RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 GCC2Q8IWJ2 1684 aa28.18■■■□□ 2.1
COL9A2-205ENST00000461118 NKTRP30414 1462 aaKnown RBP28.17■■■□□ 2.1
COL9A2-205ENST00000461118 RBM33Q96EV2 1170 aaKnown RBP28.16■■■□□ 2.1
COL9A2-205ENST00000461118 ZFYVE9O95405 1425 aa28.15■■■□□ 2.1
COL9A2-205ENST00000461118 RPRD2Q5VT52 1461 aaKnown RBP28.15■■■□□ 2.1
COL9A2-205ENST00000461118 TMEM131LA2VDJ0 1609 aa28.14■■■□□ 2.09
COL9A2-205ENST00000461118 SLC52A1Q9NWF4 448 aa28.13■■■□□ 2.09
COL9A2-205ENST00000461118 PROSER2Q86WR7 435 aaPredicted RBP28.12■■■□□ 2.09
COL9A2-205ENST00000461118 ROCK1Q13464 1354 aa28.11■■■□□ 2.09
COL9A2-205ENST00000461118 ANKRD50Q9ULJ7 1429 aa28.09■■■□□ 2.09
COL9A2-205ENST00000461118 RRBP1Q9P2E9 1410 aaKnown RBP28.09■■■□□ 2.09
COL9A2-205ENST00000461118 UNC13BO14795 1591 aa28.08■■■□□ 2.09
COL9A2-205ENST00000461118 PHLPP1O60346 1717 aa28.08■■■□□ 2.09
COL9A2-205ENST00000461118 POTEAQ6S8J7 498 aa28.06■■■□□ 2.08
COL9A2-205ENST00000461118 PLEKHG1Q9ULL1 1385 aa28.06■■■□□ 2.08
COL9A2-205ENST00000461118 E9PCH4 1651 aa28.06■■■□□ 2.08
COL9A2-205ENST00000461118 RIMS2Q9UQ26 1411 aa28.03■■■□□ 2.08
COL9A2-205ENST00000461118 MSH6P52701 1360 aa28.02■■■□□ 2.08
COL9A2-205ENST00000461118 ITGAEP38570 1179 aa28.01■■■□□ 2.07
COL9A2-205ENST00000461118 COL16A1Q07092 1604 aaPredicted RBP28■■■□□ 2.07
COL9A2-205ENST00000461118 SLAIN2Q9P270 581 aa28■■■□□ 2.07
COL9A2-205ENST00000461118 ADAMTS13Q76LX8 1427 aa27.97■■■□□ 2.07
COL9A2-205ENST00000461118 IQGAP3Q86VI3 1631 aa27.96■■■□□ 2.07
COL9A2-205ENST00000461118 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.96■■■□□ 2.07
COL9A2-205ENST00000461118 BCANQ96GW7 911 aa27.96■■■□□ 2.07
COL9A2-205ENST00000461118 SETD1AO15047 1707 aaKnown RBP27.95■■■□□ 2.07
COL9A2-205ENST00000461118 TBX22Q9Y458 520 aa27.95■■■□□ 2.06
COL9A2-205ENST00000461118 NCOA3Q9Y6Q9 1424 aa27.93■■■□□ 2.06
COL9A2-205ENST00000461118 DIP2AQ14689 1571 aa27.92■■■□□ 2.06
COL9A2-205ENST00000461118 JCADQ9P266 1359 aa27.91■■■□□ 2.06
COL9A2-205ENST00000461118 PPP1R15AO75807 674 aaPredicted RBP27.9■■■□□ 2.06
COL9A2-205ENST00000461118 HDGFP51858 240 aaKnown RBP27.89■■■□□ 2.06
COL9A2-205ENST00000461118 LRP6O75581 1613 aa27.88■■■□□ 2.05
COL9A2-205ENST00000461118 AHDC1Q5TGY3 1603 aaPredicted RBP27.88■■■□□ 2.05
COL9A2-205ENST00000461118 NUTM2DQ5VT03 806 aaPredicted RBP27.86■■■□□ 2.05
COL9A2-205ENST00000461118 SHPRHQ149N8 1683 aa27.86■■■□□ 2.05
COL9A2-205ENST00000461118 PIK3R4Q99570 1358 aa27.86■■■□□ 2.05
COL9A2-205ENST00000461118 NRXN3Q9Y4C0 1643 aa27.85■■■□□ 2.05
COL9A2-205ENST00000461118 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.85■■■□□ 2.05
COL9A2-205ENST00000461118 PTPRUQ92729 1446 aa27.84■■■□□ 2.05
COL9A2-205ENST00000461118 TRPM2O94759 1503 aa27.82■■■□□ 2.04
COL9A2-205ENST00000461118 CHGAP10645 457 aaKnown RBP27.82■■■□□ 2.04
COL9A2-205ENST00000461118 XRN1Q8IZH2 1706 aaKnown RBP27.81■■■□□ 2.04
COL9A2-205ENST00000461118 NAIPQ13075 1403 aa27.8■■■□□ 2.04
COL9A2-205ENST00000461118 SPHKAPQ2M3C7 1700 aa27.79■■■□□ 2.04
COL9A2-205ENST00000461118 NUP155O75694 1391 aa27.79■■■□□ 2.04
COL9A2-205ENST00000461118 C19orf44Q9H6X5 657 aa27.79■■■□□ 2.04
COL9A2-205ENST00000461118 SPATA31A6Q5VVP1 1343 aa27.77■■■□□ 2.04
COL9A2-205ENST00000461118 CADPS2Q86UW7 1296 aa27.77■■■□□ 2.04
COL9A2-205ENST00000461118 SETBP1Q9Y6X0 1596 aa27.76■■■□□ 2.03
COL9A2-205ENST00000461118 HFM1A2PYH4 1435 aa27.75■■■□□ 2.03
COL9A2-205ENST00000461118 C14orf37Q86TY3 774 aa27.74■■■□□ 2.03
COL9A2-205ENST00000461118 AMOTL2Q9Y2J4 779 aa27.74■■■□□ 2.03
COL9A2-205ENST00000461118 NHSL1Q5SYE7 1610 aa27.72■■■□□ 2.03
COL9A2-205ENST00000461118 ATF3P18847 181 aa27.71■■■□□ 2.03
COL9A2-205ENST00000461118 DCCP43146 1447 aa27.7■■■□□ 2.03
COL9A2-205ENST00000461118 BRINP3Q76B58 766 aa27.7■■■□□ 2.02
COL9A2-205ENST00000461118 ASXL1Q8IXJ9 1541 aa27.68■■■□□ 2.02
COL9A2-205ENST00000461118 MST1RQ04912 1400 aa27.67■■■□□ 2.02
COL9A2-205ENST00000461118 NALCNQ8IZF0 1738 aa27.65■■■□□ 2.02
COL9A2-205ENST00000461118 METP08581 1390 aa27.64■■■□□ 2.02
COL9A2-205ENST00000461118 CLTCL1P53675 1640 aa27.64■■■□□ 2.02
COL9A2-205ENST00000461118 ZNF772Q68DY9 489 aaPredicted RBP27.64■■■□□ 2.02
COL9A2-205ENST00000461118 NEXMIFQ5QGS0 1516 aa27.63■■■□□ 2.01
COL9A2-205ENST00000461118 SETD5Q9C0A6 1442 aa27.62■■■□□ 2.01
COL9A2-205ENST00000461118 MEX3CQ5U5Q3 659 aaKnown RBP27.61■■■□□ 2.01
COL9A2-205ENST00000461118 UPF1Q92900 1129 aaKnown RBP eCLIP27.59■■■□□ 2.01
COL9A2-205ENST00000461118 KIF1BO60333 1816 aa27.59■■■□□ 2.01
COL9A2-205ENST00000461118 ADGRL3Q9HAR2 1447 aa27.57■■■□□ 2
COL9A2-205ENST00000461118 TRIM52Q96A61 297 aa27.56■■■□□ 2
COL9A2-205ENST00000461118 CDK12Q9NYV4 1490 aaPredicted RBP27.55■■■□□ 2
COL9A2-205ENST00000461118 LAMC1P11047 1609 aa27.55■■■□□ 2
COL9A2-205ENST00000461118 NUTM2BA6NNL0 878 aaPredicted RBP27.53■■■□□ 2
COL9A2-205ENST00000461118 NUTM2EB1AL46 878 aaPredicted RBP27.53■■■□□ 2
COL9A2-205ENST00000461118 NUTM2AQ8IVF1 878 aaPredicted RBP27.53■■■□□ 2
COL9A2-205ENST00000461118 ZNF326Q5BKZ1 582 aaKnown RBP27.52■■■□□ 2
COL9A2-205ENST00000461118 RXRBP28702 533 aa27.51■■□□□ 1.99
COL9A2-205ENST00000461118 DDX17Q92841 729 aaKnown RBP27.51■■□□□ 1.99
COL9A2-205ENST00000461118 AFF2P51816 1311 aa27.5■■□□□ 1.99
COL9A2-205ENST00000461118 PNPLA6Q8IY17 1366 aa27.49■■□□□ 1.99
COL9A2-205ENST00000461118 ACIN1Q9UKV3 1341 aaKnown RBP27.48■■□□□ 1.99
COL9A2-205ENST00000461118 LRRC59Q96AG4 307 aaKnown RBP27.48■■□□□ 1.99
COL9A2-205ENST00000461118 SLC4A1APQ9BWU0 796 aaKnown RBP27.48■■□□□ 1.99
COL9A2-205ENST00000461118 C1orf167Q5SNV9 1468 aa27.45■■□□□ 1.99
COL9A2-205ENST00000461118 PPLO60437 1756 aa27.44■■□□□ 1.98
COL9A2-205ENST00000461118 PTCH1Q13635 1447 aa27.43■■□□□ 1.98
COL9A2-205ENST00000461118 RGS12O14924 1447 aa27.42■■□□□ 1.98
COL9A2-205ENST00000461118 PRAG1Q86YV5 1406 aa27.42■■□□□ 1.98
COL9A2-205ENST00000461118 ROBO2Q9HCK4 1378 aa27.4■■□□□ 1.98
COL9A2-205ENST00000461118 C8orf37Q96NL8 207 aa27.38■■□□□ 1.97
COL9A2-205ENST00000461118 MPHOSPH9Q99550 1183 aa27.37■■□□□ 1.97
COL9A2-205ENST00000461118 COL22A1Q8NFW1 1626 aaPredicted RBP27.36■■□□□ 1.97
COL9A2-205ENST00000461118 SOS2Q07890 1332 aaPredicted RBP27.36■■□□□ 1.97
COL9A2-205ENST00000461118 ORAI2Q96SN7 254 aa27.35■■□□□ 1.97
COL9A2-205ENST00000461118 QTRT2Q9H974 415 aaKnown RBP27.35■■□□□ 1.97
COL9A2-205ENST00000461118 RBM6P78332 1123 aaKnown RBP27.34■■□□□ 1.97
COL9A2-205ENST00000461118 VGFO15240 615 aaPredicted RBP27.32■■□□□ 1.96
COL9A2-205ENST00000461118 RAB3GAP2Q9H2M9 1393 aa27.32■■□□□ 1.96
COL9A2-205ENST00000461118 FOXD1Q16676 465 aa27.3■■□□□ 1.96
COL9A2-205ENST00000461118 MARF1Q9Y4F3 1742 aaKnown RBP27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms