RNA–Protein interactions for RNA: ENST00000460992.1

PTPN18-206, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 398 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-206ENST00000460992 PPLO60437 1756 aa11.18□□□□□ -0.62
PTPN18-206ENST00000460992 NRXN3Q9Y4C0 1643 aa11.18□□□□□ -0.62
PTPN18-206ENST00000460992 MYT1Q01538 1121 aa11.18□□□□□ -0.62
PTPN18-206ENST00000460992 TMEM2Q9UHN6 1383 aa11.17□□□□□ -0.62
PTPN18-206ENST00000460992 NCKAP5LQ9HCH0 1330 aa11.17□□□□□ -0.62
PTPN18-206ENST00000460992 SLC4A1APQ9BWU0 796 aaKnown RBP11.17□□□□□ -0.62
PTPN18-206ENST00000460992 LTBP4Q8N2S1 1624 aa11.17□□□□□ -0.62
PTPN18-206ENST00000460992 NEUROD1Q13562 356 aa11.16□□□□□ -0.62
PTPN18-206ENST00000460992 PKD2Q13563 968 aa11.16□□□□□ -0.62
PTPN18-206ENST00000460992 IDI1Q13907 227 aa11.16□□□□□ -0.62
PTPN18-206ENST00000460992 RIMS2Q9UQ26 1411 aa11.15□□□□□ -0.62
PTPN18-206ENST00000460992 NWD1Q149M9 1564 aa11.15□□□□□ -0.62
PTPN18-206ENST00000460992 SETD1AO15047 1707 aaKnown RBP11.15□□□□□ -0.63
PTPN18-206ENST00000460992 SLC52A1Q9NWF4 448 aa11.14□□□□□ -0.63
PTPN18-206ENST00000460992 STAG3Q9UJ98 1225 aa11.14□□□□□ -0.63
PTPN18-206ENST00000460992 CCDC144AA2RUR9 1427 aa11.14□□□□□ -0.63
PTPN18-206ENST00000460992 DIP2AQ14689 1571 aa11.14□□□□□ -0.63
PTPN18-206ENST00000460992 DHX57Q6P158 1386 aaKnown RBP11.14□□□□□ -0.63
PTPN18-206ENST00000460992 SETBP1Q9Y6X0 1596 aa11.13□□□□□ -0.63
PTPN18-206ENST00000460992 KCNA4P22459 653 aa11.13□□□□□ -0.63
PTPN18-206ENST00000460992 THEMISQ8N1K5 641 aaPredicted RBP11.13□□□□□ -0.63
PTPN18-206ENST00000460992 CHGAP10645 457 aaKnown RBP11.12□□□□□ -0.63
PTPN18-206ENST00000460992 MPHOSPH9Q99550 1183 aa11.12□□□□□ -0.63
PTPN18-206ENST00000460992 LTKP29376 864 aa11.11□□□□□ -0.63
PTPN18-206ENST00000460992 TIMELESSQ9UNS1 1208 aa11.11□□□□□ -0.63
PTPN18-206ENST00000460992 ZNF335Q9H4Z2 1342 aaPredicted RBP11.1□□□□□ -0.63
PTPN18-206ENST00000460992 SPATA31E1Q6ZUB1 1445 aa11.1□□□□□ -0.63
PTPN18-206ENST00000460992 XRN1Q8IZH2 1706 aaKnown RBP11.1□□□□□ -0.63
PTPN18-206ENST00000460992 XIRP1Q702N8 1843 aaKnown RBP11.1□□□□□ -0.63
PTPN18-206ENST00000460992 ANKLE2Q86XL3 938 aa11.1□□□□□ -0.63
PTPN18-206ENST00000460992 GTF3C3Q9Y5Q9 886 aa11.1□□□□□ -0.63
PTPN18-206ENST00000460992 CPS1P31327 1500 aa11.09□□□□□ -0.63
PTPN18-206ENST00000460992 PLEKHG1Q9ULL1 1385 aa11.09□□□□□ -0.63
PTPN18-206ENST00000460992 ADAMTS13Q76LX8 1427 aa11.09□□□□□ -0.63
PTPN18-206ENST00000460992 CHD2O14647 1828 aaKnown RBP11.08□□□□□ -0.64
PTPN18-206ENST00000460992 TXNDC2Q86VQ3 553 aa11.08□□□□□ -0.64
PTPN18-206ENST00000460992 DMRT2Q9Y5R5 561 aa11.08□□□□□ -0.64
PTPN18-206ENST00000460992 PPP1R15AO75807 674 aaPredicted RBP11.07□□□□□ -0.64
PTPN18-206ENST00000460992 NUTM2DQ5VT03 806 aaPredicted RBP11.07□□□□□ -0.64
PTPN18-206ENST00000460992 ASXL1Q8IXJ9 1541 aa11.07□□□□□ -0.64
PTPN18-206ENST00000460992 LAMC1P11047 1609 aa11.06□□□□□ -0.64
PTPN18-206ENST00000460992 ANKRD30BQ9BXX2 1392 aa11.06□□□□□ -0.64
PTPN18-206ENST00000460992 EID1Q9Y6B2 187 aa11.06□□□□□ -0.64
PTPN18-206ENST00000460992 NKTRP30414 1462 aaKnown RBP11.06□□□□□ -0.64
PTPN18-206ENST00000460992 MYOM2P54296 1465 aa11.06□□□□□ -0.64
PTPN18-206ENST00000460992 IQSEC2Q5JU85 1478 aa11.05□□□□□ -0.64
PTPN18-206ENST00000460992 KNDC1Q76NI1 1749 aa11.04□□□□□ -0.64
PTPN18-206ENST00000460992 ZNF326Q5BKZ1 582 aaKnown RBP11.04□□□□□ -0.64
PTPN18-206ENST00000460992 PPP4R3CPQ6ZMV5 832 aa11.04□□□□□ -0.64
PTPN18-206ENST00000460992 LRRC7Q96NW7 1537 aa11.04□□□□□ -0.64
PTPN18-206ENST00000460992 ALKQ9UM73 1620 aa11.03□□□□□ -0.64
PTPN18-206ENST00000460992 NALCNQ8IZF0 1738 aa11.03□□□□□ -0.64
PTPN18-206ENST00000460992 PIK3C2GO75747 1445 aa11.02□□□□□ -0.64
PTPN18-206ENST00000460992 NCBP3Q53F19 620 aaKnown RBP11.02□□□□□ -0.65
PTPN18-206ENST00000460992 NRXN1Q9ULB1 1477 aa11.01□□□□□ -0.65
PTPN18-206ENST00000460992 MIER1Q8N108 512 aa11.01□□□□□ -0.65
PTPN18-206ENST00000460992 SLC26A8Q96RN1 970 aa11.01□□□□□ -0.65
PTPN18-206ENST00000460992 PTPRUQ92729 1446 aa11.01□□□□□ -0.65
PTPN18-206ENST00000460992 ABCF1Q8NE71 845 aaKnown RBP eCLIP11□□□□□ -0.65
PTPN18-206ENST00000460992 CERKQ8TCT0 537 aa10.99□□□□□ -0.65
PTPN18-206ENST00000460992 BCANQ96GW7 911 aa10.99□□□□□ -0.65
PTPN18-206ENST00000460992 RGL3Q3MIN7 710 aa10.98□□□□□ -0.65
PTPN18-206ENST00000460992 METP08581 1390 aa10.98□□□□□ -0.65
PTPN18-206ENST00000460992 ADGRF5Q8IZF2 1346 aa10.97□□□□□ -0.65
PTPN18-206ENST00000460992 PTCH1Q13635 1447 aa10.97□□□□□ -0.65
PTPN18-206ENST00000460992 ARHGEF28Q8N1W1 1705 aaKnown RBP10.96□□□□□ -0.65
PTPN18-206ENST00000460992 ADGRB1O14514 1584 aa10.96□□□□□ -0.65
PTPN18-206ENST00000460992 PRAG1Q86YV5 1406 aa10.96□□□□□ -0.65
PTPN18-206ENST00000460992 PIK3R4Q99570 1358 aa10.96□□□□□ -0.65
PTPN18-206ENST00000460992 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.95□□□□□ -0.66
PTPN18-206ENST00000460992 KIAA1210Q9ULL0 1709 aa10.95□□□□□ -0.66
PTPN18-206ENST00000460992 TMEM94Q12767 1356 aa10.95□□□□□ -0.66
PTPN18-206ENST00000460992 RPGRIP1LQ68CZ1 1315 aa10.95□□□□□ -0.66
PTPN18-206ENST00000460992 HDGFP51858 240 aaKnown RBP10.95□□□□□ -0.66
PTPN18-206ENST00000460992 TRPM1Q7Z4N2 1603 aa10.94□□□□□ -0.66
PTPN18-206ENST00000460992 ROBO1Q9Y6N7 1651 aa10.93□□□□□ -0.66
PTPN18-206ENST00000460992 KCNA6P17658 529 aa10.93□□□□□ -0.66
PTPN18-206ENST00000460992 CDC42BPGQ6DT37 1551 aa10.92□□□□□ -0.66
PTPN18-206ENST00000460992 VGFO15240 615 aaPredicted RBP10.92□□□□□ -0.66
PTPN18-206ENST00000460992 RBM33Q96EV2 1170 aaKnown RBP10.92□□□□□ -0.66
PTPN18-206ENST00000460992 TBX22Q9Y458 520 aa10.92□□□□□ -0.66
PTPN18-206ENST00000460992 TECPR2O15040 1411 aa10.92□□□□□ -0.66
PTPN18-206ENST00000460992 SLC24A1O60721 1099 aa10.91□□□□□ -0.66
PTPN18-206ENST00000460992 ADGRL3Q9HAR2 1447 aa10.91□□□□□ -0.66
PTPN18-206ENST00000460992 ROBO2Q9HCK4 1378 aa10.9□□□□□ -0.66
PTPN18-206ENST00000460992 ILDR1Q86SU0 546 aaPredicted RBP10.9□□□□□ -0.66
PTPN18-206ENST00000460992 FBXO41Q8TF61 875 aa10.9□□□□□ -0.66
PTPN18-206ENST00000460992 YTHDC2Q9H6S0 1430 aaKnown RBP10.9□□□□□ -0.66
PTPN18-206ENST00000460992 DLC1Q96QB1 1528 aa10.89□□□□□ -0.67
PTPN18-206ENST00000460992 SIN3AQ96ST3 1273 aa10.89□□□□□ -0.67
PTPN18-206ENST00000460992 ADGRB2O60241 1585 aa10.89□□□□□ -0.67
PTPN18-206ENST00000460992 FMN2Q9NZ56 1722 aa10.89□□□□□ -0.67
PTPN18-206ENST00000460992 MSH6P52701 1360 aa10.89□□□□□ -0.67
PTPN18-206ENST00000460992 MSH5O43196 834 aa10.88□□□□□ -0.67
PTPN18-206ENST00000460992 DCCP43146 1447 aa10.88□□□□□ -0.67
PTPN18-206ENST00000460992 YTHDC1Q96MU7 727 aaKnown RBP10.88□□□□□ -0.67
PTPN18-206ENST00000460992 AMOTL2Q9Y2J4 779 aa10.88□□□□□ -0.67
PTPN18-206ENST00000460992 QRICH2Q9H0J4 1663 aa10.88□□□□□ -0.67
PTPN18-206ENST00000460992 LRPPRCP42704 1394 aaKnown RBP10.88□□□□□ -0.67
PTPN18-206ENST00000460992 UBAP1LF5GYI3 381 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms