RNA–Protein interactions for RNA: ENST00000460430.5

CDHR4-203, Transcript of cadherin related family member 4, humanhuman

TSL 3

Gene CDHR4, Length 665 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-203ENST00000460430 MYOM2P54296 1465 aa15.36■□□□□ 0.05
CDHR4-203ENST00000460430 TMEM2Q9UHN6 1383 aa15.36■□□□□ 0.05
CDHR4-203ENST00000460430 PPP1R15AO75807 674 aaPredicted RBP15.35■□□□□ 0.05
CDHR4-203ENST00000460430 THEMISQ8N1K5 641 aaPredicted RBP15.35■□□□□ 0.05
CDHR4-203ENST00000460430 KDM2AQ9Y2K7 1162 aa15.35■□□□□ 0.05
CDHR4-203ENST00000460430 SLIT1O75093 1534 aa15.34■□□□□ 0.05
CDHR4-203ENST00000460430 ZFYVE9O95405 1425 aa15.33■□□□□ 0.04
CDHR4-203ENST00000460430 ARHGAP23Q9P227 1491 aa15.33■□□□□ 0.04
CDHR4-203ENST00000460430 HDGFP51858 240 aaKnown RBP15.32■□□□□ 0.04
CDHR4-203ENST00000460430 NUTM2DQ5VT03 806 aaPredicted RBP15.32■□□□□ 0.04
CDHR4-203ENST00000460430 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.32■□□□□ 0.04
CDHR4-203ENST00000460430 EID1Q9Y6B2 187 aa15.32■□□□□ 0.04
CDHR4-203ENST00000460430 LMTK3Q96Q04 1460 aa15.32■□□□□ 0.04
CDHR4-203ENST00000460430 VGFO15240 615 aaPredicted RBP15.31■□□□□ 0.04
CDHR4-203ENST00000460430 STAC3Q96MF2 364 aa15.31■□□□□ 0.04
CDHR4-203ENST00000460430 SCAF11Q99590 1463 aaKnown RBP15.31■□□□□ 0.04
CDHR4-203ENST00000460430 PRAG1Q86YV5 1406 aa15.3■□□□□ 0.04
CDHR4-203ENST00000460430 NRXN1Q9ULB1 1477 aa15.28■□□□□ 0.04
CDHR4-203ENST00000460430 PIK3C2GO75747 1445 aa15.28■□□□□ 0.04
CDHR4-203ENST00000460430 ADGRF5Q8IZF2 1346 aa15.28■□□□□ 0.04
CDHR4-203ENST00000460430 TXNDC2Q86VQ3 553 aa15.28■□□□□ 0.04
CDHR4-203ENST00000460430 POLR1AO95602 1720 aaPredicted RBP15.27■□□□□ 0.04
CDHR4-203ENST00000460430 BCANQ96GW7 911 aa15.27■□□□□ 0.04
CDHR4-203ENST00000460430 LAMC1P11047 1609 aa15.26■□□□□ 0.03
CDHR4-203ENST00000460430 ANKLE2Q86XL3 938 aa15.26■□□□□ 0.03
CDHR4-203ENST00000460430 SENP3Q9H4L4 574 aaPredicted RBP15.26■□□□□ 0.03
CDHR4-203ENST00000460430 PLEKHG1Q9ULL1 1385 aa15.25■□□□□ 0.03
CDHR4-203ENST00000460430 HSPA2P54652 639 aa15.25■□□□□ 0.03
CDHR4-203ENST00000460430 AEBP2Q6ZN18 517 aaPredicted RBP15.25■□□□□ 0.03
CDHR4-203ENST00000460430 RALGAPBQ86X10 1494 aa15.25■□□□□ 0.03
CDHR4-203ENST00000460430 SETBP1Q9Y6X0 1596 aa15.24■□□□□ 0.03
CDHR4-203ENST00000460430 LTKP29376 864 aa15.24■□□□□ 0.03
CDHR4-203ENST00000460430 NBPF8Q3BBV2 869 aa15.24■□□□□ 0.03
CDHR4-203ENST00000460430 IQGAP1P46940 1657 aa15.24■□□□□ 0.03
CDHR4-203ENST00000460430 TRPM1Q7Z4N2 1603 aa15.24■□□□□ 0.03
CDHR4-203ENST00000460430 ROCK2O75116 1388 aaKnown RBP15.24■□□□□ 0.03
CDHR4-203ENST00000460430 NPHP4O75161 1426 aaPredicted RBP15.22■□□□□ 0.03
CDHR4-203ENST00000460430 KIAA1210Q9ULL0 1709 aa15.22■□□□□ 0.03
CDHR4-203ENST00000460430 NRXN3Q9Y4C0 1643 aa15.21■□□□□ 0.03
CDHR4-203ENST00000460430 DIP2AQ14689 1571 aa15.21■□□□□ 0.03
CDHR4-203ENST00000460430 NCKAP5LQ9HCH0 1330 aa15.2■□□□□ 0.02
CDHR4-203ENST00000460430 ALKQ9UM73 1620 aa15.2■□□□□ 0.02
CDHR4-203ENST00000460430 CFAP70Q5T0N1 1121 aa15.19■□□□□ 0.02
CDHR4-203ENST00000460430 MED14O60244 1454 aa15.19■□□□□ 0.02
CDHR4-203ENST00000460430 C14orf93Q9H972 538 aaKnown RBP15.18■□□□□ 0.02
CDHR4-203ENST00000460430 ADAMTS13Q76LX8 1427 aa15.17■□□□□ 0.02
CDHR4-203ENST00000460430 SETD1AO15047 1707 aaKnown RBP15.17■□□□□ 0.02
CDHR4-203ENST00000460430 SLC26A8Q96RN1 970 aa15.16■□□□□ 0.02
CDHR4-203ENST00000460430 CARD11Q9BXL7 1154 aa15.16■□□□□ 0.02
CDHR4-203ENST00000460430 ASXL1Q8IXJ9 1541 aa15.16■□□□□ 0.02
CDHR4-203ENST00000460430 ADGRB1O14514 1584 aa15.15■□□□□ 0.02
CDHR4-203ENST00000460430 GPRASP1Q5JY77 1395 aa15.15■□□□□ 0.02
CDHR4-203ENST00000460430 NBPF1Q3BBV0 1214 aa15.15■□□□□ 0.02
CDHR4-203ENST00000460430 STRCQ7RTU9 1775 aa15.14■□□□□ 0.01
CDHR4-203ENST00000460430 METP08581 1390 aa15.13■□□□□ 0.01
CDHR4-203ENST00000460430 EIF3AQ14152 1382 aaKnown RBP15.13■□□□□ 0.01
CDHR4-203ENST00000460430 TMEM132EQ6IEE7 984 aa15.13■□□□□ 0.01
CDHR4-203ENST00000460430 TBX22Q9Y458 520 aa15.12■□□□□ 0.01
CDHR4-203ENST00000460430 USP47Q96K76 1375 aa15.11■□□□□ 0.01
CDHR4-203ENST00000460430 YTHDC2Q9H6S0 1430 aaKnown RBP15.11■□□□□ 0.01
CDHR4-203ENST00000460430 STK26Q9P289 416 aa15.1■□□□□ 0.01
CDHR4-203ENST00000460430 LRPPRCP42704 1394 aaKnown RBP15.1■□□□□ 0.01
CDHR4-203ENST00000460430 PIK3R4Q99570 1358 aa15.1■□□□□ 0.01
CDHR4-203ENST00000460430 DMRT2Q9Y5R5 561 aa15.09■□□□□ 0.01
CDHR4-203ENST00000460430 KNDC1Q76NI1 1749 aa15.09■□□□□ 0.01
CDHR4-203ENST00000460430 EIF4G2P78344 907 aaKnown RBP eCLIP15.08■□□□□ 0
CDHR4-203ENST00000460430 TRAK1Q9UPV9 953 aa15.08■□□□□ 0
CDHR4-203ENST00000460430 CPS1P31327 1500 aa15.07■□□□□ 0
CDHR4-203ENST00000460430 XRN1Q8IZH2 1706 aaKnown RBP15.07■□□□□ 0
CDHR4-203ENST00000460430 ARHGEF28Q8N1W1 1705 aaKnown RBP15.07■□□□□ 0
CDHR4-203ENST00000460430 DLC1Q96QB1 1528 aa15.07■□□□□ 0
CDHR4-203ENST00000460430 TECPR2O15040 1411 aa15.06■□□□□ 0
CDHR4-203ENST00000460430 PTPRUQ92729 1446 aa15.06■□□□□ 0
CDHR4-203ENST00000460430 NWD1Q149M9 1564 aa15.06■□□□□ 0
CDHR4-203ENST00000460430 AMOTL2Q9Y2J4 779 aa15.05■□□□□ -0
CDHR4-203ENST00000460430 ABCC11Q96J66 1382 aa15.05■□□□□ -0
CDHR4-203ENST00000460430 PTCH1Q13635 1447 aa15.05■□□□□ -0
CDHR4-203ENST00000460430 HSPA5P11021 654 aaKnown RBP15.04■□□□□ -0
CDHR4-203ENST00000460430 CHD2O14647 1828 aaKnown RBP15.03■□□□□ -0
CDHR4-203ENST00000460430 NKTRP30414 1462 aaKnown RBP15.03■□□□□ -0
CDHR4-203ENST00000460430 CENPJQ9HC77 1338 aaPredicted RBP15.03■□□□□ -0
CDHR4-203ENST00000460430 POGKQ9P215 609 aa15.03■□□□□ -0
CDHR4-203ENST00000460430 QRICH2Q9H0J4 1663 aa15.03■□□□□ -0
CDHR4-203ENST00000460430 FAM135BQ49AJ0 1406 aa15.02■□□□□ -0
CDHR4-203ENST00000460430 KCNA6P17658 529 aa15.02■□□□□ -0
CDHR4-203ENST00000460430 PRAM1Q96QH2 718 aa15.02■□□□□ -0
CDHR4-203ENST00000460430 ROBO2Q9HCK4 1378 aa15.01□□□□□ -0.01
CDHR4-203ENST00000460430 ST20-MTHFSA0A0A6YYL1 179 aa15.01□□□□□ -0.01
CDHR4-203ENST00000460430 HIRIP3Q9BW71 556 aaPredicted RBP15.01□□□□□ -0.01
CDHR4-203ENST00000460430 SAFB2Q14151 953 aaKnown RBP eCLIP15□□□□□ -0.01
CDHR4-203ENST00000460430 PLEKHH1Q9ULM0 1364 aa14.99□□□□□ -0.01
CDHR4-203ENST00000460430 ZNF335Q9H4Z2 1342 aaPredicted RBP14.98□□□□□ -0.01
CDHR4-203ENST00000460430 SBNO2Q9Y2G9 1366 aa14.98□□□□□ -0.01
CDHR4-203ENST00000460430 WAPLQ7Z5K2 1190 aa14.97□□□□□ -0.01
CDHR4-203ENST00000460430 SIRT1Q96EB6 747 aa14.97□□□□□ -0.01
CDHR4-203ENST00000460430 STRCP1A6NGW2 1772 aa14.97□□□□□ -0.01
CDHR4-203ENST00000460430 C14orf37Q86TY3 774 aa14.96□□□□□ -0.01
CDHR4-203ENST00000460430 MINK1Q8N4C8 1332 aaPredicted RBP14.95□□□□□ -0.02
CDHR4-203ENST00000460430 SLC24A1O60721 1099 aa14.95□□□□□ -0.02
CDHR4-203ENST00000460430 TMF1P82094 1093 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms