RNA–Protein interactions for RNA: ENST00000457871.2

SCNN1A-206, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 5

Gene SCNN1A, Length 500 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-206ENST00000457871 LRP6O75581 1613 aa22.04■■□□□ 1.12
SCNN1A-206ENST00000457871 BCANQ96GW7 911 aa22.03■■□□□ 1.12
SCNN1A-206ENST00000457871 CHD2O14647 1828 aaKnown RBP22.03■■□□□ 1.12
SCNN1A-206ENST00000457871 UPF1Q92900 1129 aaKnown RBP eCLIP22■■□□□ 1.11
SCNN1A-206ENST00000457871 ZFYVE9O95405 1425 aa21.99■■□□□ 1.11
SCNN1A-206ENST00000457871 FGD6Q6ZV73 1430 aa21.99■■□□□ 1.11
SCNN1A-206ENST00000457871 SLC52A1Q9NWF4 448 aa21.99■■□□□ 1.11
SCNN1A-206ENST00000457871 SPATA31A6Q5VVP1 1343 aa21.99■■□□□ 1.11
SCNN1A-206ENST00000457871 PLEKHG1Q9ULL1 1385 aa21.99■■□□□ 1.11
SCNN1A-206ENST00000457871 MYO5BQ9ULV0 1848 aa21.98■■□□□ 1.11
SCNN1A-206ENST00000457871 ANKRD30AQ9BXX3 1397 aa21.98■■□□□ 1.11
SCNN1A-206ENST00000457871 MEX3CQ5U5Q3 659 aaKnown RBP21.96■■□□□ 1.11
SCNN1A-206ENST00000457871 ZNF772Q68DY9 489 aaPredicted RBP21.96■■□□□ 1.11
SCNN1A-206ENST00000457871 TRIM52Q96A61 297 aa21.96■■□□□ 1.11
SCNN1A-206ENST00000457871 CHIC2Q9UKJ5 165 aa21.96■■□□□ 1.11
SCNN1A-206ENST00000457871 SHPRHQ149N8 1683 aa21.95■■□□□ 1.1
SCNN1A-206ENST00000457871 NCOA3Q9Y6Q9 1424 aa21.95■■□□□ 1.1
SCNN1A-206ENST00000457871 AHDC1Q5TGY3 1603 aaPredicted RBP21.95■■□□□ 1.1
SCNN1A-206ENST00000457871 GCC2Q8IWJ2 1684 aa21.95■■□□□ 1.1
SCNN1A-206ENST00000457871 RIMS2Q9UQ26 1411 aa21.94■■□□□ 1.1
SCNN1A-206ENST00000457871 RPRD2Q5VT52 1461 aaKnown RBP21.93■■□□□ 1.1
SCNN1A-206ENST00000457871 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.92■■□□□ 1.1
SCNN1A-206ENST00000457871 PPP1R15AO75807 674 aaPredicted RBP21.92■■□□□ 1.1
SCNN1A-206ENST00000457871 TMEM131LA2VDJ0 1609 aa21.91■■□□□ 1.1
SCNN1A-206ENST00000457871 C14orf37Q86TY3 774 aa21.9■■□□□ 1.1
SCNN1A-206ENST00000457871 TBX22Q9Y458 520 aa21.9■■□□□ 1.1
SCNN1A-206ENST00000457871 HDGFP51858 240 aaKnown RBP21.88■■□□□ 1.09
SCNN1A-206ENST00000457871 CADPS2Q86UW7 1296 aa21.88■■□□□ 1.09
SCNN1A-206ENST00000457871 DIP2AQ14689 1571 aa21.87■■□□□ 1.09
SCNN1A-206ENST00000457871 RXRBP28702 533 aa21.87■■□□□ 1.09
SCNN1A-206ENST00000457871 ADGRL2O95490 1459 aa21.87■■□□□ 1.09
SCNN1A-206ENST00000457871 ADAMTS13Q76LX8 1427 aa21.87■■□□□ 1.09
SCNN1A-206ENST00000457871 CDK12Q9NYV4 1490 aaPredicted RBP21.86■■□□□ 1.09
SCNN1A-206ENST00000457871 LOC105371045A0A1W2PR82 267 aa21.86■■□□□ 1.09
SCNN1A-206ENST00000457871 ATF3P18847 181 aa21.86■■□□□ 1.09
SCNN1A-206ENST00000457871 C19orf44Q9H6X5 657 aa21.86■■□□□ 1.09
SCNN1A-206ENST00000457871 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.83■■□□□ 1.09
SCNN1A-206ENST00000457871 PIK3R4Q99570 1358 aa21.83■■□□□ 1.08
SCNN1A-206ENST00000457871 ANKRD50Q9ULJ7 1429 aa21.82■■□□□ 1.08
SCNN1A-206ENST00000457871 BRINP3Q76B58 766 aa21.82■■□□□ 1.08
SCNN1A-206ENST00000457871 NUTM2BA6NNL0 878 aaPredicted RBP21.81■■□□□ 1.08
SCNN1A-206ENST00000457871 NUTM2EB1AL46 878 aaPredicted RBP21.81■■□□□ 1.08
SCNN1A-206ENST00000457871 NUTM2DQ5VT03 806 aaPredicted RBP21.81■■□□□ 1.08
SCNN1A-206ENST00000457871 NUTM2AQ8IVF1 878 aaPredicted RBP21.81■■□□□ 1.08
SCNN1A-206ENST00000457871 CHGAP10645 457 aaKnown RBP21.8■■□□□ 1.08
SCNN1A-206ENST00000457871 AFF2P51816 1311 aa21.8■■□□□ 1.08
SCNN1A-206ENST00000457871 TRPM2O94759 1503 aa21.79■■□□□ 1.08
SCNN1A-206ENST00000457871 SRCAPQ6ZRS2 3230 aa21.79■■□□□ 1.08
SCNN1A-206ENST00000457871 APLP2Q06481 763 aa21.78■■□□□ 1.08
SCNN1A-206ENST00000457871 ASXL1Q8IXJ9 1541 aa21.78■■□□□ 1.08
SCNN1A-206ENST00000457871 PTPRUQ92729 1446 aa21.78■■□□□ 1.08
SCNN1A-206ENST00000457871 DCCP43146 1447 aa21.77■■□□□ 1.08
SCNN1A-206ENST00000457871 E9PCH4 1651 aa21.76■■□□□ 1.07
SCNN1A-206ENST00000457871 SETD5Q9C0A6 1442 aa21.76■■□□□ 1.07
SCNN1A-206ENST00000457871 AMOTL2Q9Y2J4 779 aa21.76■■□□□ 1.07
SCNN1A-206ENST00000457871 UNC13BO14795 1591 aa21.75■■□□□ 1.07
SCNN1A-206ENST00000457871 RGS12O14924 1447 aa21.75■■□□□ 1.07
SCNN1A-206ENST00000457871 NHSL1Q5SYE7 1610 aa21.75■■□□□ 1.07
SCNN1A-206ENST00000457871 MST1RQ04912 1400 aa21.72■■□□□ 1.07
SCNN1A-206ENST00000457871 XRN1Q8IZH2 1706 aaKnown RBP21.72■■□□□ 1.07
SCNN1A-206ENST00000457871 FAM50AQ14320 339 aaKnown RBP21.7■■□□□ 1.06
SCNN1A-206ENST00000457871 C8orf37Q96NL8 207 aa21.7■■□□□ 1.06
SCNN1A-206ENST00000457871 NRXN3Q9Y4C0 1643 aa21.69■■□□□ 1.06
SCNN1A-206ENST00000457871 RBM6P78332 1123 aaKnown RBP21.69■■□□□ 1.06
SCNN1A-206ENST00000457871 LRRC59Q96AG4 307 aaKnown RBP21.68■■□□□ 1.06
SCNN1A-206ENST00000457871 QTRT2Q9H974 415 aaKnown RBP21.68■■□□□ 1.06
SCNN1A-206ENST00000457871 IQGAP3Q86VI3 1631 aa21.67■■□□□ 1.06
SCNN1A-206ENST00000457871 PNPLA6Q8IY17 1366 aa21.67■■□□□ 1.06
SCNN1A-206ENST00000457871 SETBP1Q9Y6X0 1596 aa21.65■■□□□ 1.06
SCNN1A-206ENST00000457871 DDX17Q92841 729 aaKnown RBP21.65■■□□□ 1.06
SCNN1A-206ENST00000457871 ADGRL3Q9HAR2 1447 aa21.62■■□□□ 1.05
SCNN1A-206ENST00000457871 NALCNQ8IZF0 1738 aa21.61■■□□□ 1.05
SCNN1A-206ENST00000457871 METP08581 1390 aa21.61■■□□□ 1.05
SCNN1A-206ENST00000457871 ATAD2Q6PL18 1390 aa21.59■■□□□ 1.05
SCNN1A-206ENST00000457871 ADAMTS2O95450 1211 aa21.58■■□□□ 1.05
SCNN1A-206ENST00000457871 NGLY1Q96IV0 654 aa21.58■■□□□ 1.05
SCNN1A-206ENST00000457871 LAMC1P11047 1609 aa21.56■■□□□ 1.04
SCNN1A-206ENST00000457871 NUP155O75694 1391 aa21.56■■□□□ 1.04
SCNN1A-206ENST00000457871 ROCK1Q13464 1354 aa21.55■■□□□ 1.04
SCNN1A-206ENST00000457871 C1orf167Q5SNV9 1468 aa21.55■■□□□ 1.04
SCNN1A-206ENST00000457871 EP400Q96L91 3159 aa21.55■■□□□ 1.04
SCNN1A-206ENST00000457871 SPHKAPQ2M3C7 1700 aa21.54■■□□□ 1.04
SCNN1A-206ENST00000457871 USP21Q9UK80 565 aa21.53■■□□□ 1.04
SCNN1A-206ENST00000457871 ZNF326Q5BKZ1 582 aaKnown RBP21.52■■□□□ 1.04
SCNN1A-206ENST00000457871 TRPC5Q9UL62 973 aaPredicted RBP21.51■■□□□ 1.03
SCNN1A-206ENST00000457871 SOS2Q07890 1332 aaPredicted RBP21.51■■□□□ 1.03
SCNN1A-206ENST00000457871 NEXMIFQ5QGS0 1516 aa21.5■■□□□ 1.03
SCNN1A-206ENST00000457871 PTCH1Q13635 1447 aa21.49■■□□□ 1.03
SCNN1A-206ENST00000457871 ZRANB1Q9UGI0 708 aa21.49■■□□□ 1.03
SCNN1A-206ENST00000457871 ATRNO75882 1429 aa21.48■■□□□ 1.03
SCNN1A-206ENST00000457871 FNBP4Q8N3X1 1017 aaPredicted RBP21.48■■□□□ 1.03
SCNN1A-206ENST00000457871 FOXD1Q16676 465 aa21.47■■□□□ 1.03
SCNN1A-206ENST00000457871 ORAI2Q96SN7 254 aa21.47■■□□□ 1.03
SCNN1A-206ENST00000457871 COL22A1Q8NFW1 1626 aaPredicted RBP21.47■■□□□ 1.03
SCNN1A-206ENST00000457871 CLTCL1P53675 1640 aa21.45■■□□□ 1.02
SCNN1A-206ENST00000457871 ROBO2Q9HCK4 1378 aa21.43■■□□□ 1.02
SCNN1A-206ENST00000457871 MYOM2P54296 1465 aa21.42■■□□□ 1.02
SCNN1A-206ENST00000457871 BCL9LQ86UU0 1499 aa21.4■■□□□ 1.02
SCNN1A-206ENST00000457871 CCDC125Q86Z20 511 aa21.4■■□□□ 1.02
SCNN1A-206ENST00000457871 MARF1Q9Y4F3 1742 aaKnown RBP21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms