RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 ZFYVE9O95405 1425 aa20.62■□□□□ 0.89
COL6A1-202ENST00000463060 PPLO60437 1756 aa20.62■□□□□ 0.89
COL6A1-202ENST00000463060 ZNF142P52746 1687 aaPredicted RBP20.62■□□□□ 0.89
COL6A1-202ENST00000463060 ZNF326Q5BKZ1 582 aaKnown RBP20.62■□□□□ 0.89
COL6A1-202ENST00000463060 STAG3Q9UJ98 1225 aa20.62■□□□□ 0.89
COL6A1-202ENST00000463060 KDM2AQ9Y2K7 1162 aa20.61■□□□□ 0.89
COL6A1-202ENST00000463060 MYOM2P54296 1465 aa20.61■□□□□ 0.89
COL6A1-202ENST00000463060 NRXN1Q9ULB1 1477 aa20.61■□□□□ 0.89
COL6A1-202ENST00000463060 THEMISQ8N1K5 641 aaPredicted RBP20.6■□□□□ 0.89
COL6A1-202ENST00000463060 ARHGAP23Q9P227 1491 aa20.6■□□□□ 0.89
COL6A1-202ENST00000463060 TMEM2Q9UHN6 1383 aa20.59■□□□□ 0.89
COL6A1-202ENST00000463060 PRAG1Q86YV5 1406 aa20.59■□□□□ 0.89
COL6A1-202ENST00000463060 SLIT1O75093 1534 aa20.58■□□□□ 0.89
COL6A1-202ENST00000463060 ADGRF5Q8IZF2 1346 aa20.58■□□□□ 0.89
COL6A1-202ENST00000463060 RIMS2Q9UQ26 1411 aa20.58■□□□□ 0.88
COL6A1-202ENST00000463060 VGFO15240 615 aaPredicted RBP20.57■□□□□ 0.88
COL6A1-202ENST00000463060 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.55■□□□□ 0.88
COL6A1-202ENST00000463060 LTKP29376 864 aa20.53■□□□□ 0.88
COL6A1-202ENST00000463060 HDGFP51858 240 aaKnown RBP20.52■□□□□ 0.88
COL6A1-202ENST00000463060 NUTM2DQ5VT03 806 aaPredicted RBP20.52■□□□□ 0.88
COL6A1-202ENST00000463060 PIK3C2GO75747 1445 aa20.52■□□□□ 0.87
COL6A1-202ENST00000463060 TXNDC2Q86VQ3 553 aa20.49■□□□□ 0.87
COL6A1-202ENST00000463060 C14orf93Q9H972 538 aaKnown RBP20.49■□□□□ 0.87
COL6A1-202ENST00000463060 RALGAPBQ86X10 1494 aa20.49■□□□□ 0.87
COL6A1-202ENST00000463060 TRPM1Q7Z4N2 1603 aa20.49■□□□□ 0.87
COL6A1-202ENST00000463060 KIAA1210Q9ULL0 1709 aa20.48■□□□□ 0.87
COL6A1-202ENST00000463060 LMTK3Q96Q04 1460 aa20.48■□□□□ 0.87
COL6A1-202ENST00000463060 EID1Q9Y6B2 187 aa20.47■□□□□ 0.87
COL6A1-202ENST00000463060 GPRASP1Q5JY77 1395 aa20.46■□□□□ 0.87
COL6A1-202ENST00000463060 PLEKHG1Q9ULL1 1385 aa20.46■□□□□ 0.87
COL6A1-202ENST00000463060 NBPF1Q3BBV0 1214 aa20.46■□□□□ 0.87
COL6A1-202ENST00000463060 CFAP70Q5T0N1 1121 aa20.46■□□□□ 0.87
COL6A1-202ENST00000463060 SCAF11Q99590 1463 aaKnown RBP20.45■□□□□ 0.86
COL6A1-202ENST00000463060 SETBP1Q9Y6X0 1596 aa20.44■□□□□ 0.86
COL6A1-202ENST00000463060 ANKLE2Q86XL3 938 aa20.44■□□□□ 0.86
COL6A1-202ENST00000463060 NRXN3Q9Y4C0 1643 aa20.44■□□□□ 0.86
COL6A1-202ENST00000463060 MED14O60244 1454 aa20.43■□□□□ 0.86
COL6A1-202ENST00000463060 ALKQ9UM73 1620 aa20.42■□□□□ 0.86
COL6A1-202ENST00000463060 ADAMTS13Q76LX8 1427 aa20.41■□□□□ 0.86
COL6A1-202ENST00000463060 ADGRB1O14514 1584 aa20.41■□□□□ 0.86
COL6A1-202ENST00000463060 LAMC1P11047 1609 aa20.4■□□□□ 0.86
COL6A1-202ENST00000463060 SETD1AO15047 1707 aaKnown RBP20.39■□□□□ 0.86
COL6A1-202ENST00000463060 ROCK2O75116 1388 aaKnown RBP20.39■□□□□ 0.85
COL6A1-202ENST00000463060 HSPA2P54652 639 aa20.39■□□□□ 0.85
COL6A1-202ENST00000463060 IQGAP1P46940 1657 aa20.38■□□□□ 0.85
COL6A1-202ENST00000463060 ASXL1Q8IXJ9 1541 aa20.37■□□□□ 0.85
COL6A1-202ENST00000463060 NCKAP5LQ9HCH0 1330 aa20.37■□□□□ 0.85
COL6A1-202ENST00000463060 TBX22Q9Y458 520 aa20.37■□□□□ 0.85
COL6A1-202ENST00000463060 CARD11Q9BXL7 1154 aa20.36■□□□□ 0.85
COL6A1-202ENST00000463060 POLR1AO95602 1720 aaPredicted RBP20.36■□□□□ 0.85
COL6A1-202ENST00000463060 SENP3Q9H4L4 574 aaPredicted RBP20.35■□□□□ 0.85
COL6A1-202ENST00000463060 TMEM132EQ6IEE7 984 aa20.34■□□□□ 0.85
COL6A1-202ENST00000463060 NPHP4O75161 1426 aaPredicted RBP20.34■□□□□ 0.85
COL6A1-202ENST00000463060 METP08581 1390 aa20.34■□□□□ 0.85
COL6A1-202ENST00000463060 SLC26A8Q96RN1 970 aa20.33■□□□□ 0.85
COL6A1-202ENST00000463060 STRCQ7RTU9 1775 aa20.32■□□□□ 0.84
COL6A1-202ENST00000463060 DIP2AQ14689 1571 aa20.32■□□□□ 0.84
COL6A1-202ENST00000463060 EIF4G2P78344 907 aaKnown RBP eCLIP20.31■□□□□ 0.84
COL6A1-202ENST00000463060 HSPA5P11021 654 aaKnown RBP20.3■□□□□ 0.84
COL6A1-202ENST00000463060 BCANQ96GW7 911 aa20.3■□□□□ 0.84
COL6A1-202ENST00000463060 YTHDC2Q9H6S0 1430 aaKnown RBP20.29■□□□□ 0.84
COL6A1-202ENST00000463060 LRPPRCP42704 1394 aaKnown RBP20.29■□□□□ 0.84
COL6A1-202ENST00000463060 USP47Q96K76 1375 aa20.29■□□□□ 0.84
COL6A1-202ENST00000463060 ABCC11Q96J66 1382 aa20.28■□□□□ 0.84
COL6A1-202ENST00000463060 PIK3R4Q99570 1358 aa20.28■□□□□ 0.84
COL6A1-202ENST00000463060 PTPRUQ92729 1446 aa20.27■□□□□ 0.84
COL6A1-202ENST00000463060 TECPR2O15040 1411 aa20.26■□□□□ 0.83
COL6A1-202ENST00000463060 SIRT1Q96EB6 747 aa20.25■□□□□ 0.83
COL6A1-202ENST00000463060 TRAK1Q9UPV9 953 aa20.25■□□□□ 0.83
COL6A1-202ENST00000463060 ST20-MTHFSA0A0A6YYL1 179 aa20.24■□□□□ 0.83
COL6A1-202ENST00000463060 DLC1Q96QB1 1528 aa20.23■□□□□ 0.83
COL6A1-202ENST00000463060 TESK2Q96S53 571 aa20.22■□□□□ 0.83
COL6A1-202ENST00000463060 HIRIP3Q9BW71 556 aaPredicted RBP20.22■□□□□ 0.83
COL6A1-202ENST00000463060 STK26Q9P289 416 aa20.22■□□□□ 0.83
COL6A1-202ENST00000463060 CHD2O14647 1828 aaKnown RBP20.21■□□□□ 0.83
COL6A1-202ENST00000463060 KNDC1Q76NI1 1749 aa20.21■□□□□ 0.83
COL6A1-202ENST00000463060 ARHGEF28Q8N1W1 1705 aaKnown RBP20.21■□□□□ 0.83
COL6A1-202ENST00000463060 XRN1Q8IZH2 1706 aaKnown RBP20.2■□□□□ 0.82
COL6A1-202ENST00000463060 AMOTL2Q9Y2J4 779 aa20.2■□□□□ 0.82
COL6A1-202ENST00000463060 FAM135BQ49AJ0 1406 aa20.19■□□□□ 0.82
COL6A1-202ENST00000463060 CPS1P31327 1500 aa20.19■□□□□ 0.82
COL6A1-202ENST00000463060 ZNF316A6NFI3 1004 aaPredicted RBP20.19■□□□□ 0.82
COL6A1-202ENST00000463060 EIF3AQ14152 1382 aaKnown RBP20.19■□□□□ 0.82
COL6A1-202ENST00000463060 KCNA6P17658 529 aa20.18■□□□□ 0.82
COL6A1-202ENST00000463060 ROBO2Q9HCK4 1378 aa20.18■□□□□ 0.82
COL6A1-202ENST00000463060 SBNO2Q9Y2G9 1366 aa20.18■□□□□ 0.82
COL6A1-202ENST00000463060 CENPJQ9HC77 1338 aaPredicted RBP20.17■□□□□ 0.82
COL6A1-202ENST00000463060 FBXO41Q8TF61 875 aa20.16■□□□□ 0.82
COL6A1-202ENST00000463060 DMRT2Q9Y5R5 561 aa20.16■□□□□ 0.82
COL6A1-202ENST00000463060 C11orf95C9JLR9 678 aaPredicted RBP20.15■□□□□ 0.82
COL6A1-202ENST00000463060 WAPLQ7Z5K2 1190 aa20.15■□□□□ 0.82
COL6A1-202ENST00000463060 PRAM1Q96QH2 718 aa20.15■□□□□ 0.82
COL6A1-202ENST00000463060 PTCH1Q13635 1447 aa20.15■□□□□ 0.82
COL6A1-202ENST00000463060 NWD1Q149M9 1564 aa20.15■□□□□ 0.82
COL6A1-202ENST00000463060 PLEKHH1Q9ULM0 1364 aa20.14■□□□□ 0.81
COL6A1-202ENST00000463060 QRICH2Q9H0J4 1663 aa20.11■□□□□ 0.81
COL6A1-202ENST00000463060 SLC24A1O60721 1099 aa20.11■□□□□ 0.81
COL6A1-202ENST00000463060 POGKQ9P215 609 aa20.11■□□□□ 0.81
COL6A1-202ENST00000463060 STRCP1A6NGW2 1772 aa20.11■□□□□ 0.81
COL6A1-202ENST00000463060 WASHC2AQ641Q2 1341 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms