RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 KCNA6P17658 529 aa22.78■■□□□ 1.24
DNMT3A-207ENST00000461228 PLEKHG1Q9ULL1 1385 aa22.77■■□□□ 1.24
DNMT3A-207ENST00000461228 NCOA3Q9Y6Q9 1424 aa22.77■■□□□ 1.24
DNMT3A-207ENST00000461228 IDI1Q13907 227 aa22.77■■□□□ 1.24
DNMT3A-207ENST00000461228 E9PCH4 1651 aa22.76■■□□□ 1.23
DNMT3A-207ENST00000461228 STAG3Q9UJ98 1225 aa22.74■■□□□ 1.23
DNMT3A-207ENST00000461228 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.73■■□□□ 1.232e-6■□□□□ 9
DNMT3A-207ENST00000461228 PHLPP1O60346 1717 aa22.73■■□□□ 1.23
DNMT3A-207ENST00000461228 ROCK1Q13464 1354 aa22.72■■□□□ 1.23
DNMT3A-207ENST00000461228 COL16A1Q07092 1604 aaPredicted RBP22.71■■□□□ 1.23
DNMT3A-207ENST00000461228 MSH6P52701 1360 aa22.7■■□□□ 1.22
DNMT3A-207ENST00000461228 PIK3R4Q99570 1358 aa22.7■■□□□ 1.22
DNMT3A-207ENST00000461228 AHDC1Q5TGY3 1603 aaPredicted RBP22.68■■□□□ 1.22
DNMT3A-207ENST00000461228 RIMS2Q9UQ26 1411 aa22.67■■□□□ 1.22
DNMT3A-207ENST00000461228 SHPRHQ149N8 1683 aa22.66■■□□□ 1.22
DNMT3A-207ENST00000461228 TRPM2O94759 1503 aa22.66■■□□□ 1.22
DNMT3A-207ENST00000461228 CHIC2Q9UKJ5 165 aa22.64■■□□□ 1.21
DNMT3A-207ENST00000461228 XRN1Q8IZH2 1706 aaKnown RBP22.64■■□□□ 1.21
DNMT3A-207ENST00000461228 SPHKAPQ2M3C7 1700 aa22.63■■□□□ 1.21
DNMT3A-207ENST00000461228 RGS17Q9UGC6 210 aaPredicted RBP22.63■■□□□ 1.21
DNMT3A-207ENST00000461228 DCCP43146 1447 aa22.63■■□□□ 1.21
DNMT3A-207ENST00000461228 ADAMTS13Q76LX8 1427 aa22.63■■□□□ 1.21
DNMT3A-207ENST00000461228 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.62■■□□□ 1.21
DNMT3A-207ENST00000461228 HDGFP51858 240 aaKnown RBP22.62■■□□□ 1.21
DNMT3A-207ENST00000461228 SLC26A8Q96RN1 970 aa22.62■■□□□ 1.21
DNMT3A-207ENST00000461228 SETBP1Q9Y6X0 1596 aa22.62■■□□□ 1.21
DNMT3A-207ENST00000461228 JCADQ9P266 1359 aa22.61■■□□□ 1.21
DNMT3A-207ENST00000461228 NRXN3Q9Y4C0 1643 aa22.6■■□□□ 1.21
DNMT3A-207ENST00000461228 PROSER2Q86WR7 435 aaPredicted RBP22.6■■□□□ 1.21
DNMT3A-207ENST00000461228 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.59■■□□□ 1.21
DNMT3A-207ENST00000461228 TBX22Q9Y458 520 aa22.59■■□□□ 1.21
DNMT3A-207ENST00000461228 SETD1AO15047 1707 aaKnown RBP22.54■■□□□ 1.2
DNMT3A-207ENST00000461228 NHSL1Q5SYE7 1610 aa22.53■■□□□ 1.2
DNMT3A-207ENST00000461228 PPP1R15AO75807 674 aaPredicted RBP22.53■■□□□ 1.2
DNMT3A-207ENST00000461228 FAM50AQ14320 339 aaKnown RBP22.53■■□□□ 1.2
DNMT3A-207ENST00000461228 SLAIN2Q9P270 581 aa22.53■■□□□ 1.2
DNMT3A-207ENST00000461228 SPATA31A6Q5VVP1 1343 aa22.51■■□□□ 1.19
DNMT3A-207ENST00000461228 LRP6O75581 1613 aa22.49■■□□□ 1.19
DNMT3A-207ENST00000461228 CADPS2Q86UW7 1296 aa22.48■■□□□ 1.19
DNMT3A-207ENST00000461228 SENP3Q9H4L4 574 aaPredicted RBP22.48■■□□□ 1.19
DNMT3A-207ENST00000461228 LAMC1P11047 1609 aa22.48■■□□□ 1.19
DNMT3A-207ENST00000461228 PRAG1Q86YV5 1406 aa22.47■■□□□ 1.19
DNMT3A-207ENST00000461228 ASXL1Q8IXJ9 1541 aa22.46■■□□□ 1.19
DNMT3A-207ENST00000461228 POTEAQ6S8J7 498 aa22.45■■□□□ 1.18
DNMT3A-207ENST00000461228 NEXMIFQ5QGS0 1516 aa22.45■■□□□ 1.18
DNMT3A-207ENST00000461228 KIF1BO60333 1816 aa22.44■■□□□ 1.18
DNMT3A-207ENST00000461228 NALCNQ8IZF0 1738 aa22.44■■□□□ 1.18
DNMT3A-207ENST00000461228 BCANQ96GW7 911 aa22.44■■□□□ 1.18
DNMT3A-207ENST00000461228 C19orf44Q9H6X5 657 aa22.44■■□□□ 1.18
DNMT3A-207ENST00000461228 CLTCL1P53675 1640 aa22.43■■□□□ 1.18
DNMT3A-207ENST00000461228 CDK12Q9NYV4 1490 aaPredicted RBP22.43■■□□□ 1.18
DNMT3A-207ENST00000461228 PTPRUQ92729 1446 aa22.43■■□□□ 1.18
DNMT3A-207ENST00000461228 NUP155O75694 1391 aa22.43■■□□□ 1.18
DNMT3A-207ENST00000461228 RBM33Q96EV2 1170 aaKnown RBP22.42■■□□□ 1.18
DNMT3A-207ENST00000461228 SETD5Q9C0A6 1442 aa22.41■■□□□ 1.18
DNMT3A-207ENST00000461228 MST1RQ04912 1400 aa22.4■■□□□ 1.18
DNMT3A-207ENST00000461228 ADGRL3Q9HAR2 1447 aa22.4■■□□□ 1.18
DNMT3A-207ENST00000461228 PTCH1Q13635 1447 aa22.39■■□□□ 1.17
DNMT3A-207ENST00000461228 ATF3P18847 181 aa22.37■■□□□ 1.17
DNMT3A-207ENST00000461228 RRBP1Q9P2E9 1410 aaKnown RBP22.35■■□□□ 1.17
DNMT3A-207ENST00000461228 ZNF772Q68DY9 489 aaPredicted RBP22.34■■□□□ 1.17
DNMT3A-207ENST00000461228 C14orf37Q86TY3 774 aa22.33■■□□□ 1.17
DNMT3A-207ENST00000461228 CHGAP10645 457 aaKnown RBP22.32■■□□□ 1.16
DNMT3A-207ENST00000461228 BRINP3Q76B58 766 aa22.32■■□□□ 1.16
DNMT3A-207ENST00000461228 AMOTL2Q9Y2J4 779 aa22.32■■□□□ 1.16
DNMT3A-207ENST00000461228 PPLO60437 1756 aa22.3■■□□□ 1.16
DNMT3A-207ENST00000461228 METP08581 1390 aa22.28■■□□□ 1.16
DNMT3A-207ENST00000461228 NAIPQ13075 1403 aa22.28■■□□□ 1.16
DNMT3A-207ENST00000461228 COL22A1Q8NFW1 1626 aaPredicted RBP22.28■■□□□ 1.16
DNMT3A-207ENST00000461228 CDC42BPGQ6DT37 1551 aa22.26■■□□□ 1.15
DNMT3A-207ENST00000461228 HFM1A2PYH4 1435 aa22.25■■□□□ 1.15
DNMT3A-207ENST00000461228 MEX3CQ5U5Q3 659 aaKnown RBP22.23■■□□□ 1.15
DNMT3A-207ENST00000461228 NUTM2DQ5VT03 806 aaPredicted RBP22.23■■□□□ 1.15
DNMT3A-207ENST00000461228 PNPLA6Q8IY17 1366 aa22.23■■□□□ 1.15
DNMT3A-207ENST00000461228 KNDC1Q76NI1 1749 aa22.21■■□□□ 1.15
DNMT3A-207ENST00000461228 IFT172Q9UG01 1749 aa22.21■■□□□ 1.15
DNMT3A-207ENST00000461228 C1orf167Q5SNV9 1468 aa22.21■■□□□ 1.15
DNMT3A-207ENST00000461228 LRRC59Q96AG4 307 aaKnown RBP22.19■■□□□ 1.14
DNMT3A-207ENST00000461228 MARF1Q9Y4F3 1742 aaKnown RBP22.17■■□□□ 1.14
DNMT3A-207ENST00000461228 RPGRIP1LQ68CZ1 1315 aa22.16■■□□□ 1.14
DNMT3A-207ENST00000461228 ZNF326Q5BKZ1 582 aaKnown RBP22.16■■□□□ 1.14
DNMT3A-207ENST00000461228 RGS12O14924 1447 aa22.15■■□□□ 1.14
DNMT3A-207ENST00000461228 TECPR2O15040 1411 aa22.14■■□□□ 1.14
DNMT3A-207ENST00000461228 RXRBP28702 533 aa22.14■■□□□ 1.13
DNMT3A-207ENST00000461228 UPF1Q92900 1129 aaKnown RBP eCLIP22.14■■□□□ 1.13
DNMT3A-207ENST00000461228 AFF2P51816 1311 aa22.13■■□□□ 1.13
DNMT3A-207ENST00000461228 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.13■■□□□ 1.13
DNMT3A-207ENST00000461228 EP400Q96L91 3159 aa22.13■■□□□ 1.13
DNMT3A-207ENST00000461228 ROBO2Q9HCK4 1378 aa22.12■■□□□ 1.13
DNMT3A-207ENST00000461228 VGFO15240 615 aaPredicted RBP22.12■■□□□ 1.13
DNMT3A-207ENST00000461228 SOS2Q07890 1332 aaPredicted RBP22.11■■□□□ 1.13
DNMT3A-207ENST00000461228 KIF1AQ12756 1690 aa22.11■■□□□ 1.13
DNMT3A-207ENST00000461228 ITGAEP38570 1179 aa22.1■■□□□ 1.13
DNMT3A-207ENST00000461228 MYOM2P54296 1465 aa22.09■■□□□ 1.13
DNMT3A-207ENST00000461228 PXDNQ92626 1479 aa22.07■■□□□ 1.12
DNMT3A-207ENST00000461228 FMN2Q9NZ56 1722 aa22.06■■□□□ 1.12
DNMT3A-207ENST00000461228 SRCAPQ6ZRS2 3230 aa22.05■■□□□ 1.12
DNMT3A-207ENST00000461228 RBM6P78332 1123 aaKnown RBP22.05■■□□□ 1.12
DNMT3A-207ENST00000461228 TRIM52Q96A61 297 aa22.05■■□□□ 1.12
DNMT3A-207ENST00000461228 SPATA31E1Q6ZUB1 1445 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 145.5 ms