RNA–Protein interactions for RNA: ENST00000463455.1

RTCB-202, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-202ENST00000463455 PPARGC1BQ86YN6 1023 aaKnown RBP18.1■□□□□ 0.49
RTCB-202ENST00000463455 E9PCH4 1651 aa18.09■□□□□ 0.49
RTCB-202ENST00000463455 NUP155O75694 1391 aa18.09■□□□□ 0.49
RTCB-202ENST00000463455 ITGAEP38570 1179 aa18.08■□□□□ 0.48
RTCB-202ENST00000463455 TOM1O60784 492 aa18.07■□□□□ 0.48
RTCB-202ENST00000463455 ZBTB22O15209 634 aa18.06■□□□□ 0.48
RTCB-202ENST00000463455 HDGFP51858 240 aaKnown RBP18.06■□□□□ 0.48
RTCB-202ENST00000463455 LRRC7Q96NW7 1537 aa18.06■□□□□ 0.48
RTCB-202ENST00000463455 STRCP1A6NGW2 1772 aa18.06■□□□□ 0.48
RTCB-202ENST00000463455 TMEM131LA2VDJ0 1609 aa18.05■□□□□ 0.48
RTCB-202ENST00000463455 ZFYVE9O95405 1425 aa18.05■□□□□ 0.48
RTCB-202ENST00000463455 NAIPQ13075 1403 aa18.04■□□□□ 0.48
RTCB-202ENST00000463455 HFM1A2PYH4 1435 aa18.02■□□□□ 0.48
RTCB-202ENST00000463455 PLEKHG1Q9ULL1 1385 aa18.02■□□□□ 0.47
RTCB-202ENST00000463455 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.01■□□□□ 0.47
RTCB-202ENST00000463455 RIMS2Q9UQ26 1411 aa18■□□□□ 0.47
RTCB-202ENST00000463455 MYO5BQ9ULV0 1848 aa18■□□□□ 0.47
RTCB-202ENST00000463455 NKTRP30414 1462 aaKnown RBP17.99■□□□□ 0.47
RTCB-202ENST00000463455 SPHKAPQ2M3C7 1700 aa17.98■□□□□ 0.47
RTCB-202ENST00000463455 KCNA6P17658 529 aa17.98■□□□□ 0.47
RTCB-202ENST00000463455 NWD1Q149M9 1564 aa17.98■□□□□ 0.47
RTCB-202ENST00000463455 ALKQ9UM73 1620 aa17.97■□□□□ 0.47
RTCB-202ENST00000463455 PPP1R15AO75807 674 aaPredicted RBP17.96■□□□□ 0.47
RTCB-202ENST00000463455 DIP2AQ14689 1571 aa17.96■□□□□ 0.46
RTCB-202ENST00000463455 SLC26A8Q96RN1 970 aa17.94■□□□□ 0.46
RTCB-202ENST00000463455 XIRP1Q702N8 1843 aaKnown RBP17.93■□□□□ 0.46
RTCB-202ENST00000463455 TRPM2O94759 1503 aa17.93■□□□□ 0.46
RTCB-202ENST00000463455 PIP4K2BP78356 416 aa17.93■□□□□ 0.46
RTCB-202ENST00000463455 TBX22Q9Y458 520 aa17.93■□□□□ 0.46
RTCB-202ENST00000463455 PIK3R4Q99570 1358 aa17.92■□□□□ 0.46
RTCB-202ENST00000463455 CHGAP10645 457 aaKnown RBP17.92■□□□□ 0.46
RTCB-202ENST00000463455 BCANQ96GW7 911 aa17.91■□□□□ 0.46
RTCB-202ENST00000463455 ACIN1Q9UKV3 1341 aaKnown RBP17.91■□□□□ 0.46
RTCB-202ENST00000463455 CHD2O14647 1828 aaKnown RBP17.91■□□□□ 0.46
RTCB-202ENST00000463455 TMEM94Q12767 1356 aa17.91■□□□□ 0.46
RTCB-202ENST00000463455 DISP3Q9P2K9 1392 aa17.9■□□□□ 0.46
RTCB-202ENST00000463455 ADAMTS13Q76LX8 1427 aa17.89■□□□□ 0.46
RTCB-202ENST00000463455 NCOA3Q9Y6Q9 1424 aa17.89■□□□□ 0.46
RTCB-202ENST00000463455 HSPA1LP34931 641 aa17.88■□□□□ 0.45
RTCB-202ENST00000463455 PROSER2Q86WR7 435 aaPredicted RBP17.87■□□□□ 0.45
RTCB-202ENST00000463455 CLTCL1P53675 1640 aa17.87■□□□□ 0.45
RTCB-202ENST00000463455 FAM135BQ49AJ0 1406 aa17.86■□□□□ 0.45
RTCB-202ENST00000463455 SETBP1Q9Y6X0 1596 aa17.86■□□□□ 0.45
RTCB-202ENST00000463455 DCAF8L1A6NGE4 600 aa17.85■□□□□ 0.45
RTCB-202ENST00000463455 TRIM52Q96A61 297 aa17.85■□□□□ 0.45
RTCB-202ENST00000463455 FOXD4L1Q9NU39 408 aa17.85■□□□□ 0.45
RTCB-202ENST00000463455 KIF1BO60333 1816 aa17.84■□□□□ 0.45
RTCB-202ENST00000463455 MSH6P52701 1360 aa17.84■□□□□ 0.45
RTCB-202ENST00000463455 SLC4A2P04920 1241 aa17.83■□□□□ 0.44
RTCB-202ENST00000463455 NEXMIFQ5QGS0 1516 aa17.82■□□□□ 0.44
RTCB-202ENST00000463455 NRXN3Q9Y4C0 1643 aa17.81■□□□□ 0.44
RTCB-202ENST00000463455 ZNF326Q5BKZ1 582 aaKnown RBP17.81■□□□□ 0.44
RTCB-202ENST00000463455 RPGRIP1LQ68CZ1 1315 aa17.79■□□□□ 0.44
RTCB-202ENST00000463455 NUTM2DQ5VT03 806 aaPredicted RBP17.79■□□□□ 0.44
RTCB-202ENST00000463455 MED1Q15648 1581 aaPredicted RBP17.78■□□□□ 0.44
RTCB-202ENST00000463455 XRN1Q8IZH2 1706 aaKnown RBP17.77■□□□□ 0.44
RTCB-202ENST00000463455 DCCP43146 1447 aa17.75■□□□□ 0.43
RTCB-202ENST00000463455 PTPRUQ92729 1446 aa17.75■□□□□ 0.43
RTCB-202ENST00000463455 ROBO1Q9Y6N7 1651 aa17.75■□□□□ 0.43
RTCB-202ENST00000463455 VGFO15240 615 aaPredicted RBP17.75■□□□□ 0.43
RTCB-202ENST00000463455 AMOTL2Q9Y2J4 779 aa17.75■□□□□ 0.43
RTCB-202ENST00000463455 CADPS2Q86UW7 1296 aa17.74■□□□□ 0.43
RTCB-202ENST00000463455 C19orf44Q9H6X5 657 aa17.74■□□□□ 0.43
RTCB-202ENST00000463455 SLAIN2Q9P270 581 aa17.74■□□□□ 0.43
RTCB-202ENST00000463455 CCDC144AA2RUR9 1427 aa17.73■□□□□ 0.43
RTCB-202ENST00000463455 SETD5Q9C0A6 1442 aa17.73■□□□□ 0.43
RTCB-202ENST00000463455 RBM33Q96EV2 1170 aaKnown RBP17.73■□□□□ 0.43
RTCB-202ENST00000463455 MPHOSPH9Q99550 1183 aa17.72■□□□□ 0.43
RTCB-202ENST00000463455 PRAG1Q86YV5 1406 aa17.72■□□□□ 0.43
RTCB-202ENST00000463455 PPLO60437 1756 aa17.71■□□□□ 0.43
RTCB-202ENST00000463455 METP08581 1390 aa17.71■□□□□ 0.43
RTCB-202ENST00000463455 ILDR2Q71H61 639 aa17.71■□□□□ 0.43
RTCB-202ENST00000463455 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.71■□□□□ 0.43
RTCB-202ENST00000463455 C14orf37Q86TY3 774 aa17.7■□□□□ 0.42
RTCB-202ENST00000463455 ATF3P18847 181 aa17.69■□□□□ 0.42
RTCB-202ENST00000463455 PTCH1Q13635 1447 aa17.69■□□□□ 0.42
RTCB-202ENST00000463455 SETD1AO15047 1707 aaKnown RBP17.69■□□□□ 0.42
RTCB-202ENST00000463455 SPATA31E1Q6ZUB1 1445 aa17.68■□□□□ 0.42
RTCB-202ENST00000463455 ANKRD30BQ9BXX2 1392 aa17.67■□□□□ 0.42
RTCB-202ENST00000463455 SOCS7O14512 581 aa17.66■□□□□ 0.42
RTCB-202ENST00000463455 ADGRL3Q9HAR2 1447 aa17.65■□□□□ 0.42
RTCB-202ENST00000463455 AHDC1Q5TGY3 1603 aaPredicted RBP17.65■□□□□ 0.42
RTCB-202ENST00000463455 RAB3GAP2Q9H2M9 1393 aa17.65■□□□□ 0.42
RTCB-202ENST00000463455 PHLPP1O60346 1717 aa17.64■□□□□ 0.41
RTCB-202ENST00000463455 HRCP23327 699 aa17.64■□□□□ 0.41
RTCB-202ENST00000463455 IFT172Q9UG01 1749 aa17.63■□□□□ 0.41
RTCB-202ENST00000463455 JCADQ9P266 1359 aa17.62■□□□□ 0.41
RTCB-202ENST00000463455 COL16A1Q07092 1604 aaPredicted RBP17.61■□□□□ 0.41
RTCB-202ENST00000463455 MST1RQ04912 1400 aa17.6■□□□□ 0.41
RTCB-202ENST00000463455 NALCNQ8IZF0 1738 aa17.59■□□□□ 0.41
RTCB-202ENST00000463455 TECPR2O15040 1411 aa17.58■□□□□ 0.41
RTCB-202ENST00000463455 PIK3C2GO75747 1445 aa17.58■□□□□ 0.41
RTCB-202ENST00000463455 BRINP3Q76B58 766 aa17.58■□□□□ 0.4
RTCB-202ENST00000463455 ASXL1Q8IXJ9 1541 aa17.57■□□□□ 0.4
RTCB-202ENST00000463455 ROBO2Q9HCK4 1378 aa17.57■□□□□ 0.4
RTCB-202ENST00000463455 ADGRF5Q8IZF2 1346 aa17.57■□□□□ 0.4
RTCB-202ENST00000463455 MYOM2P54296 1465 aa17.56■□□□□ 0.4
RTCB-202ENST00000463455 RGL3Q3MIN7 710 aa17.56■□□□□ 0.4
RTCB-202ENST00000463455 NRXN1Q9ULB1 1477 aa17.56■□□□□ 0.4
RTCB-202ENST00000463455 SPATA31A6Q5VVP1 1343 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms