RNA–Protein interactions for RNA: ENST00000458642.5

HDAC11-216, Transcript of histone deacetylase 11, humanhuman

TSL 5

Gene HDAC11, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-216ENST00000458642 PROSER2Q86WR7 435 aaPredicted RBP28.77■■■□□ 2.2
HDAC11-216ENST00000458642 ZFYVE9O95405 1425 aa28.77■■■□□ 2.2
HDAC11-216ENST00000458642 FAM135BQ49AJ0 1406 aa28.76■■■□□ 2.19
HDAC11-216ENST00000458642 ROBO1Q9Y6N7 1651 aa28.75■■■□□ 2.19
HDAC11-216ENST00000458642 UNC13BO14795 1591 aa28.75■■■□□ 2.19
HDAC11-216ENST00000458642 TMEM131LA2VDJ0 1609 aa28.74■■■□□ 2.19
HDAC11-216ENST00000458642 BCANQ96GW7 911 aa28.74■■■□□ 2.19
HDAC11-216ENST00000458642 RGS17Q9UGC6 210 aaPredicted RBP28.74■■■□□ 2.19
HDAC11-216ENST00000458642 NKTRP30414 1462 aaKnown RBP28.72■■■□□ 2.19
HDAC11-216ENST00000458642 E9PCH4 1651 aa28.7■■■□□ 2.19
HDAC11-216ENST00000458642 RIMS2Q9UQ26 1411 aa28.7■■■□□ 2.19
HDAC11-216ENST00000458642 PLEKHG1Q9ULL1 1385 aa28.68■■■□□ 2.18
HDAC11-216ENST00000458642 CHD2O14647 1828 aaKnown RBP28.66■■■□□ 2.18
HDAC11-216ENST00000458642 NUTM2DQ5VT03 806 aaPredicted RBP28.65■■■□□ 2.18
HDAC11-216ENST00000458642 PPP1R15AO75807 674 aaPredicted RBP28.64■■■□□ 2.18
HDAC11-216ENST00000458642 CHGAP10645 457 aaKnown RBP28.64■■■□□ 2.18
HDAC11-216ENST00000458642 IQGAP3Q86VI3 1631 aa28.62■■■□□ 2.17
HDAC11-216ENST00000458642 MSH6P52701 1360 aa28.62■■■□□ 2.17
HDAC11-216ENST00000458642 ROCK1Q13464 1354 aa28.61■■■□□ 2.17
HDAC11-216ENST00000458642 ITGAEP38570 1179 aa28.59■■■□□ 2.17
HDAC11-216ENST00000458642 PPARGC1BQ86YN6 1023 aaKnown RBP28.59■■■□□ 2.17
HDAC11-216ENST00000458642 ADAMTS13Q76LX8 1427 aa28.59■■■□□ 2.17
HDAC11-216ENST00000458642 SLAIN2Q9P270 581 aa28.57■■■□□ 2.16
HDAC11-216ENST00000458642 PHLPP1O60346 1717 aa28.56■■■□□ 2.16
HDAC11-216ENST00000458642 POTEAQ6S8J7 498 aa28.55■■■□□ 2.16
HDAC11-216ENST00000458642 TBX22Q9Y458 520 aa28.55■■■□□ 2.16
HDAC11-216ENST00000458642 NUP155O75694 1391 aa28.54■■■□□ 2.16
HDAC11-216ENST00000458642 HDGFP51858 240 aaKnown RBP28.53■■■□□ 2.16
HDAC11-216ENST00000458642 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.51■■■□□ 2.15
HDAC11-216ENST00000458642 COL16A1Q07092 1604 aaPredicted RBP28.49■■■□□ 2.15
HDAC11-216ENST00000458642 DIP2AQ14689 1571 aa28.49■■■□□ 2.15
HDAC11-216ENST00000458642 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.47■■■□□ 2.15
HDAC11-216ENST00000458642 PTPRUQ92729 1446 aa28.47■■■□□ 2.15
HDAC11-216ENST00000458642 C14orf37Q86TY3 774 aa28.46■■■□□ 2.15
HDAC11-216ENST00000458642 NCOA3Q9Y6Q9 1424 aa28.43■■■□□ 2.14
HDAC11-216ENST00000458642 NRXN3Q9Y4C0 1643 aa28.43■■■□□ 2.14
HDAC11-216ENST00000458642 JCADQ9P266 1359 aa28.43■■■□□ 2.14
HDAC11-216ENST00000458642 SPHKAPQ2M3C7 1700 aa28.43■■■□□ 2.14
HDAC11-216ENST00000458642 TRPM2O94759 1503 aa28.43■■■□□ 2.14
HDAC11-216ENST00000458642 PIK3R4Q99570 1358 aa28.41■■■□□ 2.14
HDAC11-216ENST00000458642 AMOTL2Q9Y2J4 779 aa28.4■■■□□ 2.14
HDAC11-216ENST00000458642 LRP6O75581 1613 aa28.4■■■□□ 2.14
HDAC11-216ENST00000458642 SETD1AO15047 1707 aaKnown RBP28.39■■■□□ 2.14
HDAC11-216ENST00000458642 C19orf44Q9H6X5 657 aa28.38■■■□□ 2.13
HDAC11-216ENST00000458642 XRN1Q8IZH2 1706 aaKnown RBP28.36■■■□□ 2.13
HDAC11-216ENST00000458642 AHDC1Q5TGY3 1603 aaPredicted RBP28.36■■■□□ 2.13
HDAC11-216ENST00000458642 ATF3P18847 181 aa28.35■■■□□ 2.13
HDAC11-216ENST00000458642 CADPS2Q86UW7 1296 aa28.35■■■□□ 2.13
HDAC11-216ENST00000458642 SETBP1Q9Y6X0 1596 aa28.35■■■□□ 2.13
HDAC11-216ENST00000458642 CLTCL1P53675 1640 aa28.33■■■□□ 2.13
HDAC11-216ENST00000458642 METP08581 1390 aa28.32■■■□□ 2.12
HDAC11-216ENST00000458642 ZNF326Q5BKZ1 582 aaKnown RBP28.31■■■□□ 2.12
HDAC11-216ENST00000458642 BRINP3Q76B58 766 aa28.3■■■□□ 2.12
HDAC11-216ENST00000458642 SHPRHQ149N8 1683 aa28.29■■■□□ 2.12
HDAC11-216ENST00000458642 NEXMIFQ5QGS0 1516 aa28.28■■■□□ 2.12
HDAC11-216ENST00000458642 SPATA31A6Q5VVP1 1343 aa28.26■■■□□ 2.11
HDAC11-216ENST00000458642 ASXL1Q8IXJ9 1541 aa28.25■■■□□ 2.11
HDAC11-216ENST00000458642 MST1RQ04912 1400 aa28.25■■■□□ 2.11
HDAC11-216ENST00000458642 NAIPQ13075 1403 aa28.25■■■□□ 2.11
HDAC11-216ENST00000458642 DCCP43146 1447 aa28.24■■■□□ 2.11
HDAC11-216ENST00000458642 RRBP1Q9P2E9 1410 aaKnown RBP28.24■■■□□ 2.11
HDAC11-216ENST00000458642 MEX3CQ5U5Q3 659 aaKnown RBP28.23■■■□□ 2.11
HDAC11-216ENST00000458642 NALCNQ8IZF0 1738 aa28.21■■■□□ 2.11
HDAC11-216ENST00000458642 NHSL1Q5SYE7 1610 aa28.19■■■□□ 2.1
HDAC11-216ENST00000458642 NUTM2BA6NNL0 878 aaPredicted RBP28.19■■■□□ 2.1
HDAC11-216ENST00000458642 NUTM2EB1AL46 878 aaPredicted RBP28.19■■■□□ 2.1
HDAC11-216ENST00000458642 NUTM2AQ8IVF1 878 aaPredicted RBP28.19■■■□□ 2.1
HDAC11-216ENST00000458642 DDX17Q92841 729 aaKnown RBP28.19■■■□□ 2.1
HDAC11-216ENST00000458642 KIF1BO60333 1816 aa28.18■■■□□ 2.1
HDAC11-216ENST00000458642 ADGRL3Q9HAR2 1447 aa28.17■■■□□ 2.1
HDAC11-216ENST00000458642 TRIM52Q96A61 297 aa28.14■■■□□ 2.1
HDAC11-216ENST00000458642 SETD5Q9C0A6 1442 aa28.13■■■□□ 2.09
HDAC11-216ENST00000458642 ZNF772Q68DY9 489 aaPredicted RBP28.13■■■□□ 2.09
HDAC11-216ENST00000458642 ROBO2Q9HCK4 1378 aa28.09■■■□□ 2.09
HDAC11-216ENST00000458642 HFM1A2PYH4 1435 aa28.08■■■□□ 2.09
HDAC11-216ENST00000458642 AFF2P51816 1311 aa28.06■■■□□ 2.08
HDAC11-216ENST00000458642 C1orf167Q5SNV9 1468 aa28.05■■■□□ 2.08
HDAC11-216ENST00000458642 PNPLA6Q8IY17 1366 aa28.05■■■□□ 2.08
HDAC11-216ENST00000458642 PTCH1Q13635 1447 aa28.04■■■□□ 2.08
HDAC11-216ENST00000458642 UPF1Q92900 1129 aaKnown RBP eCLIP28.03■■■□□ 2.088e-9■■■■■ 30.2
HDAC11-216ENST00000458642 LRRC59Q96AG4 307 aaKnown RBP28.03■■■□□ 2.08
HDAC11-216ENST00000458642 PPLO60437 1756 aa28.03■■■□□ 2.08
HDAC11-216ENST00000458642 RXRBP28702 533 aa28.02■■■□□ 2.08
HDAC11-216ENST00000458642 FOXD1Q16676 465 aa28.02■■■□□ 2.08
HDAC11-216ENST00000458642 SLC4A1APQ9BWU0 796 aaKnown RBP28.02■■■□□ 2.08
HDAC11-216ENST00000458642 VGFO15240 615 aaPredicted RBP28.01■■■□□ 2.07
HDAC11-216ENST00000458642 C8orf37Q96NL8 207 aa28■■■□□ 2.07
HDAC11-216ENST00000458642 ORAI2Q96SN7 254 aa28■■■□□ 2.07
HDAC11-216ENST00000458642 LAMC1P11047 1609 aa27.98■■■□□ 2.07
HDAC11-216ENST00000458642 PRAG1Q86YV5 1406 aa27.96■■■□□ 2.07
HDAC11-216ENST00000458642 CDK12Q9NYV4 1490 aaPredicted RBP27.95■■■□□ 2.06
HDAC11-216ENST00000458642 RPGRIP1LQ68CZ1 1315 aa27.94■■■□□ 2.06
HDAC11-216ENST00000458642 ADAMTS2O95450 1211 aa27.94■■■□□ 2.06
HDAC11-216ENST00000458642 RGS12O14924 1447 aa27.92■■■□□ 2.06
HDAC11-216ENST00000458642 SOS2Q07890 1332 aaPredicted RBP27.92■■■□□ 2.06
HDAC11-216ENST00000458642 ADGRF5Q8IZF2 1346 aa27.91■■■□□ 2.06
HDAC11-216ENST00000458642 QTRT2Q9H974 415 aaKnown RBP27.9■■■□□ 2.06
HDAC11-216ENST00000458642 RGL3Q3MIN7 710 aa27.86■■■□□ 2.05
HDAC11-216ENST00000458642 NGLY1Q96IV0 654 aa27.86■■■□□ 2.05
HDAC11-216ENST00000458642 CDC42BPGQ6DT37 1551 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms