RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 FGD6Q6ZV73 1430 aa21.28■■□□□ 1
SCAMP4-206ENST00000460767 ZFYVE9O95405 1425 aa21.26■□□□□ 0.99
SCAMP4-206ENST00000460767 SLC52A1Q9NWF4 448 aa21.25■□□□□ 0.99
SCAMP4-206ENST00000460767 PLEKHG1Q9ULL1 1385 aa21.24■□□□□ 0.99
SCAMP4-206ENST00000460767 SLC26A8Q96RN1 970 aa21.24■□□□□ 0.99
SCAMP4-206ENST00000460767 RRP7BPQ9NSQ0 103 aa21.24■□□□□ 0.99
SCAMP4-206ENST00000460767 ANKRD30AQ9BXX3 1397 aa21.23■□□□□ 0.99
SCAMP4-206ENST00000460767 AHDC1Q5TGY3 1603 aaPredicted RBP21.23■□□□□ 0.99
SCAMP4-206ENST00000460767 SHPRHQ149N8 1683 aa21.23■□□□□ 0.99
SCAMP4-206ENST00000460767 ADGRL2O95490 1459 aa21.22■□□□□ 0.99
SCAMP4-206ENST00000460767 SLAIN2Q9P270 581 aa21.22■□□□□ 0.99
SCAMP4-206ENST00000460767 SPATA31A6Q5VVP1 1343 aa21.22■□□□□ 0.99
SCAMP4-206ENST00000460767 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.21■□□□□ 0.99
SCAMP4-206ENST00000460767 LRP6O75581 1613 aa21.21■□□□□ 0.99
SCAMP4-206ENST00000460767 DIP2AQ14689 1571 aa21.2■□□□□ 0.98
SCAMP4-206ENST00000460767 GCC2Q8IWJ2 1684 aa21.2■□□□□ 0.98
SCAMP4-206ENST00000460767 TMEM131LA2VDJ0 1609 aa21.19■□□□□ 0.98
SCAMP4-206ENST00000460767 MYO5BQ9ULV0 1848 aa21.19■□□□□ 0.98
SCAMP4-206ENST00000460767 RBM33Q96EV2 1170 aaKnown RBP21.17■□□□□ 0.98
SCAMP4-206ENST00000460767 CDK12Q9NYV4 1490 aaPredicted RBP21.15■□□□□ 0.98
SCAMP4-206ENST00000460767 PIK3R4Q99570 1358 aa21.15■□□□□ 0.98
SCAMP4-206ENST00000460767 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.15■□□□□ 0.98
SCAMP4-206ENST00000460767 RIMS2Q9UQ26 1411 aa21.14■□□□□ 0.98
SCAMP4-206ENST00000460767 ZNF772Q68DY9 489 aaPredicted RBP21.14■□□□□ 0.97
SCAMP4-206ENST00000460767 TBX22Q9Y458 520 aa21.13■□□□□ 0.97
SCAMP4-206ENST00000460767 HDGFP51858 240 aaKnown RBP21.12■□□□□ 0.97
SCAMP4-206ENST00000460767 ADAMTS13Q76LX8 1427 aa21.12■□□□□ 0.97
SCAMP4-206ENST00000460767 UPF1Q92900 1129 aaKnown RBP eCLIP21.11■□□□□ 0.97
SCAMP4-206ENST00000460767 UNC13BO14795 1591 aa21.1■□□□□ 0.97
SCAMP4-206ENST00000460767 DCCP43146 1447 aa21.1■□□□□ 0.97
SCAMP4-206ENST00000460767 CADPS2Q86UW7 1296 aa21.09■□□□□ 0.97
SCAMP4-206ENST00000460767 ANKRD50Q9ULJ7 1429 aa21.09■□□□□ 0.97
SCAMP4-206ENST00000460767 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.07■□□□□ 0.96
SCAMP4-206ENST00000460767 TRPM2O94759 1503 aa21.07■□□□□ 0.96
SCAMP4-206ENST00000460767 BCANQ96GW7 911 aa21.06■□□□□ 0.96
SCAMP4-206ENST00000460767 C19orf44Q9H6X5 657 aa21.06■□□□□ 0.96
SCAMP4-206ENST00000460767 PPP1R15AO75807 674 aaPredicted RBP21.05■□□□□ 0.96
SCAMP4-206ENST00000460767 NHSL1Q5SYE7 1610 aa21.04■□□□□ 0.96
SCAMP4-206ENST00000460767 E9PCH4 1651 aa21.04■□□□□ 0.96
SCAMP4-206ENST00000460767 MEX3CQ5U5Q3 659 aaKnown RBP21.03■□□□□ 0.96
SCAMP4-206ENST00000460767 CHIC2Q9UKJ5 165 aa21.03■□□□□ 0.96
SCAMP4-206ENST00000460767 XRN1Q8IZH2 1706 aaKnown RBP21.03■□□□□ 0.96
SCAMP4-206ENST00000460767 SETD5Q9C0A6 1442 aa21.03■□□□□ 0.96
SCAMP4-206ENST00000460767 ASXL1Q8IXJ9 1541 aa21.02■□□□□ 0.96
SCAMP4-206ENST00000460767 RRBP1Q9P2E9 1410 aaKnown RBP21.01■□□□□ 0.95
SCAMP4-206ENST00000460767 IQGAP3Q86VI3 1631 aa21■□□□□ 0.95
SCAMP4-206ENST00000460767 ATF3P18847 181 aa21■□□□□ 0.95
SCAMP4-206ENST00000460767 RXRBP28702 533 aa20.99■□□□□ 0.95
SCAMP4-206ENST00000460767 BRINP3Q76B58 766 aa20.99■□□□□ 0.95
SCAMP4-206ENST00000460767 SETBP1Q9Y6X0 1596 aa20.98■□□□□ 0.95
SCAMP4-206ENST00000460767 NRXN3Q9Y4C0 1643 aa20.98■□□□□ 0.95
SCAMP4-206ENST00000460767 TRIM52Q96A61 297 aa20.98■□□□□ 0.95
SCAMP4-206ENST00000460767 PTPRUQ92729 1446 aa20.97■□□□□ 0.95
SCAMP4-206ENST00000460767 C14orf37Q86TY3 774 aa20.97■□□□□ 0.95
SCAMP4-206ENST00000460767 MST1RQ04912 1400 aa20.95■□□□□ 0.95
SCAMP4-206ENST00000460767 PPARGC1BQ86YN6 1023 aaKnown RBP20.94■□□□□ 0.94
SCAMP4-206ENST00000460767 LAMC1P11047 1609 aa20.93■□□□□ 0.94
SCAMP4-206ENST00000460767 RGS12O14924 1447 aa20.93■□□□□ 0.94
SCAMP4-206ENST00000460767 AFF2P51816 1311 aa20.91■□□□□ 0.94
SCAMP4-206ENST00000460767 ROCK1Q13464 1354 aa20.91■□□□□ 0.94
SCAMP4-206ENST00000460767 AMOTL2Q9Y2J4 779 aa20.91■□□□□ 0.94
SCAMP4-206ENST00000460767 FAM50AQ14320 339 aaKnown RBP20.9■□□□□ 0.94
SCAMP4-206ENST00000460767 ADGRL3Q9HAR2 1447 aa20.88■□□□□ 0.93
SCAMP4-206ENST00000460767 PNPLA6Q8IY17 1366 aa20.88■□□□□ 0.93
SCAMP4-206ENST00000460767 LRRC59Q96AG4 307 aaKnown RBP20.88■□□□□ 0.93
SCAMP4-206ENST00000460767 NALCNQ8IZF0 1738 aa20.87■□□□□ 0.93
SCAMP4-206ENST00000460767 CHGAP10645 457 aaKnown RBP20.86■□□□□ 0.93
SCAMP4-206ENST00000460767 RBM6P78332 1123 aaKnown RBP20.86■□□□□ 0.93
SCAMP4-206ENST00000460767 SPHKAPQ2M3C7 1700 aa20.86■□□□□ 0.93
SCAMP4-206ENST00000460767 NUTM2BA6NNL0 878 aaPredicted RBP20.84■□□□□ 0.93
SCAMP4-206ENST00000460767 NUTM2EB1AL46 878 aaPredicted RBP20.84■□□□□ 0.93
SCAMP4-206ENST00000460767 NUTM2DQ5VT03 806 aaPredicted RBP20.84■□□□□ 0.93
SCAMP4-206ENST00000460767 NUTM2AQ8IVF1 878 aaPredicted RBP20.84■□□□□ 0.93
SCAMP4-206ENST00000460767 PRAG1Q86YV5 1406 aa20.82■□□□□ 0.92
SCAMP4-206ENST00000460767 METP08581 1390 aa20.8■□□□□ 0.92
SCAMP4-206ENST00000460767 PTCH1Q13635 1447 aa20.79■□□□□ 0.92
SCAMP4-206ENST00000460767 NEXMIFQ5QGS0 1516 aa20.79■□□□□ 0.92
SCAMP4-206ENST00000460767 COL22A1Q8NFW1 1626 aaPredicted RBP20.79■□□□□ 0.92
SCAMP4-206ENST00000460767 QTRT2Q9H974 415 aaKnown RBP20.79■□□□□ 0.92
SCAMP4-206ENST00000460767 ATAD2Q6PL18 1390 aa20.79■□□□□ 0.92
SCAMP4-206ENST00000460767 C8orf37Q96NL8 207 aa20.78■□□□□ 0.92
SCAMP4-206ENST00000460767 C1orf167Q5SNV9 1468 aa20.77■□□□□ 0.92
SCAMP4-206ENST00000460767 NUP155O75694 1391 aa20.77■□□□□ 0.92
SCAMP4-206ENST00000460767 NGLY1Q96IV0 654 aa20.77■□□□□ 0.92
SCAMP4-206ENST00000460767 SOS2Q07890 1332 aaPredicted RBP20.75■□□□□ 0.91
SCAMP4-206ENST00000460767 ATRNO75882 1429 aa20.72■□□□□ 0.91
SCAMP4-206ENST00000460767 CLTCL1P53675 1640 aa20.72■□□□□ 0.91
SCAMP4-206ENST00000460767 NAIPQ13075 1403 aa20.71■□□□□ 0.91
SCAMP4-206ENST00000460767 FOXD1Q16676 465 aa20.71■□□□□ 0.91
SCAMP4-206ENST00000460767 FNBP4Q8N3X1 1017 aaPredicted RBP20.7■□□□□ 0.9
SCAMP4-206ENST00000460767 TRPC5Q9UL62 973 aaPredicted RBP20.7■□□□□ 0.9
SCAMP4-206ENST00000460767 DDX17Q92841 729 aaKnown RBP20.69■□□□□ 0.9
SCAMP4-206ENST00000460767 MARF1Q9Y4F3 1742 aaKnown RBP20.69■□□□□ 0.9
SCAMP4-206ENST00000460767 HFM1A2PYH4 1435 aa20.69■□□□□ 0.9
SCAMP4-206ENST00000460767 MYOM2P54296 1465 aa20.69■□□□□ 0.9
SCAMP4-206ENST00000460767 KIF1BO60333 1816 aa20.68■□□□□ 0.9
SCAMP4-206ENST00000460767 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.67■□□□□ 0.9
SCAMP4-206ENST00000460767 USP21Q9UK80 565 aa20.66■□□□□ 0.9
SCAMP4-206ENST00000460767 CDC42BPGQ6DT37 1551 aa20.66■□□□□ 0.9
SCAMP4-206ENST00000460767 ADAMTS2O95450 1211 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms