RNA–Protein interactions for RNA: ENST00000459670.2

NEDD9-205, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-205ENST00000459670 ADGRB1O14514 1584 aa15.04■□□□□ -0
NEDD9-205ENST00000459670 ASXL1Q8IXJ9 1541 aa15.04■□□□□ -0
NEDD9-205ENST00000459670 SLC52A1Q9NWF4 448 aa15.04■□□□□ -0
NEDD9-205ENST00000459670 TNRQ92752 1358 aa15.03■□□□□ -0
NEDD9-205ENST00000459670 CEP170BQ9Y4F5 1589 aaPredicted RBP15.02■□□□□ -0
NEDD9-205ENST00000459670 SETD1BQ9UPS6 1966 aaKnown RBP15.02■□□□□ -0
NEDD9-205ENST00000459670 IDI1Q13907 227 aa15.02■□□□□ -0
NEDD9-205ENST00000459670 SLIT1O75093 1534 aa15.02□□□□□ -0.01
NEDD9-205ENST00000459670 ARHGAP23Q9P227 1491 aa15.01□□□□□ -0.01
NEDD9-205ENST00000459670 ARID4BQ4LE39 1312 aaPredicted RBP15.01□□□□□ -0.01
NEDD9-205ENST00000459670 STAC3Q96MF2 364 aa15□□□□□ -0.01
NEDD9-205ENST00000459670 PTPRMP28827 1452 aa14.99□□□□□ -0.01
NEDD9-205ENST00000459670 ARHGEF28Q8N1W1 1705 aaKnown RBP14.98□□□□□ -0.01
NEDD9-205ENST00000459670 RPGRIP1LQ68CZ1 1315 aa14.97□□□□□ -0.01
NEDD9-205ENST00000459670 DCAF11Q8TEB1 546 aa14.97□□□□□ -0.01
NEDD9-205ENST00000459670 KNDC1Q76NI1 1749 aa14.95□□□□□ -0.02
NEDD9-205ENST00000459670 RGL3Q3MIN7 710 aa14.95□□□□□ -0.02
NEDD9-205ENST00000459670 ADGRF5Q8IZF2 1346 aa14.94□□□□□ -0.02
NEDD9-205ENST00000459670 RIMS2Q9UQ26 1411 aa14.93□□□□□ -0.02
NEDD9-205ENST00000459670 ALKQ9UM73 1620 aa14.93□□□□□ -0.02
NEDD9-205ENST00000459670 CEBPAP49715 358 aaPredicted RBP14.92□□□□□ -0.02
NEDD9-205ENST00000459670 MED14O60244 1454 aa14.91□□□□□ -0.02
NEDD9-205ENST00000459670 USP47Q96K76 1375 aa14.91□□□□□ -0.02
NEDD9-205ENST00000459670 TMEM2Q9UHN6 1383 aa14.91□□□□□ -0.02
NEDD9-205ENST00000459670 ZNF316A6NFI3 1004 aaPredicted RBP14.91□□□□□ -0.02
NEDD9-205ENST00000459670 ESF1Q9H501 851 aaKnown RBP14.9□□□□□ -0.02
NEDD9-205ENST00000459670 SCAF11Q99590 1463 aaKnown RBP14.89□□□□□ -0.03
NEDD9-205ENST00000459670 ROCK2O75116 1388 aaKnown RBP14.89□□□□□ -0.03
NEDD9-205ENST00000459670 DIP2AQ14689 1571 aa14.89□□□□□ -0.03
NEDD9-205ENST00000459670 QRICH2Q9H0J4 1663 aa14.88□□□□□ -0.03
NEDD9-205ENST00000459670 NBPF1Q3BBV0 1214 aa14.88□□□□□ -0.03
NEDD9-205ENST00000459670 KDM2AQ9Y2K7 1162 aa14.88□□□□□ -0.03
NEDD9-205ENST00000459670 MYOM1P52179 1685 aa14.87□□□□□ -0.03
NEDD9-205ENST00000459670 ADAMTS13Q76LX8 1427 aa14.86□□□□□ -0.03
NEDD9-205ENST00000459670 HSPA5P11021 654 aaKnown RBP14.86□□□□□ -0.03
NEDD9-205ENST00000459670 C14orf93Q9H972 538 aaKnown RBP14.86□□□□□ -0.03
NEDD9-205ENST00000459670 CPS1P31327 1500 aa14.86□□□□□ -0.03
NEDD9-205ENST00000459670 DLC1Q96QB1 1528 aa14.86□□□□□ -0.03
NEDD9-205ENST00000459670 XRN1Q8IZH2 1706 aaKnown RBP14.86□□□□□ -0.03
NEDD9-205ENST00000459670 PLEKHG1Q9ULL1 1385 aa14.84□□□□□ -0.03
NEDD9-205ENST00000459670 EIF4G2P78344 907 aaKnown RBP eCLIP14.83□□□□□ -0.04
NEDD9-205ENST00000459670 ZNF326Q5BKZ1 582 aaKnown RBP14.83□□□□□ -0.04
NEDD9-205ENST00000459670 SBNO2Q9Y2G9 1366 aa14.83□□□□□ -0.04
NEDD9-205ENST00000459670 TECPR2O15040 1411 aa14.83□□□□□ -0.04
NEDD9-205ENST00000459670 VGFO15240 615 aaPredicted RBP14.82□□□□□ -0.04
NEDD9-205ENST00000459670 CHGAP10645 457 aaKnown RBP14.82□□□□□ -0.04
NEDD9-205ENST00000459670 CFAP70Q5T0N1 1121 aa14.82□□□□□ -0.04
NEDD9-205ENST00000459670 KDM4FA0A1W2PPD8 638 aa14.81□□□□□ -0.04
NEDD9-205ENST00000459670 CARD11Q9BXL7 1154 aa14.81□□□□□ -0.04
NEDD9-205ENST00000459670 CHD2O14647 1828 aaKnown RBP14.8□□□□□ -0.04
NEDD9-205ENST00000459670 TESK2Q96S53 571 aa14.8□□□□□ -0.04
NEDD9-205ENST00000459670 C11orf95C9JLR9 678 aaPredicted RBP14.79□□□□□ -0.04
NEDD9-205ENST00000459670 WASHC2AQ641Q2 1341 aa14.79□□□□□ -0.04
NEDD9-205ENST00000459670 CCDC7Q96M83 1385 aa14.79□□□□□ -0.04
NEDD9-205ENST00000459670 TULP4Q9NRJ4 1543 aa14.78□□□□□ -0.04
NEDD9-205ENST00000459670 LMTK3Q96Q04 1460 aa14.78□□□□□ -0.04
NEDD9-205ENST00000459670 YTHDC2Q9H6S0 1430 aaKnown RBP14.78□□□□□ -0.04
NEDD9-205ENST00000459670 LTKP29376 864 aa14.78□□□□□ -0.04
NEDD9-205ENST00000459670 STRCQ7RTU9 1775 aa14.78□□□□□ -0.04
NEDD9-205ENST00000459670 ADGRB2O60241 1585 aa14.77□□□□□ -0.04
NEDD9-205ENST00000459670 NWD1Q149M9 1564 aa14.77□□□□□ -0.04
NEDD9-205ENST00000459670 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.76□□□□□ -0.05
NEDD9-205ENST00000459670 HIRIP3Q9BW71 556 aaPredicted RBP14.76□□□□□ -0.05
NEDD9-205ENST00000459670 LRPPRCP42704 1394 aaKnown RBP14.75□□□□□ -0.05
NEDD9-205ENST00000459670 DISP3Q9P2K9 1392 aa14.75□□□□□ -0.05
NEDD9-205ENST00000459670 NUTM2DQ5VT03 806 aaPredicted RBP14.75□□□□□ -0.05
NEDD9-205ENST00000459670 PTPRUQ92729 1446 aa14.75□□□□□ -0.05
NEDD9-205ENST00000459670 METP08581 1390 aa14.74□□□□□ -0.05
NEDD9-205ENST00000459670 KIF7Q2M1P5 1343 aa14.74□□□□□ -0.05
NEDD9-205ENST00000459670 ST20-MTHFSA0A0A6YYL1 179 aa14.74□□□□□ -0.05
NEDD9-205ENST00000459670 EIF3AQ14152 1382 aaKnown RBP14.73□□□□□ -0.05
NEDD9-205ENST00000459670 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.73□□□□□ -0.05
NEDD9-205ENST00000459670 THEMISQ8N1K5 641 aaPredicted RBP14.73□□□□□ -0.05
NEDD9-205ENST00000459670 ABCC11Q96J66 1382 aa14.73□□□□□ -0.05
NEDD9-205ENST00000459670 STAG3Q9UJ98 1225 aa14.72□□□□□ -0.05
NEDD9-205ENST00000459670 PTCH1Q13635 1447 aa14.72□□□□□ -0.05
NEDD9-205ENST00000459670 STRCP1A6NGW2 1772 aa14.71□□□□□ -0.05
NEDD9-205ENST00000459670 FAM135BQ49AJ0 1406 aa14.71□□□□□ -0.05
NEDD9-205ENST00000459670 TOPAZ1Q8N9V7 1692 aa14.71□□□□□ -0.06
NEDD9-205ENST00000459670 TMEM132EQ6IEE7 984 aa14.7□□□□□ -0.06
NEDD9-205ENST00000459670 PIK3R4Q99570 1358 aa14.69□□□□□ -0.06
NEDD9-205ENST00000459670 NALCNQ8IZF0 1738 aa14.68□□□□□ -0.06
NEDD9-205ENST00000459670 TXNDC2Q86VQ3 553 aa14.67□□□□□ -0.06
NEDD9-205ENST00000459670 CENPJQ9HC77 1338 aaPredicted RBP14.66□□□□□ -0.06
NEDD9-205ENST00000459670 NPHP4O75161 1426 aaPredicted RBP14.66□□□□□ -0.06
NEDD9-205ENST00000459670 HDGFP51858 240 aaKnown RBP14.66□□□□□ -0.06
NEDD9-205ENST00000459670 USP32Q8NFA0 1604 aa14.66□□□□□ -0.06
NEDD9-205ENST00000459670 PLEKHH1Q9ULM0 1364 aa14.65□□□□□ -0.06
NEDD9-205ENST00000459670 PLPPR3Q6T4P5 718 aa14.65□□□□□ -0.06
NEDD9-205ENST00000459670 TBX22Q9Y458 520 aa14.65□□□□□ -0.06
NEDD9-205ENST00000459670 XIRP1Q702N8 1843 aaKnown RBP14.64□□□□□ -0.07
NEDD9-205ENST00000459670 ROBO2Q9HCK4 1378 aa14.64□□□□□ -0.07
NEDD9-205ENST00000459670 DIEXFQ68CQ4 756 aaKnown RBP14.64□□□□□ -0.07
NEDD9-205ENST00000459670 SIRT1Q96EB6 747 aa14.64□□□□□ -0.07
NEDD9-205ENST00000459670 EID1Q9Y6B2 187 aa14.63□□□□□ -0.07
NEDD9-205ENST00000459670 FMN2Q9NZ56 1722 aa14.63□□□□□ -0.07
NEDD9-205ENST00000459670 AKAP12Q02952 1782 aa14.62□□□□□ -0.07
NEDD9-205ENST00000459670 TRAK1Q9UPV9 953 aa14.62□□□□□ -0.07
NEDD9-205ENST00000459670 CDC42BPGQ6DT37 1551 aa14.61□□□□□ -0.07
NEDD9-205ENST00000459670 MON2Q7Z3U7 1717 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms