RNA–Protein interactions for RNA: ENST00000457226.2

SMARCA2-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-216ENST00000457226 ZFYVE9O95405 1425 aa20.38■□□□□ 0.85
SMARCA2-216ENST00000457226 PLEKHG1Q9ULL1 1385 aa20.38■□□□□ 0.85
SMARCA2-216ENST00000457226 RIMS2Q9UQ26 1411 aa20.37■□□□□ 0.85
SMARCA2-216ENST00000457226 E9PCH4 1651 aa20.37■□□□□ 0.85
SMARCA2-216ENST00000457226 TMEM131LA2VDJ0 1609 aa20.37■□□□□ 0.85
SMARCA2-216ENST00000457226 ALKQ9UM73 1620 aa20.37■□□□□ 0.85
SMARCA2-216ENST00000457226 NKTRP30414 1462 aaKnown RBP20.37■□□□□ 0.85
SMARCA2-216ENST00000457226 CHGAP10645 457 aaKnown RBP20.35■□□□□ 0.85
SMARCA2-216ENST00000457226 TMEM94Q12767 1356 aa20.34■□□□□ 0.85
SMARCA2-216ENST00000457226 PROSER2Q86WR7 435 aaPredicted RBP20.34■□□□□ 0.85
SMARCA2-216ENST00000457226 TBX22Q9Y458 520 aa20.32■□□□□ 0.84
SMARCA2-216ENST00000457226 NWD1Q149M9 1564 aa20.32■□□□□ 0.84
SMARCA2-216ENST00000457226 ILDR2Q71H61 639 aa20.31■□□□□ 0.84
SMARCA2-216ENST00000457226 SOCS7O14512 581 aa20.29■□□□□ 0.84
SMARCA2-216ENST00000457226 DIP2AQ14689 1571 aa20.29■□□□□ 0.84
SMARCA2-216ENST00000457226 FAM135BQ49AJ0 1406 aa20.28■□□□□ 0.84
SMARCA2-216ENST00000457226 MSH6P52701 1360 aa20.28■□□□□ 0.84
SMARCA2-216ENST00000457226 PIK3R4Q99570 1358 aa20.28■□□□□ 0.84
SMARCA2-216ENST00000457226 NAIPQ13075 1403 aa20.27■□□□□ 0.83
SMARCA2-216ENST00000457226 MED1Q15648 1581 aaPredicted RBP20.26■□□□□ 0.83
SMARCA2-216ENST00000457226 XIRP1Q702N8 1843 aaKnown RBP20.26■□□□□ 0.83
SMARCA2-216ENST00000457226 NCOA3Q9Y6Q9 1424 aa20.26■□□□□ 0.83
SMARCA2-216ENST00000457226 MYO5BQ9ULV0 1848 aa20.25■□□□□ 0.83
SMARCA2-216ENST00000457226 HFM1A2PYH4 1435 aa20.24■□□□□ 0.83
SMARCA2-216ENST00000457226 SPHKAPQ2M3C7 1700 aa20.23■□□□□ 0.83
SMARCA2-216ENST00000457226 ADAMTS13Q76LX8 1427 aa20.22■□□□□ 0.83
SMARCA2-216ENST00000457226 PHF23Q9BUL5 403 aaPredicted RBP20.21■□□□□ 0.83
SMARCA2-216ENST00000457226 TRPM2O94759 1503 aa20.21■□□□□ 0.83
SMARCA2-216ENST00000457226 CHD2O14647 1828 aaKnown RBP20.2■□□□□ 0.82
SMARCA2-216ENST00000457226 ZNF326Q5BKZ1 582 aaKnown RBP20.2■□□□□ 0.82
SMARCA2-216ENST00000457226 NUTM2DQ5VT03 806 aaPredicted RBP20.2■□□□□ 0.82
SMARCA2-216ENST00000457226 SENP3Q9H4L4 574 aaPredicted RBP20.2■□□□□ 0.82
SMARCA2-216ENST00000457226 SLAIN2Q9P270 581 aa20.19■□□□□ 0.82
SMARCA2-216ENST00000457226 C14orf37Q86TY3 774 aa20.18■□□□□ 0.82
SMARCA2-216ENST00000457226 TRIM52Q96A61 297 aa20.18■□□□□ 0.82
SMARCA2-216ENST00000457226 RBM33Q96EV2 1170 aaKnown RBP20.18■□□□□ 0.82
SMARCA2-216ENST00000457226 SETBP1Q9Y6X0 1596 aa20.16■□□□□ 0.82
SMARCA2-216ENST00000457226 CADPS2Q86UW7 1296 aa20.15■□□□□ 0.82
SMARCA2-216ENST00000457226 C19orf44Q9H6X5 657 aa20.15■□□□□ 0.82
SMARCA2-216ENST00000457226 ROBO1Q9Y6N7 1651 aa20.15■□□□□ 0.82
SMARCA2-216ENST00000457226 ACIN1Q9UKV3 1341 aaKnown RBP20.14■□□□□ 0.81
SMARCA2-216ENST00000457226 SLC4A1APQ9BWU0 796 aaKnown RBP20.14■□□□□ 0.81
SMARCA2-216ENST00000457226 AMOTL2Q9Y2J4 779 aa20.14■□□□□ 0.81
SMARCA2-216ENST00000457226 ATF3P18847 181 aa20.13■□□□□ 0.81
SMARCA2-216ENST00000457226 CLTCL1P53675 1640 aa20.12■□□□□ 0.81
SMARCA2-216ENST00000457226 VGFO15240 615 aaPredicted RBP20.11■□□□□ 0.81
SMARCA2-216ENST00000457226 RPGRIP1LQ68CZ1 1315 aa20.1■□□□□ 0.81
SMARCA2-216ENST00000457226 NEXMIFQ5QGS0 1516 aa20.09■□□□□ 0.81
SMARCA2-216ENST00000457226 DCCP43146 1447 aa20.09■□□□□ 0.81
SMARCA2-216ENST00000457226 KIF1BO60333 1816 aa20.07■□□□□ 0.8
SMARCA2-216ENST00000457226 NRXN3Q9Y4C0 1643 aa20.07■□□□□ 0.8
SMARCA2-216ENST00000457226 PTPRUQ92729 1446 aa20.07■□□□□ 0.8
SMARCA2-216ENST00000457226 XRN1Q8IZH2 1706 aaKnown RBP20.05■□□□□ 0.8
SMARCA2-216ENST00000457226 JCADQ9P266 1359 aa20.05■□□□□ 0.8
SMARCA2-216ENST00000457226 METP08581 1390 aa20.04■□□□□ 0.8
SMARCA2-216ENST00000457226 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.04■□□□□ 0.8
SMARCA2-216ENST00000457226 PHLPP1O60346 1717 aa20.02■□□□□ 0.8
SMARCA2-216ENST00000457226 CCDC144AA2RUR9 1427 aa20.01■□□□□ 0.79
SMARCA2-216ENST00000457226 ADGRL3Q9HAR2 1447 aa19.99■□□□□ 0.79
SMARCA2-216ENST00000457226 SPATA31A6Q5VVP1 1343 aa19.99■□□□□ 0.79
SMARCA2-216ENST00000457226 AHDC1Q5TGY3 1603 aaPredicted RBP19.98■□□□□ 0.79
SMARCA2-216ENST00000457226 MPHOSPH9Q99550 1183 aa19.98■□□□□ 0.79
SMARCA2-216ENST00000457226 PTCH1Q13635 1447 aa19.98■□□□□ 0.79
SMARCA2-216ENST00000457226 COL16A1Q07092 1604 aaPredicted RBP19.98■□□□□ 0.79
SMARCA2-216ENST00000457226 PRAG1Q86YV5 1406 aa19.96■□□□□ 0.79
SMARCA2-216ENST00000457226 BRINP3Q76B58 766 aa19.96■□□□□ 0.79
SMARCA2-216ENST00000457226 RGS17Q9UGC6 210 aaPredicted RBP19.95■□□□□ 0.78
SMARCA2-216ENST00000457226 ANKRD30BQ9BXX2 1392 aa19.95■□□□□ 0.78
SMARCA2-216ENST00000457226 MST1RQ04912 1400 aa19.94■□□□□ 0.78
SMARCA2-216ENST00000457226 SETD5Q9C0A6 1442 aa19.93■□□□□ 0.78
SMARCA2-216ENST00000457226 FOXD1Q16676 465 aa19.93■□□□□ 0.78
SMARCA2-216ENST00000457226 ASXL1Q8IXJ9 1541 aa19.92■□□□□ 0.78
SMARCA2-216ENST00000457226 PPLO60437 1756 aa19.91■□□□□ 0.78
SMARCA2-216ENST00000457226 SPATA31E1Q6ZUB1 1445 aa19.91■□□□□ 0.78
SMARCA2-216ENST00000457226 LRRC59Q96AG4 307 aaKnown RBP19.89■□□□□ 0.77
SMARCA2-216ENST00000457226 SETD1AO15047 1707 aaKnown RBP19.88■□□□□ 0.77
SMARCA2-216ENST00000457226 SHPRHQ149N8 1683 aa19.88■□□□□ 0.77
SMARCA2-216ENST00000457226 ROBO2Q9HCK4 1378 aa19.88■□□□□ 0.77
SMARCA2-216ENST00000457226 RGL3Q3MIN7 710 aa19.88■□□□□ 0.77
SMARCA2-216ENST00000457226 MEX3CQ5U5Q3 659 aaKnown RBP19.88■□□□□ 0.77
SMARCA2-216ENST00000457226 NALCNQ8IZF0 1738 aa19.88■□□□□ 0.77
SMARCA2-216ENST00000457226 ZNF772Q68DY9 489 aaPredicted RBP19.85■□□□□ 0.77
SMARCA2-216ENST00000457226 POTEAQ6S8J7 498 aa19.85■□□□□ 0.77
SMARCA2-216ENST00000457226 C1orf167Q5SNV9 1468 aa19.85■□□□□ 0.77
SMARCA2-216ENST00000457226 NHSL1Q5SYE7 1610 aa19.84■□□□□ 0.77
SMARCA2-216ENST00000457226 ADGRF5Q8IZF2 1346 aa19.84■□□□□ 0.77
SMARCA2-216ENST00000457226 RAB3GAP2Q9H2M9 1393 aa19.83■□□□□ 0.76
SMARCA2-216ENST00000457226 LRP6O75581 1613 aa19.82■□□□□ 0.76
SMARCA2-216ENST00000457226 TECPR2O15040 1411 aa19.82■□□□□ 0.76
SMARCA2-216ENST00000457226 PIK3C2GO75747 1445 aa19.82■□□□□ 0.76
SMARCA2-216ENST00000457226 LRPPRCP42704 1394 aaKnown RBP19.82■□□□□ 0.76
SMARCA2-216ENST00000457226 ABCC11Q96J66 1382 aa19.81■□□□□ 0.76
SMARCA2-216ENST00000457226 IFT172Q9UG01 1749 aa19.8■□□□□ 0.76
SMARCA2-216ENST00000457226 CDC42BPGQ6DT37 1551 aa19.79■□□□□ 0.76
SMARCA2-216ENST00000457226 HRCP23327 699 aa19.79■□□□□ 0.76
SMARCA2-216ENST00000457226 LAMC1P11047 1609 aa19.78■□□□□ 0.76
SMARCA2-216ENST00000457226 NUTM2BA6NNL0 878 aaPredicted RBP19.78■□□□□ 0.76
SMARCA2-216ENST00000457226 NUTM2EB1AL46 878 aaPredicted RBP19.78■□□□□ 0.76
SMARCA2-216ENST00000457226 NUTM2AQ8IVF1 878 aaPredicted RBP19.78■□□□□ 0.76
SMARCA2-216ENST00000457226 SIRT1Q96EB6 747 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms