RNA–Protein interactions for RNA: ENST00000460331.5

ZNF3-211, Transcript of zinc finger protein 3, humanhuman

TSL 4

Gene ZNF3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-211ENST00000460331 UBR1Q8IWV7 1749 aa17.85■□□□□ 0.45
ZNF3-211ENST00000460331 ZNF142P52746 1687 aaPredicted RBP17.84■□□□□ 0.45
ZNF3-211ENST00000460331 EID1Q9Y6B2 187 aa17.84■□□□□ 0.45
ZNF3-211ENST00000460331 RIMS2Q9UQ26 1411 aa17.83■□□□□ 0.45
ZNF3-211ENST00000460331 TMEM2Q9UHN6 1383 aa17.83■□□□□ 0.45
ZNF3-211ENST00000460331 ZFYVE9O95405 1425 aa17.81■□□□□ 0.44
ZNF3-211ENST00000460331 NEXMIFQ5QGS0 1516 aa17.81■□□□□ 0.44
ZNF3-211ENST00000460331 MYO5BQ9ULV0 1848 aa17.81■□□□□ 0.44
ZNF3-211ENST00000460331 MYOM2P54296 1465 aa17.81■□□□□ 0.44
ZNF3-211ENST00000460331 PPLO60437 1756 aa17.79■□□□□ 0.44
ZNF3-211ENST00000460331 SLIT1O75093 1534 aa17.79■□□□□ 0.44
ZNF3-211ENST00000460331 TXNDC2Q86VQ3 553 aa17.79■□□□□ 0.44
ZNF3-211ENST00000460331 ANKLE2Q86XL3 938 aa17.79■□□□□ 0.44
ZNF3-211ENST00000460331 IFT172Q9UG01 1749 aa17.78■□□□□ 0.44
ZNF3-211ENST00000460331 ARHGAP23Q9P227 1491 aa17.78■□□□□ 0.44
ZNF3-211ENST00000460331 NUTM2DQ5VT03 806 aaPredicted RBP17.77■□□□□ 0.44
ZNF3-211ENST00000460331 ADGRF5Q8IZF2 1346 aa17.76■□□□□ 0.43
ZNF3-211ENST00000460331 PRAG1Q86YV5 1406 aa17.76■□□□□ 0.43
ZNF3-211ENST00000460331 NBPF8Q3BBV2 869 aa17.75■□□□□ 0.43
ZNF3-211ENST00000460331 BCANQ96GW7 911 aa17.75■□□□□ 0.43
ZNF3-211ENST00000460331 LTKP29376 864 aa17.74■□□□□ 0.43
ZNF3-211ENST00000460331 NRXN1Q9ULB1 1477 aa17.74■□□□□ 0.43
ZNF3-211ENST00000460331 SCAF11Q99590 1463 aaKnown RBP17.73■□□□□ 0.43
ZNF3-211ENST00000460331 LMTK3Q96Q04 1460 aa17.72■□□□□ 0.43
ZNF3-211ENST00000460331 PLEKHG1Q9ULL1 1385 aa17.72■□□□□ 0.43
ZNF3-211ENST00000460331 AEBP2Q6ZN18 517 aaPredicted RBP17.72■□□□□ 0.43
ZNF3-211ENST00000460331 PIK3C2GO75747 1445 aa17.72■□□□□ 0.43
ZNF3-211ENST00000460331 C14orf93Q9H972 538 aaKnown RBP17.71■□□□□ 0.43
ZNF3-211ENST00000460331 CFAP70Q5T0N1 1121 aa17.69■□□□□ 0.42
ZNF3-211ENST00000460331 ROCK2O75116 1388 aaKnown RBP17.68■□□□□ 0.42
ZNF3-211ENST00000460331 HSPA2P54652 639 aa17.68■□□□□ 0.42
ZNF3-211ENST00000460331 RALGAPBQ86X10 1494 aa17.68■□□□□ 0.42
ZNF3-211ENST00000460331 KIAA1210Q9ULL0 1709 aa17.67■□□□□ 0.42
ZNF3-211ENST00000460331 NCKAP5LQ9HCH0 1330 aa17.67■□□□□ 0.42
ZNF3-211ENST00000460331 SETBP1Q9Y6X0 1596 aa17.66■□□□□ 0.42
ZNF3-211ENST00000460331 LAMC1P11047 1609 aa17.66■□□□□ 0.42
ZNF3-211ENST00000460331 TRPM1Q7Z4N2 1603 aa17.66■□□□□ 0.42
ZNF3-211ENST00000460331 CARD11Q9BXL7 1154 aa17.66■□□□□ 0.42
ZNF3-211ENST00000460331 TBX22Q9Y458 520 aa17.66■□□□□ 0.42
ZNF3-211ENST00000460331 MED14O60244 1454 aa17.65■□□□□ 0.42
ZNF3-211ENST00000460331 NPHP4O75161 1426 aaPredicted RBP17.64■□□□□ 0.42
ZNF3-211ENST00000460331 NBPF1Q3BBV0 1214 aa17.64■□□□□ 0.41
ZNF3-211ENST00000460331 SENP3Q9H4L4 574 aaPredicted RBP17.64■□□□□ 0.41
ZNF3-211ENST00000460331 ALKQ9UM73 1620 aa17.64■□□□□ 0.41
ZNF3-211ENST00000460331 POLR1AO95602 1720 aaPredicted RBP17.64■□□□□ 0.41
ZNF3-211ENST00000460331 GPRASP1Q5JY77 1395 aa17.63■□□□□ 0.41
ZNF3-211ENST00000460331 SLC26A8Q96RN1 970 aa17.62■□□□□ 0.41
ZNF3-211ENST00000460331 DIP2AQ14689 1571 aa17.62■□□□□ 0.41
ZNF3-211ENST00000460331 DMRT2Q9Y5R5 561 aa17.61■□□□□ 0.41
ZNF3-211ENST00000460331 ADAMTS13Q76LX8 1427 aa17.61■□□□□ 0.41
ZNF3-211ENST00000460331 EIF4G2P78344 907 aaKnown RBP eCLIP17.6■□□□□ 0.41
ZNF3-211ENST00000460331 TMEM132EQ6IEE7 984 aa17.6■□□□□ 0.41
ZNF3-211ENST00000460331 NRXN3Q9Y4C0 1643 aa17.6■□□□□ 0.41
ZNF3-211ENST00000460331 IQGAP1P46940 1657 aa17.59■□□□□ 0.41
ZNF3-211ENST00000460331 PIK3R4Q99570 1358 aa17.59■□□□□ 0.41
ZNF3-211ENST00000460331 EIF3AQ14152 1382 aaKnown RBP17.57■□□□□ 0.4
ZNF3-211ENST00000460331 ADGRB1O14514 1584 aa17.57■□□□□ 0.4
ZNF3-211ENST00000460331 YTHDC2Q9H6S0 1430 aaKnown RBP17.55■□□□□ 0.4
ZNF3-211ENST00000460331 METP08581 1390 aa17.55■□□□□ 0.4
ZNF3-211ENST00000460331 LRPPRCP42704 1394 aaKnown RBP17.55■□□□□ 0.4
ZNF3-211ENST00000460331 ABCC11Q96J66 1382 aa17.54■□□□□ 0.4
ZNF3-211ENST00000460331 USP47Q96K76 1375 aa17.54■□□□□ 0.4
ZNF3-211ENST00000460331 STK26Q9P289 416 aa17.54■□□□□ 0.4
ZNF3-211ENST00000460331 TRAK1Q9UPV9 953 aa17.54■□□□□ 0.4
ZNF3-211ENST00000460331 SETD1AO15047 1707 aaKnown RBP17.54■□□□□ 0.4
ZNF3-211ENST00000460331 STRCQ7RTU9 1775 aa17.53■□□□□ 0.4
ZNF3-211ENST00000460331 ASXL1Q8IXJ9 1541 aa17.53■□□□□ 0.4
ZNF3-211ENST00000460331 SLC24A1O60721 1099 aa17.53■□□□□ 0.4
ZNF3-211ENST00000460331 HSPA5P11021 654 aaKnown RBP17.52■□□□□ 0.4
ZNF3-211ENST00000460331 SIRT1Q96EB6 747 aa17.52■□□□□ 0.4
ZNF3-211ENST00000460331 AMOTL2Q9Y2J4 779 aa17.52■□□□□ 0.4
ZNF3-211ENST00000460331 KCNA6P17658 529 aa17.5■□□□□ 0.39
ZNF3-211ENST00000460331 POGKQ9P215 609 aa17.5■□□□□ 0.39
ZNF3-211ENST00000460331 DLC1Q96QB1 1528 aa17.49■□□□□ 0.39
ZNF3-211ENST00000460331 ST20-MTHFSA0A0A6YYL1 179 aa17.49■□□□□ 0.39
ZNF3-211ENST00000460331 CENPJQ9HC77 1338 aaPredicted RBP17.48■□□□□ 0.39
ZNF3-211ENST00000460331 TECPR2O15040 1411 aa17.48■□□□□ 0.39
ZNF3-211ENST00000460331 FAM135BQ49AJ0 1406 aa17.47■□□□□ 0.39
ZNF3-211ENST00000460331 PTPRUQ92729 1446 aa17.47■□□□□ 0.39
ZNF3-211ENST00000460331 KNDC1Q76NI1 1749 aa17.47■□□□□ 0.39
ZNF3-211ENST00000460331 PRAM1Q96QH2 718 aa17.46■□□□□ 0.39
ZNF3-211ENST00000460331 CHD2O14647 1828 aaKnown RBP17.46■□□□□ 0.39
ZNF3-211ENST00000460331 CPS1P31327 1500 aa17.45■□□□□ 0.38
ZNF3-211ENST00000460331 PTCH1Q13635 1447 aa17.45■□□□□ 0.38
ZNF3-211ENST00000460331 ZNF316A6NFI3 1004 aaPredicted RBP17.44■□□□□ 0.38
ZNF3-211ENST00000460331 ARHGEF28Q8N1W1 1705 aaKnown RBP17.44■□□□□ 0.38
ZNF3-211ENST00000460331 HIRIP3Q9BW71 556 aaPredicted RBP17.43■□□□□ 0.38
ZNF3-211ENST00000460331 XRN1Q8IZH2 1706 aaKnown RBP17.43■□□□□ 0.38
ZNF3-211ENST00000460331 ROBO2Q9HCK4 1378 aa17.42■□□□□ 0.38
ZNF3-211ENST00000460331 SBNO2Q9Y2G9 1366 aa17.42■□□□□ 0.38
ZNF3-211ENST00000460331 NWD1Q149M9 1564 aa17.42■□□□□ 0.38
ZNF3-211ENST00000460331 TMF1P82094 1093 aa17.42■□□□□ 0.38
ZNF3-211ENST00000460331 WAPLQ7Z5K2 1190 aa17.42■□□□□ 0.38
ZNF3-211ENST00000460331 PROSER2Q86WR7 435 aaPredicted RBP17.42■□□□□ 0.38
ZNF3-211ENST00000460331 SAFB2Q14151 953 aaKnown RBP eCLIP17.41■□□□□ 0.38
ZNF3-211ENST00000460331 CDCA8Q53HL2 280 aa17.41■□□□□ 0.38
ZNF3-211ENST00000460331 TESK2Q96S53 571 aa17.41■□□□□ 0.38
ZNF3-211ENST00000460331 NKTRP30414 1462 aaKnown RBP17.41■□□□□ 0.38
ZNF3-211ENST00000460331 EVC2Q86UK5 1308 aa17.38■□□□□ 0.37
ZNF3-211ENST00000460331 MINK1Q8N4C8 1332 aaPredicted RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms