RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 EID1Q9Y6B2 187 aa17.21■□□□□ 0.35
CPNE1-221ENST00000462352 POLR1AO95602 1720 aaPredicted RBP17.2■□□□□ 0.34
CPNE1-221ENST00000462352 HDGFP51858 240 aaKnown RBP17.19■□□□□ 0.34
CPNE1-221ENST00000462352 RGL3Q3MIN7 710 aa17.19■□□□□ 0.34
CPNE1-221ENST00000462352 MED14O60244 1454 aa17.18■□□□□ 0.34
CPNE1-221ENST00000462352 NEXMIFQ5QGS0 1516 aa17.18■□□□□ 0.34
CPNE1-221ENST00000462352 NUTM2DQ5VT03 806 aaPredicted RBP17.18■□□□□ 0.34
CPNE1-221ENST00000462352 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.18■□□□□ 0.34
CPNE1-221ENST00000462352 RPGRIP1LQ68CZ1 1315 aa17.18■□□□□ 0.34
CPNE1-221ENST00000462352 NPHP4O75161 1426 aaPredicted RBP17.17■□□□□ 0.34
CPNE1-221ENST00000462352 PPP1R15AO75807 674 aaPredicted RBP17.17■□□□□ 0.34
CPNE1-221ENST00000462352 SIN3AQ96ST3 1273 aa17.17■□□□□ 0.34
CPNE1-221ENST00000462352 DMRT2Q9Y5R5 561 aa17.17■□□□□ 0.34
CPNE1-221ENST00000462352 NEUROD1Q13562 356 aa17.14■□□□□ 0.33
CPNE1-221ENST00000462352 PLEKHG1Q9ULL1 1385 aa17.14■□□□□ 0.33
CPNE1-221ENST00000462352 IQGAP1P46940 1657 aa17.13■□□□□ 0.33
CPNE1-221ENST00000462352 PPLO60437 1756 aa17.13■□□□□ 0.33
CPNE1-221ENST00000462352 VGFO15240 615 aaPredicted RBP17.12■□□□□ 0.33
CPNE1-221ENST00000462352 SENP3Q9H4L4 574 aaPredicted RBP17.12■□□□□ 0.33
CPNE1-221ENST00000462352 IFT172Q9UG01 1749 aa17.12■□□□□ 0.33
CPNE1-221ENST00000462352 CCER1Q8TC90 406 aaPredicted RBP17.11■□□□□ 0.33
CPNE1-221ENST00000462352 CLSPNQ9HAW4 1339 aa17.11■□□□□ 0.33
CPNE1-221ENST00000462352 BCANQ96GW7 911 aa17.1■□□□□ 0.33
CPNE1-221ENST00000462352 ADGRF5Q8IZF2 1346 aa17.09■□□□□ 0.33
CPNE1-221ENST00000462352 MYOM2P54296 1465 aa17.08■□□□□ 0.32
CPNE1-221ENST00000462352 DCAF11Q8TEB1 546 aa17.08■□□□□ 0.32
CPNE1-221ENST00000462352 SLC26A8Q96RN1 970 aa17.08■□□□□ 0.32
CPNE1-221ENST00000462352 ADAMTS13Q76LX8 1427 aa17.07■□□□□ 0.32
CPNE1-221ENST00000462352 NRXN3Q9Y4C0 1643 aa17.07■□□□□ 0.32
CPNE1-221ENST00000462352 SETBP1Q9Y6X0 1596 aa17.06■□□□□ 0.32
CPNE1-221ENST00000462352 KDM2AQ9Y2K7 1162 aa17.06■□□□□ 0.32
CPNE1-221ENST00000462352 L3MBTL2Q969R5 705 aa17.05■□□□□ 0.32
CPNE1-221ENST00000462352 STAC3Q96MF2 364 aa17.05■□□□□ 0.32
CPNE1-221ENST00000462352 NRXN1Q9ULB1 1477 aa17.05■□□□□ 0.32
CPNE1-221ENST00000462352 DIP2AQ14689 1571 aa17.04■□□□□ 0.32
CPNE1-221ENST00000462352 TBX22Q9Y458 520 aa17.04■□□□□ 0.32
CPNE1-221ENST00000462352 PIK3C2GO75747 1445 aa17.04■□□□□ 0.32
CPNE1-221ENST00000462352 TONSLQ96HA7 1378 aa17.02■□□□□ 0.32
CPNE1-221ENST00000462352 ZNF335Q9H4Z2 1342 aaPredicted RBP17.02■□□□□ 0.32
CPNE1-221ENST00000462352 ALKQ9UM73 1620 aa17.01■□□□□ 0.31
CPNE1-221ENST00000462352 METP08581 1390 aa16.99■□□□□ 0.31
CPNE1-221ENST00000462352 SETD1AO15047 1707 aaKnown RBP16.99■□□□□ 0.31
CPNE1-221ENST00000462352 C14orf93Q9H972 538 aaKnown RBP16.98■□□□□ 0.31
CPNE1-221ENST00000462352 PIK3R4Q99570 1358 aa16.98■□□□□ 0.31
CPNE1-221ENST00000462352 PRAG1Q86YV5 1406 aa16.97■□□□□ 0.31
CPNE1-221ENST00000462352 KCNA6P17658 529 aa16.97■□□□□ 0.31
CPNE1-221ENST00000462352 CFAP70Q5T0N1 1121 aa16.97■□□□□ 0.31
CPNE1-221ENST00000462352 LTBP4Q8N2S1 1624 aa16.96■□□□□ 0.31
CPNE1-221ENST00000462352 LAMC1P11047 1609 aa16.96■□□□□ 0.3
CPNE1-221ENST00000462352 PTPRUQ92729 1446 aa16.96■□□□□ 0.3
CPNE1-221ENST00000462352 STRCP1A6NGW2 1772 aa16.95■□□□□ 0.3
CPNE1-221ENST00000462352 NWD1Q149M9 1564 aa16.95■□□□□ 0.3
CPNE1-221ENST00000462352 TIMELESSQ9UNS1 1208 aa16.95■□□□□ 0.3
CPNE1-221ENST00000462352 ASXL1Q8IXJ9 1541 aa16.95■□□□□ 0.3
CPNE1-221ENST00000462352 CHD2O14647 1828 aaKnown RBP16.94■□□□□ 0.3
CPNE1-221ENST00000462352 CPS1P31327 1500 aa16.93■□□□□ 0.3
CPNE1-221ENST00000462352 TMEM132EQ6IEE7 984 aa16.93■□□□□ 0.3
CPNE1-221ENST00000462352 AMOTL2Q9Y2J4 779 aa16.93■□□□□ 0.3
CPNE1-221ENST00000462352 XRN1Q8IZH2 1706 aaKnown RBP16.91■□□□□ 0.3
CPNE1-221ENST00000462352 NBPF8Q3BBV2 869 aa16.91■□□□□ 0.3
CPNE1-221ENST00000462352 NKTRP30414 1462 aaKnown RBP16.91■□□□□ 0.3
CPNE1-221ENST00000462352 ADGRB1O14514 1584 aa16.9■□□□□ 0.3
CPNE1-221ENST00000462352 KIAA1210Q9ULL0 1709 aa16.9■□□□□ 0.3
CPNE1-221ENST00000462352 LRRC7Q96NW7 1537 aa16.89■□□□□ 0.29
CPNE1-221ENST00000462352 LRPPRCP42704 1394 aaKnown RBP16.89■□□□□ 0.29
CPNE1-221ENST00000462352 YTHDC2Q9H6S0 1430 aaKnown RBP16.88■□□□□ 0.29
CPNE1-221ENST00000462352 NBPF1Q3BBV0 1214 aa16.88■□□□□ 0.29
CPNE1-221ENST00000462352 STK26Q9P289 416 aa16.88■□□□□ 0.29
CPNE1-221ENST00000462352 TRPM1Q7Z4N2 1603 aa16.88■□□□□ 0.29
CPNE1-221ENST00000462352 PROSER2Q86WR7 435 aaPredicted RBP16.87■□□□□ 0.29
CPNE1-221ENST00000462352 ABCC11Q96J66 1382 aa16.87■□□□□ 0.29
CPNE1-221ENST00000462352 PTCH1Q13635 1447 aa16.87■□□□□ 0.29
CPNE1-221ENST00000462352 CERKQ8TCT0 537 aa16.86■□□□□ 0.29
CPNE1-221ENST00000462352 TMEM94Q12767 1356 aa16.86■□□□□ 0.29
CPNE1-221ENST00000462352 TECPR2O15040 1411 aa16.86■□□□□ 0.29
CPNE1-221ENST00000462352 RBM33Q96EV2 1170 aaKnown RBP16.85■□□□□ 0.29
CPNE1-221ENST00000462352 ROBO2Q9HCK4 1378 aa16.85■□□□□ 0.29
CPNE1-221ENST00000462352 KNDC1Q76NI1 1749 aa16.84■□□□□ 0.29
CPNE1-221ENST00000462352 ROCK2O75116 1388 aaKnown RBP16.84■□□□□ 0.29
CPNE1-221ENST00000462352 RALGAPBQ86X10 1494 aa16.83■□□□□ 0.28
CPNE1-221ENST00000462352 TRAK1Q9UPV9 953 aa16.83■□□□□ 0.28
CPNE1-221ENST00000462352 XIRP1Q702N8 1843 aaKnown RBP16.82■□□□□ 0.28
CPNE1-221ENST00000462352 DLC1Q96QB1 1528 aa16.81■□□□□ 0.28
CPNE1-221ENST00000462352 IQSEC2Q5JU85 1478 aa16.81■□□□□ 0.28
CPNE1-221ENST00000462352 NCOA3Q9Y6Q9 1424 aa16.81■□□□□ 0.28
CPNE1-221ENST00000462352 GPRASP1Q5JY77 1395 aa16.81■□□□□ 0.28
CPNE1-221ENST00000462352 SIRT1Q96EB6 747 aa16.81■□□□□ 0.28
CPNE1-221ENST00000462352 FAM135BQ49AJ0 1406 aa16.8■□□□□ 0.28
CPNE1-221ENST00000462352 WAPLQ7Z5K2 1190 aa16.8■□□□□ 0.28
CPNE1-221ENST00000462352 PLEKHH1Q9ULM0 1364 aa16.79■□□□□ 0.28
CPNE1-221ENST00000462352 C14orf37Q86TY3 774 aa16.78■□□□□ 0.28
CPNE1-221ENST00000462352 PRAM1Q96QH2 718 aa16.78■□□□□ 0.28
CPNE1-221ENST00000462352 CARD11Q9BXL7 1154 aa16.78■□□□□ 0.28
CPNE1-221ENST00000462352 ARHGEF28Q8N1W1 1705 aaKnown RBP16.77■□□□□ 0.28
CPNE1-221ENST00000462352 POGKQ9P215 609 aa16.77■□□□□ 0.28
CPNE1-221ENST00000462352 ADGRL3Q9HAR2 1447 aa16.77■□□□□ 0.27
CPNE1-221ENST00000462352 MSH6P52701 1360 aa16.77■□□□□ 0.27
CPNE1-221ENST00000462352 SAFB2Q14151 953 aaKnown RBP eCLIP16.75■□□□□ 0.27
CPNE1-221ENST00000462352 C19orf44Q9H6X5 657 aa16.75■□□□□ 0.27
CPNE1-221ENST00000462352 NALCNQ8IZF0 1738 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms