RNA–Protein interactions for RNA: ENST00000462733.5

ATPAF2-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 1 (best)

Gene ATPAF2, Length 1,737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-202ENST00000462733 NUTM2DQ5VT03 806 aaPredicted RBP25.69■■□□□ 1.7
ATPAF2-202ENST00000462733 THEMISQ8N1K5 641 aaPredicted RBP25.68■■□□□ 1.7
ATPAF2-202ENST00000462733 RPGRIP1LQ68CZ1 1315 aa25.66■■□□□ 1.7
ATPAF2-202ENST00000462733 PPLO60437 1756 aa25.66■■□□□ 1.7
ATPAF2-202ENST00000462733 NEXMIFQ5QGS0 1516 aa25.66■■□□□ 1.7
ATPAF2-202ENST00000462733 IFT172Q9UG01 1749 aa25.65■■□□□ 1.7
ATPAF2-202ENST00000462733 TMEM2Q9UHN6 1383 aa25.65■■□□□ 1.7
ATPAF2-202ENST00000462733 RIMS2Q9UQ26 1411 aa25.65■■□□□ 1.7
ATPAF2-202ENST00000462733 PPP1R15AO75807 674 aaPredicted RBP25.62■■□□□ 1.69
ATPAF2-202ENST00000462733 SENP3Q9H4L4 574 aaPredicted RBP25.6■■□□□ 1.69
ATPAF2-202ENST00000462733 ZFYVE9O95405 1425 aa25.6■■□□□ 1.69
ATPAF2-202ENST00000462733 ADGRF5Q8IZF2 1346 aa25.6■■□□□ 1.69
ATPAF2-202ENST00000462733 SLIT1O75093 1534 aa25.59■■□□□ 1.69
ATPAF2-202ENST00000462733 LMTK3Q96Q04 1460 aa25.58■■□□□ 1.69
ATPAF2-202ENST00000462733 VGFO15240 615 aaPredicted RBP25.58■■□□□ 1.69
ATPAF2-202ENST00000462733 HDGFP51858 240 aaKnown RBP25.58■■□□□ 1.69
ATPAF2-202ENST00000462733 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.58■■□□□ 1.69
ATPAF2-202ENST00000462733 MYOM2P54296 1465 aa25.58■■□□□ 1.68
ATPAF2-202ENST00000462733 ARHGAP23Q9P227 1491 aa25.58■■□□□ 1.68
ATPAF2-202ENST00000462733 TXNDC2Q86VQ3 553 aa25.57■■□□□ 1.68
ATPAF2-202ENST00000462733 EID1Q9Y6B2 187 aa25.57■■□□□ 1.68
ATPAF2-202ENST00000462733 LTKP29376 864 aa25.57■■□□□ 1.68
ATPAF2-202ENST00000462733 HSPA2P54652 639 aa25.57■■□□□ 1.68
ATPAF2-202ENST00000462733 STAC3Q96MF2 364 aa25.57■■□□□ 1.68
ATPAF2-202ENST00000462733 NBPF8Q3BBV2 869 aa25.55■■□□□ 1.68
ATPAF2-202ENST00000462733 MIER1Q8N108 512 aa25.54■■□□□ 1.68
ATPAF2-202ENST00000462733 PRAG1Q86YV5 1406 aa25.54■■□□□ 1.68
ATPAF2-202ENST00000462733 ANKLE2Q86XL3 938 aa25.52■■□□□ 1.68
ATPAF2-202ENST00000462733 SCAF11Q99590 1463 aaKnown RBP25.51■■□□□ 1.67
ATPAF2-202ENST00000462733 NRXN1Q9ULB1 1477 aa25.51■■□□□ 1.67
ATPAF2-202ENST00000462733 PELP1Q8IZL8 1130 aaKnown RBP25.51■■□□□ 1.67
ATPAF2-202ENST00000462733 BCANQ96GW7 911 aa25.51■■□□□ 1.67
ATPAF2-202ENST00000462733 AEBP2Q6ZN18 517 aaPredicted RBP25.5■■□□□ 1.67
ATPAF2-202ENST00000462733 PIK3C2GO75747 1445 aa25.49■■□□□ 1.67
ATPAF2-202ENST00000462733 NCKAP5LQ9HCH0 1330 aa25.48■■□□□ 1.67
ATPAF2-202ENST00000462733 POLR1AO95602 1720 aaPredicted RBP25.46■■□□□ 1.67
ATPAF2-202ENST00000462733 CFAP70Q5T0N1 1121 aa25.46■■□□□ 1.67
ATPAF2-202ENST00000462733 PLEKHG1Q9ULL1 1385 aa25.45■■□□□ 1.67
ATPAF2-202ENST00000462733 IQGAP1P46940 1657 aa25.44■■□□□ 1.66
ATPAF2-202ENST00000462733 TRPM1Q7Z4N2 1603 aa25.44■■□□□ 1.66
ATPAF2-202ENST00000462733 C14orf93Q9H972 538 aaKnown RBP25.42■■□□□ 1.66
ATPAF2-202ENST00000462733 NRXN3Q9Y4C0 1643 aa25.42■■□□□ 1.66
ATPAF2-202ENST00000462733 NBPF1Q3BBV0 1214 aa25.41■■□□□ 1.66
ATPAF2-202ENST00000462733 SETBP1Q9Y6X0 1596 aa25.41■■□□□ 1.66
ATPAF2-202ENST00000462733 RALGAPBQ86X10 1494 aa25.4■■□□□ 1.66
ATPAF2-202ENST00000462733 ALKQ9UM73 1620 aa25.4■■□□□ 1.66
ATPAF2-202ENST00000462733 SLC26A8Q96RN1 970 aa25.4■■□□□ 1.66
ATPAF2-202ENST00000462733 GTF3C3Q9Y5Q9 886 aa25.4■■□□□ 1.66
ATPAF2-202ENST00000462733 ROCK2O75116 1388 aaKnown RBP25.39■■□□□ 1.66
ATPAF2-202ENST00000462733 KIAA1210Q9ULL0 1709 aa25.39■■□□□ 1.66
ATPAF2-202ENST00000462733 NPHP4O75161 1426 aaPredicted RBP25.39■■□□□ 1.65
ATPAF2-202ENST00000462733 ADAMTS13Q76LX8 1427 aa25.38■■□□□ 1.65
ATPAF2-202ENST00000462733 STRCQ7RTU9 1775 aa25.37■■□□□ 1.65
ATPAF2-202ENST00000462733 LAMC1P11047 1609 aa25.37■■□□□ 1.65
ATPAF2-202ENST00000462733 MED14O60244 1454 aa25.37■■□□□ 1.65
ATPAF2-202ENST00000462733 TMEM132EQ6IEE7 984 aa25.37■■□□□ 1.65
ATPAF2-202ENST00000462733 CARD11Q9BXL7 1154 aa25.34■■□□□ 1.65
ATPAF2-202ENST00000462733 SETD1AO15047 1707 aaKnown RBP25.34■■□□□ 1.65
ATPAF2-202ENST00000462733 TBX22Q9Y458 520 aa25.32■■□□□ 1.64
ATPAF2-202ENST00000462733 ASXL1Q8IXJ9 1541 aa25.31■■□□□ 1.64
ATPAF2-202ENST00000462733 METP08581 1390 aa25.31■■□□□ 1.64
ATPAF2-202ENST00000462733 ADGRB1O14514 1584 aa25.3■■□□□ 1.64
ATPAF2-202ENST00000462733 DIP2AQ14689 1571 aa25.3■■□□□ 1.64
ATPAF2-202ENST00000462733 GPRASP1Q5JY77 1395 aa25.3■■□□□ 1.64
ATPAF2-202ENST00000462733 STK26Q9P289 416 aa25.28■■□□□ 1.64
ATPAF2-202ENST00000462733 YTHDC1Q96MU7 727 aaKnown RBP25.26■■□□□ 1.63
ATPAF2-202ENST00000462733 TRAK1Q9UPV9 953 aa25.25■■□□□ 1.63
ATPAF2-202ENST00000462733 YTHDC2Q9H6S0 1430 aaKnown RBP25.24■■□□□ 1.63
ATPAF2-202ENST00000462733 USP47Q96K76 1375 aa25.22■■□□□ 1.63
ATPAF2-202ENST00000462733 PTPRUQ92729 1446 aa25.22■■□□□ 1.63
ATPAF2-202ENST00000462733 LRPPRCP42704 1394 aaKnown RBP25.21■■□□□ 1.63
ATPAF2-202ENST00000462733 EIF4G2P78344 907 aaKnown RBP eCLIP25.2■■□□□ 1.62
ATPAF2-202ENST00000462733 DMRT2Q9Y5R5 561 aa25.2■■□□□ 1.62
ATPAF2-202ENST00000462733 PIK3R4Q99570 1358 aa25.19■■□□□ 1.62
ATPAF2-202ENST00000462733 AMOTL2Q9Y2J4 779 aa25.19■■□□□ 1.62
ATPAF2-202ENST00000462733 CHD2O14647 1828 aaKnown RBP25.18■■□□□ 1.62
ATPAF2-202ENST00000462733 HIRIP3Q9BW71 556 aaPredicted RBP25.18■■□□□ 1.62
ATPAF2-202ENST00000462733 HSPA5P11021 654 aaKnown RBP25.17■■□□□ 1.62
ATPAF2-202ENST00000462733 ABCC11Q96J66 1382 aa25.16■■□□□ 1.62
ATPAF2-202ENST00000462733 ARHGEF28Q8N1W1 1705 aaKnown RBP25.15■■□□□ 1.62
ATPAF2-202ENST00000462733 KNDC1Q76NI1 1749 aa25.15■■□□□ 1.62
ATPAF2-202ENST00000462733 EIF3AQ14152 1382 aaKnown RBP25.15■■□□□ 1.62
ATPAF2-202ENST00000462733 ST20-MTHFSA0A0A6YYL1 179 aa25.15■■□□□ 1.62
ATPAF2-202ENST00000462733 KCNA6P17658 529 aa25.14■■□□□ 1.61
ATPAF2-202ENST00000462733 XRN1Q8IZH2 1706 aaKnown RBP25.13■■□□□ 1.61
ATPAF2-202ENST00000462733 SAFB2Q14151 953 aaKnown RBP eCLIP25.12■■□□□ 1.61
ATPAF2-202ENST00000462733 PRAM1Q96QH2 718 aa25.12■■□□□ 1.61
ATPAF2-202ENST00000462733 TECPR2O15040 1411 aa25.12■■□□□ 1.61
ATPAF2-202ENST00000462733 WAPLQ7Z5K2 1190 aa25.12■■□□□ 1.61
ATPAF2-202ENST00000462733 POGKQ9P215 609 aa25.12■■□□□ 1.61
ATPAF2-202ENST00000462733 ROBO2Q9HCK4 1378 aa25.11■■□□□ 1.61
ATPAF2-202ENST00000462733 DLC1Q96QB1 1528 aa25.11■■□□□ 1.61
ATPAF2-202ENST00000462733 CPS1P31327 1500 aa25.1■■□□□ 1.61
ATPAF2-202ENST00000462733 CENPJQ9HC77 1338 aaPredicted RBP25.1■■□□□ 1.61
ATPAF2-202ENST00000462733 NWD1Q149M9 1564 aa25.09■■□□□ 1.61
ATPAF2-202ENST00000462733 STRCP1A6NGW2 1772 aa25.09■■□□□ 1.61
ATPAF2-202ENST00000462733 ZNF335Q9H4Z2 1342 aaPredicted RBP25.09■■□□□ 1.61
ATPAF2-202ENST00000462733 PLEKHH1Q9ULM0 1364 aa25.08■■□□□ 1.61
ATPAF2-202ENST00000462733 PTCH1Q13635 1447 aa25.07■■□□□ 1.6
ATPAF2-202ENST00000462733 QRICH2Q9H0J4 1663 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms