RNA–Protein interactions for RNA: ENST00000463423.5

CTPS1-204, Transcript of CTP synthase 1, humanhuman

TSL 5

Gene CTPS1, Length 457 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-204ENST00000463423 PPLO60437 1756 aa8.91□□□□□ -0.98
CTPS1-204ENST00000463423 IFT172Q9UG01 1749 aa8.91□□□□□ -0.98
CTPS1-204ENST00000463423 CCDC144AA2RUR9 1427 aa8.9□□□□□ -0.98
CTPS1-204ENST00000463423 RPGRIP1LQ68CZ1 1315 aa8.9□□□□□ -0.98
CTPS1-204ENST00000463423 HDGFP51858 240 aaKnown RBP8.9□□□□□ -0.98
CTPS1-204ENST00000463423 STAC3Q96MF2 364 aa8.9□□□□□ -0.98
CTPS1-204ENST00000463423 SPATA31E1Q6ZUB1 1445 aa8.89□□□□□ -0.99
CTPS1-204ENST00000463423 MED14O60244 1454 aa8.89□□□□□ -0.99
CTPS1-204ENST00000463423 TMEM2Q9UHN6 1383 aa8.88□□□□□ -0.99
CTPS1-204ENST00000463423 SCAF1Q9H7N4 1312 aaKnown RBP8.88□□□□□ -0.99
CTPS1-204ENST00000463423 ANKLE2Q86XL3 938 aa8.88□□□□□ -0.99
CTPS1-204ENST00000463423 STAG3Q9UJ98 1225 aa8.88□□□□□ -0.99
CTPS1-204ENST00000463423 ZFYVE9O95405 1425 aa8.88□□□□□ -0.99
CTPS1-204ENST00000463423 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.87□□□□□ -0.99
CTPS1-204ENST00000463423 NEXMIFQ5QGS0 1516 aa8.86□□□□□ -0.99
CTPS1-204ENST00000463423 LTKP29376 864 aa8.86□□□□□ -0.99
CTPS1-204ENST00000463423 EID1Q9Y6B2 187 aa8.86□□□□□ -0.99
CTPS1-204ENST00000463423 VGFO15240 615 aaPredicted RBP8.85□□□□□ -0.99
CTPS1-204ENST00000463423 HSPA2P54652 639 aa8.85□□□□□ -0.99
CTPS1-204ENST00000463423 TXNDC2Q86VQ3 553 aa8.85□□□□□ -0.99
CTPS1-204ENST00000463423 TIMELESSQ9UNS1 1208 aa8.85□□□□□ -0.99
CTPS1-204ENST00000463423 RIMS2Q9UQ26 1411 aa8.85□□□□□ -0.99
CTPS1-204ENST00000463423 IQGAP1P46940 1657 aa8.85□□□□□ -0.99
CTPS1-204ENST00000463423 SCAF11Q99590 1463 aaKnown RBP8.84□□□□□ -0.99
CTPS1-204ENST00000463423 CHD2O14647 1828 aaKnown RBP8.84□□□□□ -0.99
CTPS1-204ENST00000463423 CHGAP10645 457 aaKnown RBP8.83□□□□□ -1
CTPS1-204ENST00000463423 SIN3AQ96ST3 1273 aa8.83□□□□□ -1
CTPS1-204ENST00000463423 PLEKHG1Q9ULL1 1385 aa8.83□□□□□ -1
CTPS1-204ENST00000463423 NRXN1Q9ULB1 1477 aa8.83□□□□□ -1
CTPS1-204ENST00000463423 NCKAP5LQ9HCH0 1330 aa8.82□□□□□ -1
CTPS1-204ENST00000463423 RGL3Q3MIN7 710 aa8.82□□□□□ -1
CTPS1-204ENST00000463423 ZNF326Q5BKZ1 582 aaKnown RBP8.82□□□□□ -1
CTPS1-204ENST00000463423 NRXN3Q9Y4C0 1643 aa8.82□□□□□ -1
CTPS1-204ENST00000463423 SETD1AO15047 1707 aaKnown RBP8.82□□□□□ -1
CTPS1-204ENST00000463423 MYOM2P54296 1465 aa8.82□□□□□ -1
CTPS1-204ENST00000463423 SETBP1Q9Y6X0 1596 aa8.82□□□□□ -1
CTPS1-204ENST00000463423 NPHP4O75161 1426 aaPredicted RBP8.81□□□□□ -1
CTPS1-204ENST00000463423 KIAA1210Q9ULL0 1709 aa8.81□□□□□ -1
CTPS1-204ENST00000463423 TBX22Q9Y458 520 aa8.81□□□□□ -1
CTPS1-204ENST00000463423 DIP2AQ14689 1571 aa8.81□□□□□ -1
CTPS1-204ENST00000463423 LAMC1P11047 1609 aa8.8□□□□□ -1
CTPS1-204ENST00000463423 PIK3R4Q99570 1358 aa8.79□□□□□ -1
CTPS1-204ENST00000463423 CCER1Q8TC90 406 aaPredicted RBP8.79□□□□□ -1
CTPS1-204ENST00000463423 DCAF11Q8TEB1 546 aa8.79□□□□□ -1
CTPS1-204ENST00000463423 L3MBTL2Q969R5 705 aa8.79□□□□□ -1
CTPS1-204ENST00000463423 ADAMTS13Q76LX8 1427 aa8.79□□□□□ -1
CTPS1-204ENST00000463423 NEUROD1Q13562 356 aa8.78□□□□□ -1
CTPS1-204ENST00000463423 C14orf93Q9H972 538 aaKnown RBP8.78□□□□□ -1
CTPS1-204ENST00000463423 ALKQ9UM73 1620 aa8.78□□□□□ -1
CTPS1-204ENST00000463423 STRCP1A6NGW2 1772 aa8.78□□□□□ -1
CTPS1-204ENST00000463423 PIK3C2GO75747 1445 aa8.78□□□□□ -1
CTPS1-204ENST00000463423 ADGRF5Q8IZF2 1346 aa8.78□□□□□ -1
CTPS1-204ENST00000463423 PPP1R15AO75807 674 aaPredicted RBP8.77□□□□□ -1.01
CTPS1-204ENST00000463423 C1QBPQ07021 282 aaKnown RBP8.77□□□□□ -1.01
CTPS1-204ENST00000463423 NUTM2DQ5VT03 806 aaPredicted RBP8.76□□□□□ -1.01
CTPS1-204ENST00000463423 TONSLQ96HA7 1378 aa8.75□□□□□ -1.01
CTPS1-204ENST00000463423 PRAG1Q86YV5 1406 aa8.75□□□□□ -1.01
CTPS1-204ENST00000463423 KCNA6P17658 529 aa8.75□□□□□ -1.01
CTPS1-204ENST00000463423 KDM2AQ9Y2K7 1162 aa8.75□□□□□ -1.01
CTPS1-204ENST00000463423 TRPM1Q7Z4N2 1603 aa8.75□□□□□ -1.01
CTPS1-204ENST00000463423 XIRP1Q702N8 1843 aaKnown RBP8.75□□□□□ -1.01
CTPS1-204ENST00000463423 KNDC1Q76NI1 1749 aa8.74□□□□□ -1.01
CTPS1-204ENST00000463423 NWD1Q149M9 1564 aa8.74□□□□□ -1.01
CTPS1-204ENST00000463423 LTBP4Q8N2S1 1624 aa8.74□□□□□ -1.01
CTPS1-204ENST00000463423 SIRT1Q96EB6 747 aa8.74□□□□□ -1.01
CTPS1-204ENST00000463423 SLC26A8Q96RN1 970 aa8.74□□□□□ -1.01
CTPS1-204ENST00000463423 XRN1Q8IZH2 1706 aaKnown RBP8.74□□□□□ -1.01
CTPS1-204ENST00000463423 CPS1P31327 1500 aa8.73□□□□□ -1.01
CTPS1-204ENST00000463423 ADGRB1O14514 1584 aa8.73□□□□□ -1.01
CTPS1-204ENST00000463423 METP08581 1390 aa8.73□□□□□ -1.01
CTPS1-204ENST00000463423 NCOA3Q9Y6Q9 1424 aa8.72□□□□□ -1.01
CTPS1-204ENST00000463423 CFAP70Q5T0N1 1121 aa8.72□□□□□ -1.01
CTPS1-204ENST00000463423 BCANQ96GW7 911 aa8.72□□□□□ -1.01
CTPS1-204ENST00000463423 ABCC11Q96J66 1382 aa8.72□□□□□ -1.01
CTPS1-204ENST00000463423 TECPR2O15040 1411 aa8.71□□□□□ -1.01
CTPS1-204ENST00000463423 PTPRUQ92729 1446 aa8.71□□□□□ -1.01
CTPS1-204ENST00000463423 NKTRP30414 1462 aaKnown RBP8.71□□□□□ -1.01
CTPS1-204ENST00000463423 NBPF8Q3BBV2 869 aa8.71□□□□□ -1.02
CTPS1-204ENST00000463423 AMOTL2Q9Y2J4 779 aa8.71□□□□□ -1.02
CTPS1-204ENST00000463423 IQSEC2Q5JU85 1478 aa8.7□□□□□ -1.02
CTPS1-204ENST00000463423 ASXL1Q8IXJ9 1541 aa8.7□□□□□ -1.02
CTPS1-204ENST00000463423 ZNF335Q9H4Z2 1342 aaPredicted RBP8.7□□□□□ -1.02
CTPS1-204ENST00000463423 LRPPRCP42704 1394 aaKnown RBP8.7□□□□□ -1.02
CTPS1-204ENST00000463423 GPRASP1Q5JY77 1395 aa8.7□□□□□ -1.02
CTPS1-204ENST00000463423 YTHDC2Q9H6S0 1430 aaKnown RBP8.7□□□□□ -1.02
CTPS1-204ENST00000463423 DLC1Q96QB1 1528 aa8.7□□□□□ -1.02
CTPS1-204ENST00000463423 FAM135BQ49AJ0 1406 aa8.69□□□□□ -1.02
CTPS1-204ENST00000463423 ARHGEF28Q8N1W1 1705 aaKnown RBP8.68□□□□□ -1.02
CTPS1-204ENST00000463423 NBPF1Q3BBV0 1214 aa8.68□□□□□ -1.02
CTPS1-204ENST00000463423 TMEM132EQ6IEE7 984 aa8.68□□□□□ -1.02
CTPS1-204ENST00000463423 PTCH1Q13635 1447 aa8.68□□□□□ -1.02
CTPS1-204ENST00000463423 RALGAPBQ86X10 1494 aa8.68□□□□□ -1.02
CTPS1-204ENST00000463423 LRRC7Q96NW7 1537 aa8.68□□□□□ -1.02
CTPS1-204ENST00000463423 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.66□□□□□ -1.02
CTPS1-204ENST00000463423 PROSER2Q86WR7 435 aaPredicted RBP8.66□□□□□ -1.02
CTPS1-204ENST00000463423 CERKQ8TCT0 537 aa8.65□□□□□ -1.02
CTPS1-204ENST00000463423 ROCK2O75116 1388 aaKnown RBP8.64□□□□□ -1.03
CTPS1-204ENST00000463423 ROBO2Q9HCK4 1378 aa8.64□□□□□ -1.03
CTPS1-204ENST00000463423 NALCNQ8IZF0 1738 aa8.64□□□□□ -1.03
CTPS1-204ENST00000463423 SLC24A1O60721 1099 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms