 TBC1D2BQ9UPU7 963 aa10.98□□□□□ -0.65
U2AF1-205ENST00000463599 CALR3Q96L12 384 aaKnown RBP10.97□□□□□ -0.65
U2AF1-205ENST00000463599 MTMR2Q13614 643 aa10.96□□□□□ -0.65
U2AF1-205ENST00000463599 PCDHGC3Q9UN70 934 aa10.96□□□□□ -0.65
U2AF1-205ENST00000463599 NDUFB9Q9Y6M9 179 aa10.96□□□□□ -0.65
U2AF1-205ENST00000463599 ZBTB7CA1YPR0 619 aa10.95□□□□□ -0.66
U2AF1-205ENST00000463599 SLF2Q8IX21 1173 aa10.95□□□□□ -0.66
U2AF1-205ENST00000463599 ERBB3P21860 1342 aa10.94□□□□□ -0.66
U2AF1-205ENST00000463599 FAM98CQ17RN3 349 aaKnown RBP10.94□□□□□ -0.66
U2AF1-205ENST00000463599 HELBQ8NG08 1087 aaPredicted RBP10.94□□□□□ -0.66
U2AF1-205ENST00000463599 SEPT9Q9UHD8 586 aaPredicted RBP10.94□□□□□ -0.66
U2AF1-205ENST00000463599 CTDSPL2Q05D32 466 aa10.93□□□□□ -0.66
U2AF1-205ENST00000463599 GJD4Q96KN9 370 aaPredicted RBP10.93□□□□□ -0.66
U2AF1-205ENST00000463599 GUCA2AQ02747 115 aa10.92□□□□□ -0.66
U2AF1-205ENST00000463599 WASHC4Q2M389 1173 aa10.92□□□□□ -0.66
U2AF1-205ENST00000463599 PPP1R15AO75807 674 aaPredicted RBP10.91□□□□□ -0.66
U2AF1-205ENST00000463599 PBX2P40425 430 aa10.91□□□□□ -0.66
U2AF1-205ENST00000463599 LAPTM4BQ86VI4 370 aa10.91□□□□□ -0.66
U2AF1-205ENST00000463599 GLMNQ92990 594 aa10.91□□□□□ -0.66
U2AF1-205ENST00000463599 TRAIPQ9BWF2 469 aa10.91□□□□□ -0.66
U2AF1-205ENST00000463599 ACIN1Q9UKV3 1341 aaKnown RBP10.9□□□□□ -0.66
U2AF1-205ENST00000463599 POM121CA8CG34 1229 aa10.9□□□□□ -0.66
U2AF1-205ENST00000463599 C6orf229H3BNL8 230 aa10.9□□□□□ -0.66
U2AF1-205ENST00000463599 VARS2Q5ST30 1063 aaKnown RBP10.9□□□□□ -0.66
U2AF1-205ENST00000463599 HLA-CQ95604 372 aa10.9□□□□□ -0.66
U2AF1-205ENST00000463599 OTUD5Q96G74 571 aa10.9□□□□□ -0.66
U2AF1-205ENST00000463599 ATP6V1AP38606 617 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms