RNA–Protein interactions for RNA: ENST00000462324.2

PHGDH-203, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 5

Gene PHGDH, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-203ENST00000462324 CLSPNQ9HAW4 1339 aa19.07■□□□□ 0.64
PHGDH-203ENST00000462324 VGFO15240 615 aaPredicted RBP19.07■□□□□ 0.64
PHGDH-203ENST00000462324 LTKP29376 864 aa19.07■□□□□ 0.64
PHGDH-203ENST00000462324 STAC3Q96MF2 364 aa19.06■□□□□ 0.64
PHGDH-203ENST00000462324 SPATA31E1Q6ZUB1 1445 aa19.06■□□□□ 0.64
PHGDH-203ENST00000462324 SCAF11Q99590 1463 aaKnown RBP19.05■□□□□ 0.64
PHGDH-203ENST00000462324 CCER1Q8TC90 406 aaPredicted RBP19.05■□□□□ 0.64
PHGDH-203ENST00000462324 NEURL4Q96JN8 1562 aa19.05■□□□□ 0.64
PHGDH-203ENST00000462324 ZFYVE9O95405 1425 aa19.04■□□□□ 0.64
PHGDH-203ENST00000462324 KIF1BO60333 1816 aa19.04■□□□□ 0.64
PHGDH-203ENST00000462324 NEUROD1Q13562 356 aa19.03■□□□□ 0.64
PHGDH-203ENST00000462324 SIN3AQ96ST3 1273 aa19.03■□□□□ 0.64
PHGDH-203ENST00000462324 BCANQ96GW7 911 aa19.02■□□□□ 0.64
PHGDH-203ENST00000462324 MED14O60244 1454 aa19.02■□□□□ 0.63
PHGDH-203ENST00000462324 NPHP4O75161 1426 aaPredicted RBP19.01■□□□□ 0.63
PHGDH-203ENST00000462324 NUTM2DQ5VT03 806 aaPredicted RBP19.01■□□□□ 0.63
PHGDH-203ENST00000462324 PLEKHG1Q9ULL1 1385 aa19■□□□□ 0.63
PHGDH-203ENST00000462324 DCAF11Q8TEB1 546 aa18.98■□□□□ 0.63
PHGDH-203ENST00000462324 STRCQ7RTU9 1775 aa18.96■□□□□ 0.63
PHGDH-203ENST00000462324 NEXMIFQ5QGS0 1516 aa18.95■□□□□ 0.62
PHGDH-203ENST00000462324 TBX22Q9Y458 520 aa18.95■□□□□ 0.62
PHGDH-203ENST00000462324 MYO5BQ9ULV0 1848 aa18.95■□□□□ 0.62
PHGDH-203ENST00000462324 TIMELESSQ9UNS1 1208 aa18.94■□□□□ 0.62
PHGDH-203ENST00000462324 KDM2AQ9Y2K7 1162 aa18.94■□□□□ 0.62
PHGDH-203ENST00000462324 L3MBTL2Q969R5 705 aa18.93■□□□□ 0.62
PHGDH-203ENST00000462324 POLR1AO95602 1720 aaPredicted RBP18.93■□□□□ 0.62
PHGDH-203ENST00000462324 ADGRF5Q8IZF2 1346 aa18.93■□□□□ 0.62
PHGDH-203ENST00000462324 SLC26A8Q96RN1 970 aa18.92■□□□□ 0.62
PHGDH-203ENST00000462324 TONSLQ96HA7 1378 aa18.92■□□□□ 0.62
PHGDH-203ENST00000462324 MYOM2P54296 1465 aa18.9■□□□□ 0.62
PHGDH-203ENST00000462324 IQGAP1P46940 1657 aa18.89■□□□□ 0.61
PHGDH-203ENST00000462324 SENP3Q9H4L4 574 aaPredicted RBP18.89■□□□□ 0.61
PHGDH-203ENST00000462324 FBXO41Q8TF61 875 aa18.88■□□□□ 0.61
PHGDH-203ENST00000462324 PPLO60437 1756 aa18.88■□□□□ 0.61
PHGDH-203ENST00000462324 ADAMTS13Q76LX8 1427 aa18.87■□□□□ 0.61
PHGDH-203ENST00000462324 C14orf93Q9H972 538 aaKnown RBP18.87■□□□□ 0.61
PHGDH-203ENST00000462324 SETBP1Q9Y6X0 1596 aa18.86■□□□□ 0.61
PHGDH-203ENST00000462324 PIK3R4Q99570 1358 aa18.86■□□□□ 0.61
PHGDH-203ENST00000462324 NRXN1Q9ULB1 1477 aa18.85■□□□□ 0.61
PHGDH-203ENST00000462324 PIK3C2GO75747 1445 aa18.85■□□□□ 0.61
PHGDH-203ENST00000462324 KCNA6P17658 529 aa18.85■□□□□ 0.61
PHGDH-203ENST00000462324 DIP2AQ14689 1571 aa18.85■□□□□ 0.61
PHGDH-203ENST00000462324 IFT172Q9UG01 1749 aa18.83■□□□□ 0.6
PHGDH-203ENST00000462324 ZNF335Q9H4Z2 1342 aaPredicted RBP18.82■□□□□ 0.6
PHGDH-203ENST00000462324 CFAP70Q5T0N1 1121 aa18.82■□□□□ 0.6
PHGDH-203ENST00000462324 CERKQ8TCT0 537 aa18.82■□□□□ 0.6
PHGDH-203ENST00000462324 METP08581 1390 aa18.81■□□□□ 0.6
PHGDH-203ENST00000462324 AMOTL2Q9Y2J4 779 aa18.8■□□□□ 0.6
PHGDH-203ENST00000462324 ALKQ9UM73 1620 aa18.8■□□□□ 0.6
PHGDH-203ENST00000462324 PRAG1Q86YV5 1406 aa18.78■□□□□ 0.6
PHGDH-203ENST00000462324 NRXN3Q9Y4C0 1643 aa18.78■□□□□ 0.6
PHGDH-203ENST00000462324 TMEM132EQ6IEE7 984 aa18.76■□□□□ 0.59
PHGDH-203ENST00000462324 PROSER2Q86WR7 435 aaPredicted RBP18.76■□□□□ 0.59
PHGDH-203ENST00000462324 CPS1P31327 1500 aa18.75■□□□□ 0.59
PHGDH-203ENST00000462324 LAMC1P11047 1609 aa18.74■□□□□ 0.59
PHGDH-203ENST00000462324 LRPPRCP42704 1394 aaKnown RBP18.73■□□□□ 0.59
PHGDH-203ENST00000462324 ABCC11Q96J66 1382 aa18.73■□□□□ 0.59
PHGDH-203ENST00000462324 NBPF8Q3BBV2 869 aa18.73■□□□□ 0.59
PHGDH-203ENST00000462324 SIRT1Q96EB6 747 aa18.73■□□□□ 0.59
PHGDH-203ENST00000462324 PTPRUQ92729 1446 aa18.73■□□□□ 0.59
PHGDH-203ENST00000462324 STK26Q9P289 416 aa18.72■□□□□ 0.59
PHGDH-203ENST00000462324 NKTRP30414 1462 aaKnown RBP18.71■□□□□ 0.59
PHGDH-203ENST00000462324 LTBP4Q8N2S1 1624 aa18.71■□□□□ 0.59
PHGDH-203ENST00000462324 NWD1Q149M9 1564 aa18.7■□□□□ 0.58
PHGDH-203ENST00000462324 NBPF1Q3BBV0 1214 aa18.7■□□□□ 0.58
PHGDH-203ENST00000462324 YTHDC2Q9H6S0 1430 aaKnown RBP18.7■□□□□ 0.58
PHGDH-203ENST00000462324 NCOA3Q9Y6Q9 1424 aa18.69■□□□□ 0.58
PHGDH-203ENST00000462324 CHD2O14647 1828 aaKnown RBP18.69■□□□□ 0.58
PHGDH-203ENST00000462324 ROCK2O75116 1388 aaKnown RBP18.68■□□□□ 0.58
PHGDH-203ENST00000462324 SETD1AO15047 1707 aaKnown RBP18.67■□□□□ 0.58
PHGDH-203ENST00000462324 KIAA1210Q9ULL0 1709 aa18.67■□□□□ 0.58
PHGDH-203ENST00000462324 TRAK1Q9UPV9 953 aa18.67■□□□□ 0.58
PHGDH-203ENST00000462324 TMEM94Q12767 1356 aa18.67■□□□□ 0.58
PHGDH-203ENST00000462324 TECPR2O15040 1411 aa18.66■□□□□ 0.58
PHGDH-203ENST00000462324 LRRC7Q96NW7 1537 aa18.66■□□□□ 0.58
PHGDH-203ENST00000462324 C14orf37Q86TY3 774 aa18.66■□□□□ 0.58
PHGDH-203ENST00000462324 ADGRB1O14514 1584 aa18.66■□□□□ 0.58
PHGDH-203ENST00000462324 PTCH1Q13635 1447 aa18.66■□□□□ 0.58
PHGDH-203ENST00000462324 CARD11Q9BXL7 1154 aa18.65■□□□□ 0.58
PHGDH-203ENST00000462324 POGKQ9P215 609 aa18.65■□□□□ 0.58
PHGDH-203ENST00000462324 FAM135BQ49AJ0 1406 aa18.65■□□□□ 0.58
PHGDH-203ENST00000462324 ASXL1Q8IXJ9 1541 aa18.64■□□□□ 0.58
PHGDH-203ENST00000462324 C19orf44Q9H6X5 657 aa18.64■□□□□ 0.57
PHGDH-203ENST00000462324 ROBO2Q9HCK4 1378 aa18.64■□□□□ 0.57
PHGDH-203ENST00000462324 IQSEC2Q5JU85 1478 aa18.64■□□□□ 0.57
PHGDH-203ENST00000462324 XRN1Q8IZH2 1706 aaKnown RBP18.63■□□□□ 0.57
PHGDH-203ENST00000462324 GPRASP1Q5JY77 1395 aa18.63■□□□□ 0.57
PHGDH-203ENST00000462324 WAPLQ7Z5K2 1190 aa18.62■□□□□ 0.57
PHGDH-203ENST00000462324 RBM33Q96EV2 1170 aaKnown RBP18.62■□□□□ 0.57
PHGDH-203ENST00000462324 PRAM1Q96QH2 718 aa18.62■□□□□ 0.57
PHGDH-203ENST00000462324 RALGAPBQ86X10 1494 aa18.62■□□□□ 0.57
PHGDH-203ENST00000462324 STRCP1A6NGW2 1772 aa18.62■□□□□ 0.57
PHGDH-203ENST00000462324 TRPM1Q7Z4N2 1603 aa18.61■□□□□ 0.57
PHGDH-203ENST00000462324 DLC1Q96QB1 1528 aa18.61■□□□□ 0.57
PHGDH-203ENST00000462324 MSH6P52701 1360 aa18.6■□□□□ 0.57
PHGDH-203ENST00000462324 EIF3AQ14152 1382 aaKnown RBP18.59■□□□□ 0.57
PHGDH-203ENST00000462324 ZEB1P37275 1124 aaPredicted RBP18.59■□□□□ 0.57
PHGDH-203ENST00000462324 TOM1O60784 492 aa18.58■□□□□ 0.56
PHGDH-203ENST00000462324 ATF3P18847 181 aa18.58■□□□□ 0.56
PHGDH-203ENST00000462324 CADPS2Q86UW7 1296 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms