RNA–Protein interactions for RNA: ENST00000462047.1

PPP2R1A-204, Transcript of protein phosphatase 2 scaffold subunit Aalpha, humanhuman

TSL 2

Gene PPP2R1A, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP2R1A-204ENST00000462047 CHGAP10645 457 aaKnown RBP25.71■■□□□ 1.71
PPP2R1A-204ENST00000462047 PHF23Q9BUL5 403 aaPredicted RBP25.7■■□□□ 1.7
PPP2R1A-204ENST00000462047 NUP155O75694 1391 aa25.69■■□□□ 1.7
PPP2R1A-204ENST00000462047 PPARGC1BQ86YN6 1023 aaKnown RBP25.69■■□□□ 1.7
PPP2R1A-204ENST00000462047 PLEKHG1Q9ULL1 1385 aa25.69■■□□□ 1.7
PPP2R1A-204ENST00000462047 RIMS2Q9UQ26 1411 aa25.68■■□□□ 1.7
PPP2R1A-204ENST00000462047 MED1Q15648 1581 aaPredicted RBP25.68■■□□□ 1.7
PPP2R1A-204ENST00000462047 UNC13BO14795 1591 aa25.67■■□□□ 1.7
PPP2R1A-204ENST00000462047 FAM135BQ49AJ0 1406 aa25.67■■□□□ 1.7
PPP2R1A-204ENST00000462047 TBX22Q9Y458 520 aa25.67■■□□□ 1.7
PPP2R1A-204ENST00000462047 ZFYVE9O95405 1425 aa25.66■■□□□ 1.7
PPP2R1A-204ENST00000462047 GCC2Q8IWJ2 1684 aa25.64■■□□□ 1.7
PPP2R1A-204ENST00000462047 RBM33Q96EV2 1170 aaKnown RBP25.63■■□□□ 1.69
PPP2R1A-204ENST00000462047 NKTRP30414 1462 aaKnown RBP25.63■■□□□ 1.69
PPP2R1A-204ENST00000462047 XIRP1Q702N8 1843 aaKnown RBP25.61■■□□□ 1.69
PPP2R1A-204ENST00000462047 MSH6P52701 1360 aa25.61■■□□□ 1.69
PPP2R1A-204ENST00000462047 TMEM131LA2VDJ0 1609 aa25.6■■□□□ 1.69
PPP2R1A-204ENST00000462047 IQGAP3Q86VI3 1631 aa25.59■■□□□ 1.69
PPP2R1A-204ENST00000462047 SLAIN2Q9P270 581 aa25.58■■□□□ 1.69
PPP2R1A-204ENST00000462047 E9PCH4 1651 aa25.57■■□□□ 1.68
PPP2R1A-204ENST00000462047 NUTM2DQ5VT03 806 aaPredicted RBP25.56■■□□□ 1.68
PPP2R1A-204ENST00000462047 NWD1Q149M9 1564 aa25.56■■□□□ 1.68
PPP2R1A-204ENST00000462047 PIK3R4Q99570 1358 aa25.54■■□□□ 1.68
PPP2R1A-204ENST00000462047 NCOA3Q9Y6Q9 1424 aa25.54■■□□□ 1.68
PPP2R1A-204ENST00000462047 C14orf37Q86TY3 774 aa25.53■■□□□ 1.68
PPP2R1A-204ENST00000462047 MYO5BQ9ULV0 1848 aa25.52■■□□□ 1.68
PPP2R1A-204ENST00000462047 ADAMTS13Q76LX8 1427 aa25.49■■□□□ 1.67
PPP2R1A-204ENST00000462047 CHD2O14647 1828 aaKnown RBP25.49■■□□□ 1.67
PPP2R1A-204ENST00000462047 ZNF326Q5BKZ1 582 aaKnown RBP25.48■■□□□ 1.67
PPP2R1A-204ENST00000462047 C19orf44Q9H6X5 657 aa25.48■■□□□ 1.67
PPP2R1A-204ENST00000462047 CADPS2Q86UW7 1296 aa25.47■■□□□ 1.67
PPP2R1A-204ENST00000462047 RRBP1Q9P2E9 1410 aaKnown RBP25.46■■□□□ 1.67
PPP2R1A-204ENST00000462047 ATF3P18847 181 aa25.46■■□□□ 1.67
PPP2R1A-204ENST00000462047 AMOTL2Q9Y2J4 779 aa25.46■■□□□ 1.67
PPP2R1A-204ENST00000462047 DIP2AQ14689 1571 aa25.45■■□□□ 1.66
PPP2R1A-204ENST00000462047 ROBO1Q9Y6N7 1651 aa25.44■■□□□ 1.66
PPP2R1A-204ENST00000462047 RGS17Q9UGC6 210 aaPredicted RBP25.42■■□□□ 1.66
PPP2R1A-204ENST00000462047 TRPM2O94759 1503 aa25.4■■□□□ 1.66
PPP2R1A-204ENST00000462047 NAIPQ13075 1403 aa25.39■■□□□ 1.66
PPP2R1A-204ENST00000462047 TRIM52Q96A61 297 aa25.39■■□□□ 1.66
PPP2R1A-204ENST00000462047 JCADQ9P266 1359 aa25.38■■□□□ 1.65
PPP2R1A-204ENST00000462047 SPHKAPQ2M3C7 1700 aa25.35■■□□□ 1.65
PPP2R1A-204ENST00000462047 PTPRUQ92729 1446 aa25.34■■□□□ 1.65
PPP2R1A-204ENST00000462047 VGFO15240 615 aaPredicted RBP25.32■■□□□ 1.64
PPP2R1A-204ENST00000462047 SLC4A1APQ9BWU0 796 aaKnown RBP25.32■■□□□ 1.64
PPP2R1A-204ENST00000462047 HFM1A2PYH4 1435 aa25.31■■□□□ 1.64
PPP2R1A-204ENST00000462047 SETBP1Q9Y6X0 1596 aa25.31■■□□□ 1.64
PPP2R1A-204ENST00000462047 PHLPP1O60346 1717 aa25.29■■□□□ 1.64
PPP2R1A-204ENST00000462047 POTEAQ6S8J7 498 aa25.29■■□□□ 1.64
PPP2R1A-204ENST00000462047 METP08581 1390 aa25.29■■□□□ 1.64
PPP2R1A-204ENST00000462047 SPATA31A6Q5VVP1 1343 aa25.28■■□□□ 1.64
PPP2R1A-204ENST00000462047 RPGRIP1LQ68CZ1 1315 aa25.28■■□□□ 1.64
PPP2R1A-204ENST00000462047 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.28■■□□□ 1.64
PPP2R1A-204ENST00000462047 DCCP43146 1447 aa25.28■■□□□ 1.64
PPP2R1A-204ENST00000462047 BRINP3Q76B58 766 aa25.26■■□□□ 1.63
PPP2R1A-204ENST00000462047 CLTCL1P53675 1640 aa25.24■■□□□ 1.63
PPP2R1A-204ENST00000462047 NRXN3Q9Y4C0 1643 aa25.23■■□□□ 1.63
PPP2R1A-204ENST00000462047 NEXMIFQ5QGS0 1516 aa25.22■■□□□ 1.63
PPP2R1A-204ENST00000462047 MEX3CQ5U5Q3 659 aaKnown RBP25.22■■□□□ 1.63
PPP2R1A-204ENST00000462047 COL16A1Q07092 1604 aaPredicted RBP25.21■■□□□ 1.63
PPP2R1A-204ENST00000462047 KIF1BO60333 1816 aa25.2■■□□□ 1.62
PPP2R1A-204ENST00000462047 XRN1Q8IZH2 1706 aaKnown RBP25.2■■□□□ 1.62
PPP2R1A-204ENST00000462047 AHDC1Q5TGY3 1603 aaPredicted RBP25.19■■□□□ 1.62
PPP2R1A-204ENST00000462047 ZNF772Q68DY9 489 aaPredicted RBP25.17■■□□□ 1.62
PPP2R1A-204ENST00000462047 LRRC59Q96AG4 307 aaKnown RBP25.17■■□□□ 1.62
PPP2R1A-204ENST00000462047 MST1RQ04912 1400 aa25.16■■□□□ 1.62
PPP2R1A-204ENST00000462047 ADGRL3Q9HAR2 1447 aa25.16■■□□□ 1.62
PPP2R1A-204ENST00000462047 ACIN1Q9UKV3 1341 aaKnown RBP25.15■■□□□ 1.62
PPP2R1A-204ENST00000462047 FOXD1Q16676 465 aa25.12■■□□□ 1.61
PPP2R1A-204ENST00000462047 ASXL1Q8IXJ9 1541 aa25.12■■□□□ 1.61
PPP2R1A-204ENST00000462047 NUTM2BA6NNL0 878 aaPredicted RBP25.11■■□□□ 1.61
PPP2R1A-204ENST00000462047 NUTM2EB1AL46 878 aaPredicted RBP25.11■■□□□ 1.61
PPP2R1A-204ENST00000462047 NUTM2AQ8IVF1 878 aaPredicted RBP25.11■■□□□ 1.61
PPP2R1A-204ENST00000462047 MPHOSPH9Q99550 1183 aa25.11■■□□□ 1.61
PPP2R1A-204ENST00000462047 SETD5Q9C0A6 1442 aa25.11■■□□□ 1.61
PPP2R1A-204ENST00000462047 PTCH1Q13635 1447 aa25.1■■□□□ 1.61
PPP2R1A-204ENST00000462047 LRP6O75581 1613 aa25.08■■□□□ 1.61
PPP2R1A-204ENST00000462047 CCDC144AA2RUR9 1427 aa25.08■■□□□ 1.61
PPP2R1A-204ENST00000462047 SHPRHQ149N8 1683 aa25.07■■□□□ 1.6
PPP2R1A-204ENST00000462047 ROBO2Q9HCK4 1378 aa25.07■■□□□ 1.6
PPP2R1A-204ENST00000462047 RGL3Q3MIN7 710 aa25.07■■□□□ 1.6
PPP2R1A-204ENST00000462047 C1orf167Q5SNV9 1468 aa25.04■■□□□ 1.6
PPP2R1A-204ENST00000462047 DDX17Q92841 729 aaKnown RBP25.04■■□□□ 1.6
PPP2R1A-204ENST00000462047 ANKRD30BQ9BXX2 1392 aa25.04■■□□□ 1.6
PPP2R1A-204ENST00000462047 PRAG1Q86YV5 1406 aa25.03■■□□□ 1.6
PPP2R1A-204ENST00000462047 RXRBP28702 533 aa25.03■■□□□ 1.6
PPP2R1A-204ENST00000462047 ORAI2Q96SN7 254 aa25.01■■□□□ 1.59
PPP2R1A-204ENST00000462047 ADGRF5Q8IZF2 1346 aa25.01■■□□□ 1.59
PPP2R1A-204ENST00000462047 PPLO60437 1756 aa24.99■■□□□ 1.59
PPP2R1A-204ENST00000462047 NHSL1Q5SYE7 1610 aa24.99■■□□□ 1.59
PPP2R1A-204ENST00000462047 NALCNQ8IZF0 1738 aa24.99■■□□□ 1.59
PPP2R1A-204ENST00000462047 SPATA31E1Q6ZUB1 1445 aa24.98■■□□□ 1.59
PPP2R1A-204ENST00000462047 PNPLA6Q8IY17 1366 aa24.98■■□□□ 1.59
PPP2R1A-204ENST00000462047 AFF2P51816 1311 aa24.98■■□□□ 1.59
PPP2R1A-204ENST00000462047 SOS2Q07890 1332 aaPredicted RBP24.97■■□□□ 1.59
PPP2R1A-204ENST00000462047 STK26Q9P289 416 aa24.97■■□□□ 1.59
PPP2R1A-204ENST00000462047 SETD1AO15047 1707 aaKnown RBP24.97■■□□□ 1.59
PPP2R1A-204ENST00000462047 C8orf37Q96NL8 207 aa24.95■■□□□ 1.58
PPP2R1A-204ENST00000462047 ESCO1Q5FWF5 840 aa24.94■■□□□ 1.58
PPP2R1A-204ENST00000462047 LRPPRCP42704 1394 aaKnown RBP24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms