RNA–Protein interactions for RNA: ENST00000460841.1

C4A-245, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 3

Gene C4A, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-245ENST00000460841 MYO5BQ9ULV0 1848 aa23.82■■□□□ 1.4
C4A-245ENST00000460841 BCANQ96GW7 911 aa23.8■■□□□ 1.4
C4A-245ENST00000460841 TMEM131LA2VDJ0 1609 aa23.79■■□□□ 1.4
C4A-245ENST00000460841 ALKQ9UM73 1620 aa23.77■■□□□ 1.4
C4A-245ENST00000460841 NAIPQ13075 1403 aa23.77■■□□□ 1.4
C4A-245ENST00000460841 ZFYVE9O95405 1425 aa23.76■■□□□ 1.39
C4A-245ENST00000460841 RIMS2Q9UQ26 1411 aa23.76■■□□□ 1.39
C4A-245ENST00000460841 NUTM2DQ5VT03 806 aaPredicted RBP23.76■■□□□ 1.39
C4A-245ENST00000460841 KCNA6P17658 529 aa23.75■■□□□ 1.39
C4A-245ENST00000460841 PPP1R15AO75807 674 aaPredicted RBP23.74■■□□□ 1.39
C4A-245ENST00000460841 HDGFP51858 240 aaKnown RBP23.74■■□□□ 1.39
C4A-245ENST00000460841 RBM33Q96EV2 1170 aaKnown RBP23.72■■□□□ 1.39
C4A-245ENST00000460841 PLEKHG1Q9ULL1 1385 aa23.71■■□□□ 1.39
C4A-245ENST00000460841 XIRP1Q702N8 1843 aaKnown RBP23.7■■□□□ 1.39
C4A-245ENST00000460841 MED1Q15648 1581 aaPredicted RBP23.7■■□□□ 1.38
C4A-245ENST00000460841 PROSER2Q86WR7 435 aaPredicted RBP23.69■■□□□ 1.38
C4A-245ENST00000460841 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.69■■□□□ 1.38
C4A-245ENST00000460841 TMEM94Q12767 1356 aa23.68■■□□□ 1.38
C4A-245ENST00000460841 TRIM52Q96A61 297 aa23.68■■□□□ 1.38
C4A-245ENST00000460841 PHF23Q9BUL5 403 aaPredicted RBP23.68■■□□□ 1.38
C4A-245ENST00000460841 HFM1A2PYH4 1435 aa23.67■■□□□ 1.38
C4A-245ENST00000460841 SPHKAPQ2M3C7 1700 aa23.65■■□□□ 1.38
C4A-245ENST00000460841 TBX22Q9Y458 520 aa23.65■■□□□ 1.38
C4A-245ENST00000460841 NWD1Q149M9 1564 aa23.61■■□□□ 1.37
C4A-245ENST00000460841 ADAMTS13Q76LX8 1427 aa23.61■■□□□ 1.37
C4A-245ENST00000460841 ZNF326Q5BKZ1 582 aaKnown RBP23.6■■□□□ 1.37
C4A-245ENST00000460841 CHD2O14647 1828 aaKnown RBP23.6■■□□□ 1.37
C4A-245ENST00000460841 NKTRP30414 1462 aaKnown RBP23.59■■□□□ 1.37
C4A-245ENST00000460841 SLC4A1APQ9BWU0 796 aaKnown RBP23.58■■□□□ 1.37
C4A-245ENST00000460841 CLTCL1P53675 1640 aa23.57■■□□□ 1.36
C4A-245ENST00000460841 TRPM2O94759 1503 aa23.55■■□□□ 1.36
C4A-245ENST00000460841 FOXD1Q16676 465 aa23.53■■□□□ 1.36
C4A-245ENST00000460841 MSH6P52701 1360 aa23.52■■□□□ 1.36
C4A-245ENST00000460841 FAM135BQ49AJ0 1406 aa23.51■■□□□ 1.35
C4A-245ENST00000460841 AMOTL2Q9Y2J4 779 aa23.51■■□□□ 1.35
C4A-245ENST00000460841 DIP2AQ14689 1571 aa23.51■■□□□ 1.35
C4A-245ENST00000460841 PIK3R4Q99570 1358 aa23.51■■□□□ 1.35
C4A-245ENST00000460841 PTPRUQ92729 1446 aa23.5■■□□□ 1.35
C4A-245ENST00000460841 NRXN3Q9Y4C0 1643 aa23.48■■□□□ 1.35
C4A-245ENST00000460841 KIF1BO60333 1816 aa23.48■■□□□ 1.35
C4A-245ENST00000460841 C14orf37Q86TY3 774 aa23.48■■□□□ 1.35
C4A-245ENST00000460841 SLAIN2Q9P270 581 aa23.48■■□□□ 1.35
C4A-245ENST00000460841 NEXMIFQ5QGS0 1516 aa23.47■■□□□ 1.35
C4A-245ENST00000460841 SETBP1Q9Y6X0 1596 aa23.46■■□□□ 1.35
C4A-245ENST00000460841 METP08581 1390 aa23.45■■□□□ 1.34
C4A-245ENST00000460841 MPHOSPH9Q99550 1183 aa23.45■■□□□ 1.34
C4A-245ENST00000460841 ROBO1Q9Y6N7 1651 aa23.44■■□□□ 1.34
C4A-245ENST00000460841 NCOA3Q9Y6Q9 1424 aa23.43■■□□□ 1.34
C4A-245ENST00000460841 RGS17Q9UGC6 210 aaPredicted RBP23.43■■□□□ 1.34
C4A-245ENST00000460841 C19orf44Q9H6X5 657 aa23.42■■□□□ 1.34
C4A-245ENST00000460841 VGFO15240 615 aaPredicted RBP23.4■■□□□ 1.34
C4A-245ENST00000460841 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.39■■□□□ 1.33
C4A-245ENST00000460841 RPGRIP1LQ68CZ1 1315 aa23.38■■□□□ 1.33
C4A-245ENST00000460841 ATF3P18847 181 aa23.38■■□□□ 1.33
C4A-245ENST00000460841 SETD5Q9C0A6 1442 aa23.38■■□□□ 1.33
C4A-245ENST00000460841 XRN1Q8IZH2 1706 aaKnown RBP23.37■■□□□ 1.33
C4A-245ENST00000460841 CADPS2Q86UW7 1296 aa23.37■■□□□ 1.33
C4A-245ENST00000460841 RGL3Q3MIN7 710 aa23.35■■□□□ 1.33
C4A-245ENST00000460841 CCDC144AA2RUR9 1427 aa23.34■■□□□ 1.33
C4A-245ENST00000460841 PPLO60437 1756 aa23.32■■□□□ 1.32
C4A-245ENST00000460841 RAB3GAP2Q9H2M9 1393 aa23.3■■□□□ 1.32
C4A-245ENST00000460841 POTEAQ6S8J7 498 aa23.3■■□□□ 1.32
C4A-245ENST00000460841 PHLPP1O60346 1717 aa23.3■■□□□ 1.32
C4A-245ENST00000460841 ADGRF5Q8IZF2 1346 aa23.3■■□□□ 1.32
C4A-245ENST00000460841 SPATA31E1Q6ZUB1 1445 aa23.29■■□□□ 1.32
C4A-245ENST00000460841 SETD1AO15047 1707 aaKnown RBP23.28■■□□□ 1.32
C4A-245ENST00000460841 BRINP3Q76B58 766 aa23.27■■□□□ 1.32
C4A-245ENST00000460841 ACIN1Q9UKV3 1341 aaKnown RBP23.27■■□□□ 1.32
C4A-245ENST00000460841 DCCP43146 1447 aa23.25■■□□□ 1.31
C4A-245ENST00000460841 ROBO2Q9HCK4 1378 aa23.25■■□□□ 1.31
C4A-245ENST00000460841 MST1RQ04912 1400 aa23.24■■□□□ 1.31
C4A-245ENST00000460841 ADGRL3Q9HAR2 1447 aa23.24■■□□□ 1.31
C4A-245ENST00000460841 JCADQ9P266 1359 aa23.23■■□□□ 1.31
C4A-245ENST00000460841 COL16A1Q07092 1604 aaPredicted RBP23.22■■□□□ 1.31
C4A-245ENST00000460841 ANKRD30BQ9BXX2 1392 aa23.21■■□□□ 1.31
C4A-245ENST00000460841 NALCNQ8IZF0 1738 aa23.21■■□□□ 1.31
C4A-245ENST00000460841 PTCH1Q13635 1447 aa23.2■■□□□ 1.3
C4A-245ENST00000460841 AHDC1Q5TGY3 1603 aaPredicted RBP23.19■■□□□ 1.3
C4A-245ENST00000460841 IFT172Q9UG01 1749 aa23.19■■□□□ 1.3
C4A-245ENST00000460841 TMEM132EQ6IEE7 984 aa23.18■■□□□ 1.3
C4A-245ENST00000460841 STK26Q9P289 416 aa23.18■■□□□ 1.3
C4A-245ENST00000460841 DDX17Q92841 729 aaKnown RBP23.17■■□□□ 1.3
C4A-245ENST00000460841 ASXL1Q8IXJ9 1541 aa23.17■■□□□ 1.3
C4A-245ENST00000460841 PRAG1Q86YV5 1406 aa23.16■■□□□ 1.3
C4A-245ENST00000460841 C1orf167Q5SNV9 1468 aa23.13■■□□□ 1.29
C4A-245ENST00000460841 MEX3CQ5U5Q3 659 aaKnown RBP23.13■■□□□ 1.29
C4A-245ENST00000460841 WAPLQ7Z5K2 1190 aa23.13■■□□□ 1.29
C4A-245ENST00000460841 PIK3C2GO75747 1445 aa23.13■■□□□ 1.29
C4A-245ENST00000460841 SPATA31A6Q5VVP1 1343 aa23.12■■□□□ 1.29
C4A-245ENST00000460841 ORAI2Q96SN7 254 aa23.11■■□□□ 1.29
C4A-245ENST00000460841 LRPPRCP42704 1394 aaKnown RBP23.11■■□□□ 1.29
C4A-245ENST00000460841 HRCP23327 699 aa23.1■■□□□ 1.29
C4A-245ENST00000460841 LRP6O75581 1613 aa23.1■■□□□ 1.29
C4A-245ENST00000460841 CFAP70Q5T0N1 1121 aa23.09■■□□□ 1.29
C4A-245ENST00000460841 C14orf93Q9H972 538 aaKnown RBP23.09■■□□□ 1.29
C4A-245ENST00000460841 NHSL1Q5SYE7 1610 aa23.08■■□□□ 1.29
C4A-245ENST00000460841 NUTM2BA6NNL0 878 aaPredicted RBP23.08■■□□□ 1.29
C4A-245ENST00000460841 NUTM2EB1AL46 878 aaPredicted RBP23.08■■□□□ 1.29
C4A-245ENST00000460841 NUTM2AQ8IVF1 878 aaPredicted RBP23.08■■□□□ 1.29
C4A-245ENST00000460841 ABCC11Q96J66 1382 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms