RNA–Protein interactions for RNA: ENST00000462996.1

PTPN18-208, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-208ENST00000462996 LOC105371045A0A1W2PR82 267 aa31.76■■■□□ 2.67
PTPN18-208ENST00000462996 CHIC2Q9UKJ5 165 aa31.76■■■□□ 2.67
PTPN18-208ENST00000462996 SLC52A1Q9NWF4 448 aa31.74■■■□□ 2.67
PTPN18-208ENST00000462996 CHD2O14647 1828 aaKnown RBP31.72■■■□□ 2.67
PTPN18-208ENST00000462996 ANKRD30AQ9BXX3 1397 aa31.72■■■□□ 2.67
PTPN18-208ENST00000462996 COL16A1Q07092 1604 aaPredicted RBP31.71■■■□□ 2.67
PTPN18-208ENST00000462996 ZFYVE9O95405 1425 aa31.69■■■□□ 2.66
PTPN18-208ENST00000462996 MYO5BQ9ULV0 1848 aa31.68■■■□□ 2.66
PTPN18-208ENST00000462996 PLEKHG1Q9ULL1 1385 aa31.68■■■□□ 2.66
PTPN18-208ENST00000462996 LRP6O75581 1613 aa31.67■■■□□ 2.66
PTPN18-208ENST00000462996 FGD6Q6ZV73 1430 aa31.66■■■□□ 2.66
PTPN18-208ENST00000462996 UPF1Q92900 1129 aaKnown RBP eCLIP31.63■■■□□ 2.65
PTPN18-208ENST00000462996 SPATA31A6Q5VVP1 1343 aa31.62■■■□□ 2.65
PTPN18-208ENST00000462996 RIMS2Q9UQ26 1411 aa31.62■■■□□ 2.65
PTPN18-208ENST00000462996 PPP1R15AO75807 674 aaPredicted RBP31.6■■■□□ 2.65
PTPN18-208ENST00000462996 TBX22Q9Y458 520 aa31.6■■■□□ 2.65
PTPN18-208ENST00000462996 RPRD2Q5VT52 1461 aaKnown RBP31.59■■■□□ 2.65
PTPN18-208ENST00000462996 NCOA3Q9Y6Q9 1424 aa31.59■■■□□ 2.65
PTPN18-208ENST00000462996 GCC2Q8IWJ2 1684 aa31.59■■■□□ 2.65
PTPN18-208ENST00000462996 MEX3CQ5U5Q3 659 aaKnown RBP31.58■■■□□ 2.65
PTPN18-208ENST00000462996 ZNF772Q68DY9 489 aaPredicted RBP31.58■■■□□ 2.65
PTPN18-208ENST00000462996 TRIM52Q96A61 297 aa31.58■■■□□ 2.65
PTPN18-208ENST00000462996 TMEM131LA2VDJ0 1609 aa31.57■■■□□ 2.64
PTPN18-208ENST00000462996 HDGFP51858 240 aaKnown RBP31.57■■■□□ 2.64
PTPN18-208ENST00000462996 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.55■■■□□ 2.64
PTPN18-208ENST00000462996 ADGRL2O95490 1459 aa31.55■■■□□ 2.64
PTPN18-208ENST00000462996 C14orf37Q86TY3 774 aa31.55■■■□□ 2.64
PTPN18-208ENST00000462996 AHDC1Q5TGY3 1603 aaPredicted RBP31.54■■■□□ 2.64
PTPN18-208ENST00000462996 SHPRHQ149N8 1683 aa31.53■■■□□ 2.64
PTPN18-208ENST00000462996 ADAMTS13Q76LX8 1427 aa31.52■■■□□ 2.64
PTPN18-208ENST00000462996 APLP2Q06481 763 aa31.52■■■□□ 2.64
PTPN18-208ENST00000462996 CADPS2Q86UW7 1296 aa31.52■■■□□ 2.64
PTPN18-208ENST00000462996 C19orf44Q9H6X5 657 aa31.52■■■□□ 2.64
PTPN18-208ENST00000462996 NUTM2DQ5VT03 806 aaPredicted RBP31.5■■■□□ 2.63
PTPN18-208ENST00000462996 ANKRD50Q9ULJ7 1429 aa31.49■■■□□ 2.63
PTPN18-208ENST00000462996 ATF3P18847 181 aa31.49■■■□□ 2.63
PTPN18-208ENST00000462996 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.49■■■□□ 2.63
PTPN18-208ENST00000462996 CHGAP10645 457 aaKnown RBP31.47■■■□□ 2.63
PTPN18-208ENST00000462996 RXRBP28702 533 aa31.47■■■□□ 2.63
PTPN18-208ENST00000462996 DIP2AQ14689 1571 aa31.44■■■□□ 2.62
PTPN18-208ENST00000462996 BRINP3Q76B58 766 aa31.44■■■□□ 2.62
PTPN18-208ENST00000462996 PIK3R4Q99570 1358 aa31.43■■■□□ 2.62
PTPN18-208ENST00000462996 NUTM2BA6NNL0 878 aaPredicted RBP31.42■■■□□ 2.62
PTPN18-208ENST00000462996 NUTM2EB1AL46 878 aaPredicted RBP31.42■■■□□ 2.62
PTPN18-208ENST00000462996 NUTM2AQ8IVF1 878 aaPredicted RBP31.42■■■□□ 2.62
PTPN18-208ENST00000462996 PTPRUQ92729 1446 aa31.4■■■□□ 2.62
PTPN18-208ENST00000462996 FAM50AQ14320 339 aaKnown RBP31.39■■■□□ 2.62
PTPN18-208ENST00000462996 AMOTL2Q9Y2J4 779 aa31.39■■■□□ 2.62
PTPN18-208ENST00000462996 CDK12Q9NYV4 1490 aaPredicted RBP31.38■■■□□ 2.61
PTPN18-208ENST00000462996 E9PCH4 1651 aa31.37■■■□□ 2.61
PTPN18-208ENST00000462996 AFF2P51816 1311 aa31.36■■■□□ 2.61
PTPN18-208ENST00000462996 UNC13BO14795 1591 aa31.34■■■□□ 2.61
PTPN18-208ENST00000462996 TRPM2O94759 1503 aa31.34■■■□□ 2.61
PTPN18-208ENST00000462996 SRCAPQ6ZRS2 3230 aa31.34■■■□□ 2.61
PTPN18-208ENST00000462996 ASXL1Q8IXJ9 1541 aa31.32■■■□□ 2.6
PTPN18-208ENST00000462996 SETD5Q9C0A6 1442 aa31.32■■■□□ 2.6
PTPN18-208ENST00000462996 DCCP43146 1447 aa31.31■■■□□ 2.6
PTPN18-208ENST00000462996 MST1RQ04912 1400 aa31.27■■■□□ 2.6
PTPN18-208ENST00000462996 NHSL1Q5SYE7 1610 aa31.27■■■□□ 2.6
PTPN18-208ENST00000462996 XRN1Q8IZH2 1706 aaKnown RBP31.25■■■□□ 2.59
PTPN18-208ENST00000462996 NRXN3Q9Y4C0 1643 aa31.24■■■□□ 2.59
PTPN18-208ENST00000462996 LRRC59Q96AG4 307 aaKnown RBP31.24■■■□□ 2.59
PTPN18-208ENST00000462996 QTRT2Q9H974 415 aaKnown RBP31.24■■■□□ 2.59
PTPN18-208ENST00000462996 RGS12O14924 1447 aa31.24■■■□□ 2.59
PTPN18-208ENST00000462996 DDX17Q92841 729 aaKnown RBP31.23■■■□□ 2.59
PTPN18-208ENST00000462996 C8orf37Q96NL8 207 aa31.23■■■□□ 2.59
PTPN18-208ENST00000462996 IQGAP3Q86VI3 1631 aa31.23■■■□□ 2.59
PTPN18-208ENST00000462996 RBM6P78332 1123 aaKnown RBP31.2■■■□□ 2.59
PTPN18-208ENST00000462996 PNPLA6Q8IY17 1366 aa31.19■■■□□ 2.58
PTPN18-208ENST00000462996 SETBP1Q9Y6X0 1596 aa31.18■■■□□ 2.58
PTPN18-208ENST00000462996 METP08581 1390 aa31.17■■■□□ 2.58
PTPN18-208ENST00000462996 NUP155O75694 1391 aa31.15■■■□□ 2.58
PTPN18-208ENST00000462996 ROCK1Q13464 1354 aa31.13■■■□□ 2.57
PTPN18-208ENST00000462996 ADGRL3Q9HAR2 1447 aa31.12■■■□□ 2.57
PTPN18-208ENST00000462996 ADAMTS2O95450 1211 aa31.09■■■□□ 2.57
PTPN18-208ENST00000462996 NGLY1Q96IV0 654 aa31.09■■■□□ 2.57
PTPN18-208ENST00000462996 NALCNQ8IZF0 1738 aa31.09■■■□□ 2.57
PTPN18-208ENST00000462996 ZNF326Q5BKZ1 582 aaKnown RBP31.07■■■□□ 2.56
PTPN18-208ENST00000462996 SPHKAPQ2M3C7 1700 aa31.04■■■□□ 2.56
PTPN18-208ENST00000462996 C1orf167Q5SNV9 1468 aa31.03■■■□□ 2.56
PTPN18-208ENST00000462996 EP400Q96L91 3159 aa31.01■■■□□ 2.55
PTPN18-208ENST00000462996 LAMC1P11047 1609 aa31.01■■■□□ 2.55
PTPN18-208ENST00000462996 ATAD2Q6PL18 1390 aa31.01■■■□□ 2.55
PTPN18-208ENST00000462996 USP21Q9UK80 565 aa30.99■■■□□ 2.55
PTPN18-208ENST00000462996 SOS2Q07890 1332 aaPredicted RBP30.98■■■□□ 2.55
PTPN18-208ENST00000462996 ORAI2Q96SN7 254 aa30.98■■■□□ 2.55
PTPN18-208ENST00000462996 NEXMIFQ5QGS0 1516 aa30.98■■■□□ 2.55
PTPN18-208ENST00000462996 TRPC5Q9UL62 973 aaPredicted RBP30.96■■■□□ 2.55
PTPN18-208ENST00000462996 FNBP4Q8N3X1 1017 aaPredicted RBP30.95■■■□□ 2.55
PTPN18-208ENST00000462996 ITGAEP38570 1179 aa30.94■■■□□ 2.54
PTPN18-208ENST00000462996 CLTCL1P53675 1640 aa30.92■■■□□ 2.54
PTPN18-208ENST00000462996 PTCH1Q13635 1447 aa30.91■■■□□ 2.54
PTPN18-208ENST00000462996 ROBO2Q9HCK4 1378 aa30.91■■■□□ 2.54
PTPN18-208ENST00000462996 ATRNO75882 1429 aa30.9■■■□□ 2.54
PTPN18-208ENST00000462996 ZRANB1Q9UGI0 708 aa30.89■■■□□ 2.54
PTPN18-208ENST00000462996 COL22A1Q8NFW1 1626 aaPredicted RBP30.86■■■□□ 2.53
PTPN18-208ENST00000462996 KIF1BO60333 1816 aa30.83■■■□□ 2.53
PTPN18-208ENST00000462996 FOXD1Q16676 465 aa30.81■■■□□ 2.52
PTPN18-208ENST00000462996 MYOM2P54296 1465 aa30.81■■■□□ 2.52
PTPN18-208ENST00000462996 BCL9LQ86UU0 1499 aa30.81■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms