RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 NUTM1Q86Y26 1132 aa9.93□□□□□ -0.82
COPS3-205ENST00000463097 RCCD1A6NED2 376 aa9.92□□□□□ -0.82
COPS3-205ENST00000463097 GABBR2O75899 941 aa9.92□□□□□ -0.82
COPS3-205ENST00000463097 IRF5Q13568 498 aa9.92□□□□□ -0.82
COPS3-205ENST00000463097 ADAM33Q9BZ11 813 aa9.92□□□□□ -0.82
COPS3-205ENST00000463097 CSPP1Q1MSJ5 1256 aa9.91□□□□□ -0.82
COPS3-205ENST00000463097 SULF1Q8IWU6 871 aa9.91□□□□□ -0.82
COPS3-205ENST00000463097 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.91□□□□□ -0.82
COPS3-205ENST00000463097 POM121CA8CG34 1229 aa9.9□□□□□ -0.82
COPS3-205ENST00000463097 LILRB3O75022 631 aa9.9□□□□□ -0.82
COPS3-205ENST00000463097 AP1G2O75843 785 aa9.9□□□□□ -0.82
COPS3-205ENST00000463097 GJA5P36382 358 aa9.9□□□□□ -0.82
COPS3-205ENST00000463097 PDE4CQ08493 712 aa9.9□□□□□ -0.82
COPS3-205ENST00000463097 GLMNQ92990 594 aa9.9□□□□□ -0.82
COPS3-205ENST00000463097 EYA1Q99502 592 aa9.9□□□□□ -0.82
COPS3-205ENST00000463097 METRNQ9UJH8 293 aa9.9□□□□□ -0.82
COPS3-205ENST00000463097 TBC1D2BQ9UPU7 963 aa9.9□□□□□ -0.82
COPS3-205ENST00000463097 MOXD2PA6NHM9 499 aa9.89□□□□□ -0.83
COPS3-205ENST00000463097 QPCTQ16769 361 aa9.89□□□□□ -0.83
COPS3-205ENST00000463097 ZNF710Q8N1W2 664 aa9.88□□□□□ -0.83
COPS3-205ENST00000463097 FAM198AQ9UFP1 575 aa9.88□□□□□ -0.83
COPS3-205ENST00000463097 DDX11L8A8MPP1 907 aa9.87□□□□□ -0.83
COPS3-205ENST00000463097 NDUFV2P19404 249 aa9.87□□□□□ -0.83
COPS3-205ENST00000463097 RTL5Q5HYW3 569 aaPredicted RBP9.87□□□□□ -0.83
COPS3-205ENST00000463097 GZF1Q9H116 711 aaPredicted RBP9.87□□□□□ -0.83
COPS3-205ENST00000463097 PCDHB15Q9Y5E8 787 aa9.87□□□□□ -0.83
COPS3-205ENST00000463097 TMCO4Q5TGY1 634 aa9.86□□□□□ -0.83
COPS3-205ENST00000463097 NUTM2BA6NNL0 878 aaPredicted RBP9.85□□□□□ -0.83
COPS3-205ENST00000463097 NUTM2EB1AL46 878 aaPredicted RBP9.85□□□□□ -0.83
COPS3-205ENST00000463097 NUDT7P0C024 238 aa9.85□□□□□ -0.83
COPS3-205ENST00000463097 NUTM2DQ5VT03 806 aaPredicted RBP9.85□□□□□ -0.83
COPS3-205ENST00000463097 NUTM2AQ8IVF1 878 aaPredicted RBP9.85□□□□□ -0.83
COPS3-205ENST00000463097 USP17L8P0C7I0 530 aa9.84□□□□□ -0.83
COPS3-205ENST00000463097 DNAJB2P25686 324 aa9.84□□□□□ -0.83
COPS3-205ENST00000463097 RGS22Q8NE09 1264 aa9.84□□□□□ -0.83
COPS3-205ENST00000463097 COL9A1P20849 921 aa9.83□□□□□ -0.84
COPS3-205ENST00000463097 PRPF38BQ5VTL8 546 aaKnown RBP9.83□□□□□ -0.84
COPS3-205ENST00000463097 NUDT18Q6ZVK8 323 aa9.83□□□□□ -0.84
COPS3-205ENST00000463097 HDGFL1Q5TGJ6 251 aa9.82□□□□□ -0.84
COPS3-205ENST00000463097 CABLES1Q8TDN4 633 aa9.82□□□□□ -0.84
COPS3-205ENST00000463097 KHSRPQ92945 711 aaKnown RBP eCLIP9.82□□□□□ -0.84
COPS3-205ENST00000463097 PBXIP1Q96AQ6 731 aa9.82□□□□□ -0.84
COPS3-205ENST00000463097 TSKSQ9UJT2 592 aa9.82□□□□□ -0.84
COPS3-205ENST00000463097 NDUFB9Q9Y6M9 179 aa9.82□□□□□ -0.84
COPS3-205ENST00000463097 ARSIQ5FYB1 569 aa9.81□□□□□ -0.84
COPS3-205ENST00000463097 GJD4Q96KN9 370 aaPredicted RBP9.81□□□□□ -0.84
COPS3-205ENST00000463097 TMEM134Q9H6X4 195 aa9.81□□□□□ -0.84
COPS3-205ENST00000463097 PATL2C9JE40 543 aaKnown RBP9.8□□□□□ -0.84
COPS3-205ENST00000463097 MFAP1P55081 439 aaKnown RBP9.8□□□□□ -0.84
COPS3-205ENST00000463097 NBPF26B4DH59 902 aa9.79□□□□□ -0.84
COPS3-205ENST00000463097 C3orf80F5H4A9 247 aa9.79□□□□□ -0.84
COPS3-205ENST00000463097 KDM4AO75164 1064 aa9.79□□□□□ -0.84
COPS3-205ENST00000463097 WASHC4Q2M389 1173 aa9.79□□□□□ -0.84
COPS3-205ENST00000463097 TATDN2Q93075 761 aa9.79□□□□□ -0.84
COPS3-205ENST00000463097 ZBTB3Q9H5J0 574 aa9.79□□□□□ -0.84
COPS3-205ENST00000463097 PNMA3Q9UL41 463 aa9.79□□□□□ -0.84
COPS3-205ENST00000463097 MTMR7Q9Y216 660 aa9.79□□□□□ -0.84
COPS3-205ENST00000463097 RDH13Q8NBN7 331 aa9.78□□□□□ -0.84
COPS3-205ENST00000463097 ADAMTS19Q8TE59 1207 aa9.78□□□□□ -0.84
COPS3-205ENST00000463097 PPP1R3GB7ZBB8 358 aa9.77□□□□□ -0.85
COPS3-205ENST00000463097 RFX1P22670 979 aa9.77□□□□□ -0.85
COPS3-205ENST00000463097 USP46P62068 366 aa9.77□□□□□ -0.85
COPS3-205ENST00000463097 DOK7Q18PE1 504 aa9.77□□□□□ -0.85
COPS3-205ENST00000463097 BCL2L12Q9HB09 334 aa9.77□□□□□ -0.85
COPS3-205ENST00000463097 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.76□□□□□ -0.85
COPS3-205ENST00000463097 PPP4R3BQ5MIZ7 849 aa9.76□□□□□ -0.85
COPS3-205ENST00000463097 CFAP70Q5T0N1 1121 aa9.76□□□□□ -0.85
COPS3-205ENST00000463097 PACS2Q86VP3 889 aa9.76□□□□□ -0.85
COPS3-205ENST00000463097 ZSWIM6Q9HCJ5 1215 aa9.76□□□□□ -0.85
COPS3-205ENST00000463097 USTQ9Y2C2 406 aa9.76□□□□□ -0.85
COPS3-205ENST00000463097 TRIM6-TRIM34B2RNG4 842 aa9.75□□□□□ -0.85
COPS3-205ENST00000463097 BRD1O95696 1058 aa9.75□□□□□ -0.85
COPS3-205ENST00000463097 CSB-PGBD3P0DP91 1061 aa9.75□□□□□ -0.85
COPS3-205ENST00000463097 FDX1P10109 184 aa9.75□□□□□ -0.85
COPS3-205ENST00000463097 SRPK2P78362 688 aaKnown RBP9.75□□□□□ -0.85
COPS3-205ENST00000463097 KCNA1Q09470 495 aa9.75□□□□□ -0.85
COPS3-205ENST00000463097 GPR153Q6NV75 609 aa9.75□□□□□ -0.85
COPS3-205ENST00000463097 RIMBP2O15034 1052 aa9.74□□□□□ -0.85
COPS3-205ENST00000463097 HOXA2O43364 376 aa9.74□□□□□ -0.85
COPS3-205ENST00000463097 PTPREP23469 700 aa9.74□□□□□ -0.85
COPS3-205ENST00000463097 GCGRP47871 477 aa9.74□□□□□ -0.85
COPS3-205ENST00000463097 CTDSPL2Q05D32 466 aa9.74□□□□□ -0.85
COPS3-205ENST00000463097 PPP1R12CQ9BZL4 782 aa9.74□□□□□ -0.85
COPS3-205ENST00000463097 LHX6Q9UPM6 363 aa9.74□□□□□ -0.85
COPS3-205ENST00000463097 PSDA5PKW4 1024 aaPredicted RBP9.73□□□□□ -0.85
COPS3-205ENST00000463097 HOXB3P14651 431 aaPredicted RBP9.73□□□□□ -0.85
COPS3-205ENST00000463097 RSPH4AQ5TD94 716 aa9.73□□□□□ -0.85
COPS3-205ENST00000463097 TRIM34Q9BYJ4 488 aa9.73□□□□□ -0.85
COPS3-205ENST00000463097 HMX1Q9NP08 348 aaPredicted RBP9.73□□□□□ -0.85
COPS3-205ENST00000463097 POTEIP0CG38 1075 aa9.72□□□□□ -0.85
COPS3-205ENST00000463097 VAC14Q08AM6 782 aa9.72□□□□□ -0.85
COPS3-205ENST00000463097 PCDHGC3Q9UN70 934 aa9.72□□□□□ -0.85
COPS3-205ENST00000463097 SMAPO00193 183 aa9.71□□□□□ -0.86
COPS3-205ENST00000463097 GPR37L1O60883 481 aa9.71□□□□□ -0.86
COPS3-205ENST00000463097 ALG2Q9H553 416 aa9.71□□□□□ -0.86
COPS3-205ENST00000463097 FOXD4L5Q5VV16 416 aaPredicted RBP9.7□□□□□ -0.86
COPS3-205ENST00000463097 HELBQ8NG08 1087 aaPredicted RBP9.7□□□□□ -0.86
COPS3-205ENST00000463097 FOXD4L4Q8WXT5 416 aaPredicted RBP9.7□□□□□ -0.86
COPS3-205ENST00000463097 PALM3A6NDB9 673 aaPredicted RBP9.69□□□□□ -0.86
COPS3-205ENST00000463097 MTMR2Q13614 643 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 151.2 ms