RNA–Protein interactions for RNA: ENST00000461710.5

CDK5RAP1-207, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 2

Gene CDK5RAP1, Length 2,650 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-207ENST00000461710 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15□□□□□ -0.011e-6■■■■□ 22.1
CDK5RAP1-207ENST00000461710 PLXNC1O60486 1568 aa14.99□□□□□ -0.01
CDK5RAP1-207ENST00000461710 IQGAP1P46940 1657 aa14.99□□□□□ -0.01
CDK5RAP1-207ENST00000461710 AMER1Q5JTC6 1135 aaPredicted RBP14.99□□□□□ -0.01
CDK5RAP1-207ENST00000461710 KNSTRNQ9Y448 316 aa14.99□□□□□ -0.01
CDK5RAP1-207ENST00000461710 SLFN5Q08AF3 891 aa14.98□□□□□ -0.01
CDK5RAP1-207ENST00000461710 SYNMO15061 1565 aa14.97□□□□□ -0.01
CDK5RAP1-207ENST00000461710 VIRMAQ69YN4 1812 aaKnown RBP14.97□□□□□ -0.01
CDK5RAP1-207ENST00000461710 PIK3C2GO75747 1445 aa14.97□□□□□ -0.01
CDK5RAP1-207ENST00000461710 TRMT2AQ8IZ69 625 aaKnown RBP14.97□□□□□ -0.01
CDK5RAP1-207ENST00000461710 EIF3AQ14152 1382 aaKnown RBP14.96□□□□□ -0.01
CDK5RAP1-207ENST00000461710 RGS3P49796 1198 aa14.96□□□□□ -0.02
CDK5RAP1-207ENST00000461710 MADDQ8WXG6 1647 aa14.96□□□□□ -0.02
CDK5RAP1-207ENST00000461710 ASXL1Q8IXJ9 1541 aa14.95□□□□□ -0.02
CDK5RAP1-207ENST00000461710 TTC37Q6PGP7 1564 aa14.94□□□□□ -0.02
CDK5RAP1-207ENST00000461710 ARHGAP5Q13017 1502 aa14.94□□□□□ -0.02
CDK5RAP1-207ENST00000461710 FRAT2O75474 233 aaPredicted RBP14.94□□□□□ -0.02
CDK5RAP1-207ENST00000461710 NKTRP30414 1462 aaKnown RBP14.94□□□□□ -0.02
CDK5RAP1-207ENST00000461710 MYOM1P52179 1685 aa14.94□□□□□ -0.02
CDK5RAP1-207ENST00000461710 ABCC2Q92887 1545 aa14.94□□□□□ -0.02
CDK5RAP1-207ENST00000461710 DUOX2Q9NRD8 1548 aa14.93□□□□□ -0.02
CDK5RAP1-207ENST00000461710 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.93□□□□□ -0.02
CDK5RAP1-207ENST00000461710 SPINK5Q9NQ38 1064 aaPredicted RBP14.92□□□□□ -0.02
CDK5RAP1-207ENST00000461710 NPC1L1Q9UHC9 1359 aa14.92□□□□□ -0.02
CDK5RAP1-207ENST00000461710 ERCC6Q03468 1493 aa14.91□□□□□ -0.02
CDK5RAP1-207ENST00000461710 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.91□□□□□ -0.02
CDK5RAP1-207ENST00000461710 CCDC146Q8IYE0 955 aa14.9□□□□□ -0.02
CDK5RAP1-207ENST00000461710 USP19O94966 1318 aa14.9□□□□□ -0.02
CDK5RAP1-207ENST00000461710 CDCA8Q53HL2 280 aa14.9□□□□□ -0.02
CDK5RAP1-207ENST00000461710 SPHKAPQ2M3C7 1700 aa14.9□□□□□ -0.02
CDK5RAP1-207ENST00000461710 SCAF11Q99590 1463 aaKnown RBP14.9□□□□□ -0.02
CDK5RAP1-207ENST00000461710 BCAR3O75815 825 aa14.89□□□□□ -0.03
CDK5RAP1-207ENST00000461710 APAF1O14727 1248 aa14.89□□□□□ -0.03
CDK5RAP1-207ENST00000461710 IGHDP01880 384 aa14.88□□□□□ -0.03
CDK5RAP1-207ENST00000461710 SCAPERQ9BY12 1400 aa14.88□□□□□ -0.03
CDK5RAP1-207ENST00000461710 E9PSI1 815 aa14.87□□□□□ -0.03
CDK5RAP1-207ENST00000461710 CEP152O94986 1710 aa14.86□□□□□ -0.03
CDK5RAP1-207ENST00000461710 KDM5AP29375 1690 aaKnown RBP14.86□□□□□ -0.03
CDK5RAP1-207ENST00000461710 DMRT2Q9Y5R5 561 aa14.85□□□□□ -0.03
CDK5RAP1-207ENST00000461710 CGNL1Q0VF96 1302 aa14.85□□□□□ -0.03
CDK5RAP1-207ENST00000461710 TRPM2O94759 1503 aa14.85□□□□□ -0.03
CDK5RAP1-207ENST00000461710 PDE3AQ14432 1141 aa14.84□□□□□ -0.03
CDK5RAP1-207ENST00000461710 NLRP1Q9C000 1473 aa14.84□□□□□ -0.03
CDK5RAP1-207ENST00000461710 MAPK8IP3Q9UPT6 1336 aa14.83□□□□□ -0.03
CDK5RAP1-207ENST00000461710 NINLQ9Y2I6 1382 aa14.83□□□□□ -0.03
CDK5RAP1-207ENST00000461710 SEC24BO95487 1268 aa14.83□□□□□ -0.04
CDK5RAP1-207ENST00000461710 NGEFQ8N5V2 710 aa14.83□□□□□ -0.04
CDK5RAP1-207ENST00000461710 CLUAP1Q96AJ1 413 aa14.82□□□□□ -0.04
CDK5RAP1-207ENST00000461710 CLTCL1P53675 1640 aa14.82□□□□□ -0.04
CDK5RAP1-207ENST00000461710 STAC3Q96MF2 364 aa14.82□□□□□ -0.04
CDK5RAP1-207ENST00000461710 FAM43AQ8N2R8 423 aa14.81□□□□□ -0.04
CDK5RAP1-207ENST00000461710 KIAA1210Q9ULL0 1709 aa14.81□□□□□ -0.04
CDK5RAP1-207ENST00000461710 CENPJQ9HC77 1338 aaPredicted RBP14.81□□□□□ -0.04
CDK5RAP1-207ENST00000461710 PTPRTO14522 1441 aa14.8□□□□□ -0.04
CDK5RAP1-207ENST00000461710 BECN1Q14457 450 aa14.79□□□□□ -0.04
CDK5RAP1-207ENST00000461710 PANK1Q8TE04 598 aa14.79□□□□□ -0.04
CDK5RAP1-207ENST00000461710 POGKQ9P215 609 aa14.79□□□□□ -0.04
CDK5RAP1-207ENST00000461710 COG6Q9Y2V7 657 aa14.79□□□□□ -0.04
CDK5RAP1-207ENST00000461710 ERVK-7P63135 1459 aa14.78□□□□□ -0.04
CDK5RAP1-207ENST00000461710 WWC1Q8IX03 1113 aa14.78□□□□□ -0.04
CDK5RAP1-207ENST00000461710 ABCC1P33527 1531 aa14.77□□□□□ -0.04
CDK5RAP1-207ENST00000461710 CARD14Q9BXL6 1004 aa14.77□□□□□ -0.04
CDK5RAP1-207ENST00000461710 CANXP27824 592 aaKnown RBP14.77□□□□□ -0.05
CDK5RAP1-207ENST00000461710 ANTXR1Q9H6X2 564 aa14.77□□□□□ -0.05
CDK5RAP1-207ENST00000461710 PLCH2O75038 1416 aa14.76□□□□□ -0.05
CDK5RAP1-207ENST00000461710 POLR3AO14802 1390 aaPredicted RBP14.76□□□□□ -0.05
CDK5RAP1-207ENST00000461710 SLKQ9H2G2 1235 aaPredicted RBP14.76□□□□□ -0.05
CDK5RAP1-207ENST00000461710 TRAPPC8Q9Y2L5 1435 aa14.76□□□□□ -0.05
CDK5RAP1-207ENST00000461710 ZMYM3Q14202 1370 aa14.75□□□□□ -0.05
CDK5RAP1-207ENST00000461710 SHPRHQ149N8 1683 aa14.75□□□□□ -0.05
CDK5RAP1-207ENST00000461710 DEPDC5O75140 1603 aa14.75□□□□□ -0.05
CDK5RAP1-207ENST00000461710 SHROOM2Q13796 1616 aa14.75□□□□□ -0.05
CDK5RAP1-207ENST00000461710 TET3O43151 1660 aa14.74□□□□□ -0.05
CDK5RAP1-207ENST00000461710 RSPH6AQ9H0K4 717 aa14.74□□□□□ -0.05
CDK5RAP1-207ENST00000461710 NEURL4Q96JN8 1562 aa14.74□□□□□ -0.05
CDK5RAP1-207ENST00000461710 SLC24A1O60721 1099 aa14.73□□□□□ -0.05
CDK5RAP1-207ENST00000461710 AAMPQ13685 434 aa14.73□□□□□ -0.05
CDK5RAP1-207ENST00000461710 TBC1D32Q96NH3 1257 aa14.73□□□□□ -0.05
CDK5RAP1-207ENST00000461710 ABCA6Q8N139 1617 aa14.73□□□□□ -0.05
CDK5RAP1-207ENST00000461710 RARSP54136 660 aaKnown RBP14.73□□□□□ -0.05
CDK5RAP1-207ENST00000461710 PMFBP1Q8TBY8 1022 aa14.73□□□□□ -0.05
CDK5RAP1-207ENST00000461710 MAP3K4Q9Y6R4 1608 aa14.73□□□□□ -0.05
CDK5RAP1-207ENST00000461710 PCDHB15Q9Y5E8 787 aa14.72□□□□□ -0.05
CDK5RAP1-207ENST00000461710 IQSEC2Q5JU85 1478 aa14.72□□□□□ -0.05
CDK5RAP1-207ENST00000461710 EIF5BO60841 1220 aaKnown RBP14.72□□□□□ -0.05
CDK5RAP1-207ENST00000461710 EFCAB2Q5VUJ9 269 aa14.72□□□□□ -0.05
CDK5RAP1-207ENST00000461710 ZFYVE16Q7Z3T8 1539 aa14.71□□□□□ -0.05
CDK5RAP1-207ENST00000461710 RLBP1P12271 317 aa14.71□□□□□ -0.05
CDK5RAP1-207ENST00000461710 UPF2Q9HAU5 1272 aaKnown RBP14.71□□□□□ -0.05
CDK5RAP1-207ENST00000461710 MYOM2P54296 1465 aa14.71□□□□□ -0.05
CDK5RAP1-207ENST00000461710 MYO3AQ8NEV4 1616 aa14.7□□□□□ -0.06
CDK5RAP1-207ENST00000461710 CFAP70Q5T0N1 1121 aa14.7□□□□□ -0.06
CDK5RAP1-207ENST00000461710 TBC1D2Q9BYX2 928 aa14.7□□□□□ -0.06
CDK5RAP1-207ENST00000461710 RTEL1-TNFRSF6BF6WH68 1400 aa14.7□□□□□ -0.06
CDK5RAP1-207ENST00000461710 L1TD1Q5T7N2 865 aaKnown RBP14.7□□□□□ -0.06
CDK5RAP1-207ENST00000461710 UBE2Q2Q8WVN8 375 aa14.7□□□□□ -0.06
CDK5RAP1-207ENST00000461710 PHF23Q9BUL5 403 aaPredicted RBP14.7□□□□□ -0.06
CDK5RAP1-207ENST00000461710 PDZRN3Q9UPQ7 1066 aa14.69□□□□□ -0.06
CDK5RAP1-207ENST00000461710 TNNQ9UQP3 1299 aa14.69□□□□□ -0.06
CDK5RAP1-207ENST00000461710 VWDEQ8N2E2 1590 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms