RNA–Protein interactions for RNA: ENST00000458085.6

CAPN13-203, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-203ENST00000458085 CFAP70Q5T0N1 1121 aa22.55■■□□□ 1.2
CAPN13-203ENST00000458085 KIAA1210Q9ULL0 1709 aa22.54■■□□□ 1.2
CAPN13-203ENST00000458085 PIK3C2BO00750 1634 aa22.53■■□□□ 1.2
CAPN13-203ENST00000458085 NRXN1Q9ULB1 1477 aa22.53■■□□□ 1.2
CAPN13-203ENST00000458085 SCAF11Q99590 1463 aaKnown RBP22.52■■□□□ 1.2
CAPN13-203ENST00000458085 REREQ9P2R6 1566 aa22.51■■□□□ 1.19
CAPN13-203ENST00000458085 PPLO60437 1756 aa22.51■■□□□ 1.19
CAPN13-203ENST00000458085 AGLP35573 1532 aa22.49■■□□□ 1.19
CAPN13-203ENST00000458085 TMF1P82094 1093 aa22.48■■□□□ 1.19
CAPN13-203ENST00000458085 IDI1Q13907 227 aa22.48■■□□□ 1.19
CAPN13-203ENST00000458085 MRS2Q9HD23 443 aa22.47■■□□□ 1.19
CAPN13-203ENST00000458085 PREX1Q8TCU6 1659 aa22.47■■□□□ 1.19
CAPN13-203ENST00000458085 FBXO31Q5XUX0 539 aaPredicted RBP22.46■■□□□ 1.19
CAPN13-203ENST00000458085 ARHGEF40Q8TER5 1519 aa22.45■■□□□ 1.19
CAPN13-203ENST00000458085 NUTM2DQ5VT03 806 aaPredicted RBP22.45■■□□□ 1.18
CAPN13-203ENST00000458085 PIK3C2GO75747 1445 aa22.44■■□□□ 1.18
CAPN13-203ENST00000458085 MLECQ14165 292 aa22.43■■□□□ 1.18
CAPN13-203ENST00000458085 RPGRIP1LQ68CZ1 1315 aa22.42■■□□□ 1.18
CAPN13-203ENST00000458085 NEXMIFQ5QGS0 1516 aa22.42■■□□□ 1.18
CAPN13-203ENST00000458085 MYO5BQ9ULV0 1848 aa22.42■■□□□ 1.18
CAPN13-203ENST00000458085 CLTCQ00610 1675 aaKnown RBP22.41■■□□□ 1.18
CAPN13-203ENST00000458085 PER1O15534 1290 aaPredicted RBP22.41■■□□□ 1.18
CAPN13-203ENST00000458085 FAM9BQ8IZU0 186 aa22.41■■□□□ 1.18
CAPN13-203ENST00000458085 HNRNPUQ00839 825 aaKnown RBP eCLIP22.41■■□□□ 1.18
CAPN13-203ENST00000458085 SLC52A1Q9NWF4 448 aa22.41■■□□□ 1.18
CAPN13-203ENST00000458085 EIF3AQ14152 1382 aaKnown RBP22.39■■□□□ 1.18
CAPN13-203ENST00000458085 ERVK-7P63135 1459 aa22.39■■□□□ 1.18
CAPN13-203ENST00000458085 C14orf93Q9H972 538 aaKnown RBP22.39■■□□□ 1.17
CAPN13-203ENST00000458085 PANK3Q9H999 370 aa22.38■■□□□ 1.17
CAPN13-203ENST00000458085 SETBP1Q9Y6X0 1596 aa22.38■■□□□ 1.17
CAPN13-203ENST00000458085 TMEM131LA2VDJ0 1609 aa22.37■■□□□ 1.17
CAPN13-203ENST00000458085 ADGRB1O14514 1584 aa22.37■■□□□ 1.17
CAPN13-203ENST00000458085 TMEM132EQ6IEE7 984 aa22.36■■□□□ 1.17
CAPN13-203ENST00000458085 PPP6R1Q9UPN7 881 aa22.36■■□□□ 1.17
CAPN13-203ENST00000458085 VGFO15240 615 aaPredicted RBP22.33■■□□□ 1.16
CAPN13-203ENST00000458085 SENP3Q9H4L4 574 aaPredicted RBP22.33■■□□□ 1.16
CAPN13-203ENST00000458085 TRAK1Q9UPV9 953 aa22.33■■□□□ 1.16
CAPN13-203ENST00000458085 MYO3AQ8NEV4 1616 aa22.32■■□□□ 1.16
CAPN13-203ENST00000458085 RALBP1Q15311 655 aa22.31■■□□□ 1.16
CAPN13-203ENST00000458085 PARD3Q8TEW0 1356 aa22.3■■□□□ 1.16
CAPN13-203ENST00000458085 MYBBP1AQ9BQG0 1328 aaKnown RBP22.3■■□□□ 1.16
CAPN13-203ENST00000458085 KTN1Q86UP2 1357 aaKnown RBP22.3■■□□□ 1.16
CAPN13-203ENST00000458085 MYOM1P52179 1685 aa22.3■■□□□ 1.16
CAPN13-203ENST00000458085 CDCA8Q53HL2 280 aa22.29■■□□□ 1.16
CAPN13-203ENST00000458085 SPATA31D1Q6ZQQ2 1576 aa22.29■■□□□ 1.16
CAPN13-203ENST00000458085 CC2D1BQ5T0F9 858 aaKnown RBP22.28■■□□□ 1.16
CAPN13-203ENST00000458085 ZFYVE9O95405 1425 aa22.28■■□□□ 1.16
CAPN13-203ENST00000458085 CENPJQ9HC77 1338 aaPredicted RBP22.28■■□□□ 1.16
CAPN13-203ENST00000458085 KDM5AP29375 1690 aaKnown RBP22.27■■□□□ 1.16
CAPN13-203ENST00000458085 TMC1Q8TDI8 760 aa22.26■■□□□ 1.15
CAPN13-203ENST00000458085 PNISRQ8TF01 805 aaKnown RBP22.26■■□□□ 1.15
CAPN13-203ENST00000458085 SBNO2Q9Y2G9 1366 aa22.25■■□□□ 1.15
CAPN13-203ENST00000458085 ZMYM3Q14202 1370 aa22.24■■□□□ 1.15
CAPN13-203ENST00000458085 QRICH2Q9H0J4 1663 aa22.24■■□□□ 1.15
CAPN13-203ENST00000458085 ASXL1Q8IXJ9 1541 aa22.24■■□□□ 1.15
CAPN13-203ENST00000458085 BRD4O60885 1362 aaPredicted RBP22.24■■□□□ 1.15
CAPN13-203ENST00000458085 STAG3Q9UJ98 1225 aa22.23■■□□□ 1.15
CAPN13-203ENST00000458085 A2ML1A8K2U0 1454 aa22.21■■□□□ 1.15
CAPN13-203ENST00000458085 ARHGEF28Q8N1W1 1705 aaKnown RBP22.21■■□□□ 1.15
CAPN13-203ENST00000458085 ESF1Q9H501 851 aaKnown RBP22.21■■□□□ 1.15
CAPN13-203ENST00000458085 TRHP20396 242 aaPredicted RBP22.2■■□□□ 1.14
CAPN13-203ENST00000458085 SLC24A1O60721 1099 aa22.19■■□□□ 1.14
CAPN13-203ENST00000458085 NLRP13Q86W25 1043 aa22.19■■□□□ 1.14
CAPN13-203ENST00000458085 SUPT16HQ9Y5B9 1047 aaKnown RBP22.19■■□□□ 1.14
CAPN13-203ENST00000458085 AMER1Q5JTC6 1135 aaPredicted RBP22.19■■□□□ 1.14
CAPN13-203ENST00000458085 KNSTRNQ9Y448 316 aa22.19■■□□□ 1.14
CAPN13-203ENST00000458085 ZBED9Q6R2W3 1325 aa22.18■■□□□ 1.14
CAPN13-203ENST00000458085 SENP3-EIF4A1A0A087X0R7 540 aa22.17■■□□□ 1.14
CAPN13-203ENST00000458085 STK26Q9P289 416 aa22.17■■□□□ 1.14
CAPN13-203ENST00000458085 LRPPRCP42704 1394 aaKnown RBP22.16■■□□□ 1.14
CAPN13-203ENST00000458085 ALKQ9UM73 1620 aa22.14■■□□□ 1.13
CAPN13-203ENST00000458085 RIMS2Q9UQ26 1411 aa22.14■■□□□ 1.13
CAPN13-203ENST00000458085 CARD14Q9BXL6 1004 aa22.14■■□□□ 1.13
CAPN13-203ENST00000458085 SAFB2Q14151 953 aaKnown RBP eCLIP22.13■■□□□ 1.13
CAPN13-203ENST00000458085 TULP4Q9NRJ4 1543 aa22.12■■□□□ 1.13
CAPN13-203ENST00000458085 YTHDC2Q9H6S0 1430 aaKnown RBP22.1■■□□□ 1.13
CAPN13-203ENST00000458085 TNRQ92752 1358 aa22.1■■□□□ 1.13
CAPN13-203ENST00000458085 PTPRMP28827 1452 aa22.1■■□□□ 1.13
CAPN13-203ENST00000458085 SLC12A5Q9H2X9 1139 aa22.09■■□□□ 1.13
CAPN13-203ENST00000458085 FKBP8Q14318 412 aa22.08■■□□□ 1.13
CAPN13-203ENST00000458085 PPP2R1AP30153 589 aa22.08■■□□□ 1.12
CAPN13-203ENST00000458085 CEBPAP49715 358 aaPredicted RBP22.08■■□□□ 1.12
CAPN13-203ENST00000458085 NPC1L1Q9UHC9 1359 aa22.07■■□□□ 1.12
CAPN13-203ENST00000458085 SETD1AO15047 1707 aaKnown RBP22.06■■□□□ 1.12
CAPN13-203ENST00000458085 EVC2Q86UK5 1308 aa22.06■■□□□ 1.12
CAPN13-203ENST00000458085 PRAM1Q96QH2 718 aa22.05■■□□□ 1.12
CAPN13-203ENST00000458085 CABP2Q9NPB3 220 aa22.04■■□□□ 1.12
CAPN13-203ENST00000458085 NRXN3Q9Y4C0 1643 aa22.04■■□□□ 1.12
CAPN13-203ENST00000458085 UBR1Q8IWV7 1749 aa22.02■■□□□ 1.12
CAPN13-203ENST00000458085 MINK1Q8N4C8 1332 aaPredicted RBP22.02■■□□□ 1.12
CAPN13-203ENST00000458085 NSD3Q9BZ95 1437 aa22.02■■□□□ 1.12
CAPN13-203ENST00000458085 POGKQ9P215 609 aa22■■□□□ 1.11
CAPN13-203ENST00000458085 BCANQ96GW7 911 aa22■■□□□ 1.11
CAPN13-203ENST00000458085 PLPPR3Q6T4P5 718 aa21.99■■□□□ 1.11
CAPN13-203ENST00000458085 PUS7Q96PZ0 661 aaKnown RBP21.99■■□□□ 1.11
CAPN13-203ENST00000458085 C3P01024 1663 aa21.99■■□□□ 1.11
CAPN13-203ENST00000458085 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.99■■□□□ 1.11
CAPN13-203ENST00000458085 NEFLP07196 543 aa21.98■■□□□ 1.11
CAPN13-203ENST00000458085 FER1L4A9Z1Z3 1794 aa21.97■■□□□ 1.11
CAPN13-203ENST00000458085 METP08581 1390 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms