RNA–Protein interactions for RNA: ENST00000462488.1

PGBD2-203, Transcript of piggyBac transposable element derived 2, humanhuman

TSL 5

Gene PGBD2, Length 282 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-203ENST00000462488 SPHKAPQ2M3C7 1700 aa12.36□□□□□ -0.43
PGBD2-203ENST00000462488 RIMS2Q9UQ26 1411 aa12.36□□□□□ -0.43
PGBD2-203ENST00000462488 KDM5AP29375 1690 aaKnown RBP12.35□□□□□ -0.43
PGBD2-203ENST00000462488 ARHGAP23Q9P227 1491 aa12.35□□□□□ -0.43
PGBD2-203ENST00000462488 UBAP1LF5GYI3 381 aa12.35□□□□□ -0.43
PGBD2-203ENST00000462488 MPHOSPH9Q99550 1183 aa12.35□□□□□ -0.43
PGBD2-203ENST00000462488 LTBP4Q8N2S1 1624 aa12.35□□□□□ -0.43
PGBD2-203ENST00000462488 ACIN1Q9UKV3 1341 aaKnown RBP12.35□□□□□ -0.43
PGBD2-203ENST00000462488 TMEM131LA2VDJ0 1609 aa12.33□□□□□ -0.44
PGBD2-203ENST00000462488 CPS1P31327 1500 aa12.32□□□□□ -0.44
PGBD2-203ENST00000462488 RAB3GAP2Q9H2M9 1393 aa12.31□□□□□ -0.44
PGBD2-203ENST00000462488 PIP4K2BP78356 416 aa12.31□□□□□ -0.44
PGBD2-203ENST00000462488 KIF1BO60333 1816 aa12.31□□□□□ -0.44
PGBD2-203ENST00000462488 TOM1O60784 492 aa12.3□□□□□ -0.44
PGBD2-203ENST00000462488 PROSER2Q86WR7 435 aaPredicted RBP12.3□□□□□ -0.44
PGBD2-203ENST00000462488 TRPM2O94759 1503 aa12.29□□□□□ -0.44
PGBD2-203ENST00000462488 RGL3Q3MIN7 710 aa12.29□□□□□ -0.44
PGBD2-203ENST00000462488 CLTCL1P53675 1640 aa12.29□□□□□ -0.44
PGBD2-203ENST00000462488 PLEKHG1Q9ULL1 1385 aa12.29□□□□□ -0.44
PGBD2-203ENST00000462488 IQSEC2Q5JU85 1478 aa12.28□□□□□ -0.44
PGBD2-203ENST00000462488 KCNA6P17658 529 aa12.28□□□□□ -0.44
PGBD2-203ENST00000462488 C14orf37Q86TY3 774 aa12.28□□□□□ -0.44
PGBD2-203ENST00000462488 CCDC144AA2RUR9 1427 aa12.28□□□□□ -0.44
PGBD2-203ENST00000462488 ZFYVE9O95405 1425 aa12.28□□□□□ -0.44
PGBD2-203ENST00000462488 RBM33Q96EV2 1170 aaKnown RBP12.27□□□□□ -0.45
PGBD2-203ENST00000462488 ADRA2BP18089 450 aa12.26□□□□□ -0.45
PGBD2-203ENST00000462488 TBX22Q9Y458 520 aa12.26□□□□□ -0.45
PGBD2-203ENST00000462488 VGFO15240 615 aaPredicted RBP12.25□□□□□ -0.45
PGBD2-203ENST00000462488 STRCP1A6NGW2 1772 aa12.25□□□□□ -0.45
PGBD2-203ENST00000462488 LRRC7Q96NW7 1537 aa12.24□□□□□ -0.45
PGBD2-203ENST00000462488 RPGRIP1LQ68CZ1 1315 aa12.23□□□□□ -0.45
PGBD2-203ENST00000462488 TMEM94Q12767 1356 aa12.22□□□□□ -0.45
PGBD2-203ENST00000462488 AMOTL2Q9Y2J4 779 aa12.22□□□□□ -0.45
PGBD2-203ENST00000462488 HRCP23327 699 aa12.21□□□□□ -0.45
PGBD2-203ENST00000462488 ADAMTS13Q76LX8 1427 aa12.2□□□□□ -0.46
PGBD2-203ENST00000462488 MSH6P52701 1360 aa12.19□□□□□ -0.46
PGBD2-203ENST00000462488 DIP2AQ14689 1571 aa12.19□□□□□ -0.46
PGBD2-203ENST00000462488 CHD2O14647 1828 aaKnown RBP12.19□□□□□ -0.46
PGBD2-203ENST00000462488 NEXMIFQ5QGS0 1516 aa12.19□□□□□ -0.46
PGBD2-203ENST00000462488 NKTRP30414 1462 aaKnown RBP12.18□□□□□ -0.46
PGBD2-203ENST00000462488 PIK3R4Q99570 1358 aa12.18□□□□□ -0.46
PGBD2-203ENST00000462488 ATF3P18847 181 aa12.17□□□□□ -0.46
PGBD2-203ENST00000462488 KDM2AQ9Y2K7 1162 aa12.16□□□□□ -0.46
PGBD2-203ENST00000462488 ANKRD30BQ9BXX2 1392 aa12.16□□□□□ -0.46
PGBD2-203ENST00000462488 PPLO60437 1756 aa12.15□□□□□ -0.46
PGBD2-203ENST00000462488 ADGRF5Q8IZF2 1346 aa12.15□□□□□ -0.46
PGBD2-203ENST00000462488 NWD1Q149M9 1564 aa12.15□□□□□ -0.46
PGBD2-203ENST00000462488 SETBP1Q9Y6X0 1596 aa12.15□□□□□ -0.46
PGBD2-203ENST00000462488 HSPA1LP34931 641 aa12.15□□□□□ -0.46
PGBD2-203ENST00000462488 TRIM26Q12899 539 aaPredicted RBP12.15□□□□□ -0.46
PGBD2-203ENST00000462488 STK26Q9P289 416 aa12.15□□□□□ -0.46
PGBD2-203ENST00000462488 XIRP1Q702N8 1843 aaKnown RBP12.15□□□□□ -0.46
PGBD2-203ENST00000462488 METP08581 1390 aa12.15□□□□□ -0.46
PGBD2-203ENST00000462488 C19orf44Q9H6X5 657 aa12.14□□□□□ -0.47
PGBD2-203ENST00000462488 NRXN3Q9Y4C0 1643 aa12.13□□□□□ -0.47
PGBD2-203ENST00000462488 CADPS2Q86UW7 1296 aa12.13□□□□□ -0.47
PGBD2-203ENST00000462488 DCAF11Q8TEB1 546 aa12.13□□□□□ -0.47
PGBD2-203ENST00000462488 SLAIN2Q9P270 581 aa12.13□□□□□ -0.47
PGBD2-203ENST00000462488 SPATA31E1Q6ZUB1 1445 aa12.12□□□□□ -0.47
PGBD2-203ENST00000462488 PTPRUQ92729 1446 aa12.12□□□□□ -0.47
PGBD2-203ENST00000462488 ALKQ9UM73 1620 aa12.12□□□□□ -0.47
PGBD2-203ENST00000462488 TMEM132EQ6IEE7 984 aa12.11□□□□□ -0.47
PGBD2-203ENST00000462488 DISP3Q9P2K9 1392 aa12.09□□□□□ -0.47
PGBD2-203ENST00000462488 NEUROD1Q13562 356 aa12.09□□□□□ -0.47
PGBD2-203ENST00000462488 NCOA3Q9Y6Q9 1424 aa12.09□□□□□ -0.47
PGBD2-203ENST00000462488 CFAP70Q5T0N1 1121 aa12.08□□□□□ -0.48
PGBD2-203ENST00000462488 IFT172Q9UG01 1749 aa12.08□□□□□ -0.48
PGBD2-203ENST00000462488 XRN1Q8IZH2 1706 aaKnown RBP12.07□□□□□ -0.48
PGBD2-203ENST00000462488 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.07□□□□□ -0.48
PGBD2-203ENST00000462488 DHX57Q6P158 1386 aaKnown RBP12.06□□□□□ -0.48
PGBD2-203ENST00000462488 FAM135BQ49AJ0 1406 aa12.06□□□□□ -0.48
PGBD2-203ENST00000462488 ROBO1Q9Y6N7 1651 aa12.06□□□□□ -0.48
PGBD2-203ENST00000462488 ROBO2Q9HCK4 1378 aa12.05□□□□□ -0.48
PGBD2-203ENST00000462488 PIK3C2GO75747 1445 aa12.05□□□□□ -0.48
PGBD2-203ENST00000462488 SAFB2Q14151 953 aaKnown RBP eCLIP12.05□□□□□ -0.48
PGBD2-203ENST00000462488 WAPLQ7Z5K2 1190 aa12.05□□□□□ -0.48
PGBD2-203ENST00000462488 C14orf93Q9H972 538 aaKnown RBP12.05□□□□□ -0.48
PGBD2-203ENST00000462488 POGKQ9P215 609 aa12.05□□□□□ -0.48
PGBD2-203ENST00000462488 MYOM2P54296 1465 aa12.04□□□□□ -0.48
PGBD2-203ENST00000462488 SETD1AO15047 1707 aaKnown RBP12.04□□□□□ -0.48
PGBD2-203ENST00000462488 STAC3Q96MF2 364 aa12.04□□□□□ -0.48
PGBD2-203ENST00000462488 LRPPRCP42704 1394 aaKnown RBP12.04□□□□□ -0.48
PGBD2-203ENST00000462488 PTCH1Q13635 1447 aa12.03□□□□□ -0.48
PGBD2-203ENST00000462488 ADGRL3Q9HAR2 1447 aa12.03□□□□□ -0.48
PGBD2-203ENST00000462488 NUTM2FA1L443 756 aa12.03□□□□□ -0.48
PGBD2-203ENST00000462488 SIN3AQ96ST3 1273 aa12.03□□□□□ -0.48
PGBD2-203ENST00000462488 TRAK1Q9UPV9 953 aa12.03□□□□□ -0.48
PGBD2-203ENST00000462488 YTHDC2Q9H6S0 1430 aaKnown RBP12.03□□□□□ -0.48
PGBD2-203ENST00000462488 DCCP43146 1447 aa12.02□□□□□ -0.49
PGBD2-203ENST00000462488 PHLPP1O60346 1717 aa12.01□□□□□ -0.49
PGBD2-203ENST00000462488 BRINP3Q76B58 766 aa12.01□□□□□ -0.49
PGBD2-203ENST00000462488 ABCC11Q96J66 1382 aa12.01□□□□□ -0.49
PGBD2-203ENST00000462488 LAMC1P11047 1609 aa12□□□□□ -0.49
PGBD2-203ENST00000462488 NALCNQ8IZF0 1738 aa12□□□□□ -0.49
PGBD2-203ENST00000462488 ESCO1Q5FWF5 840 aa12□□□□□ -0.49
PGBD2-203ENST00000462488 PRAM1Q96QH2 718 aa12□□□□□ -0.49
PGBD2-203ENST00000462488 PCGF6Q9BYE7 350 aa12□□□□□ -0.49
PGBD2-203ENST00000462488 NRXN1Q9ULB1 1477 aa11.99□□□□□ -0.49
PGBD2-203ENST00000462488 MST1RQ04912 1400 aa11.98□□□□□ -0.49
PGBD2-203ENST00000462488 PLEKHH1Q9ULM0 1364 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms