RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 TXNDC2Q86VQ3 553 aa20.76■□□□□ 0.91
SMPD4-215ENST00000457039 DMRT2Q9Y5R5 561 aa20.76■□□□□ 0.91
SMPD4-215ENST00000457039 NPHP4O75161 1426 aaPredicted RBP20.74■□□□□ 0.91
SMPD4-215ENST00000457039 EID1Q9Y6B2 187 aa20.74■□□□□ 0.91
SMPD4-215ENST00000457039 NEXMIFQ5QGS0 1516 aa20.73■□□□□ 0.91
SMPD4-215ENST00000457039 IQGAP1P46940 1657 aa20.71■□□□□ 0.91
SMPD4-215ENST00000457039 HDGFP51858 240 aaKnown RBP20.7■□□□□ 0.9
SMPD4-215ENST00000457039 ZNF326Q5BKZ1 582 aaKnown RBP20.7■□□□□ 0.9
SMPD4-215ENST00000457039 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.7■□□□□ 0.9
SMPD4-215ENST00000457039 RPGRIP1LQ68CZ1 1315 aa20.69■□□□□ 0.9
SMPD4-215ENST00000457039 PLEKHG1Q9ULL1 1385 aa20.69■□□□□ 0.9
SMPD4-215ENST00000457039 NUTM2DQ5VT03 806 aaPredicted RBP20.67■□□□□ 0.9
SMPD4-215ENST00000457039 PPLO60437 1756 aa20.66■□□□□ 0.9
SMPD4-215ENST00000457039 PPP1R15AO75807 674 aaPredicted RBP20.65■□□□□ 0.9
SMPD4-215ENST00000457039 RGL3Q3MIN7 710 aa20.65■□□□□ 0.9
SMPD4-215ENST00000457039 IFT172Q9UG01 1749 aa20.64■□□□□ 0.9
SMPD4-215ENST00000457039 ADAMTS13Q76LX8 1427 aa20.62■□□□□ 0.89
SMPD4-215ENST00000457039 SETBP1Q9Y6X0 1596 aa20.62■□□□□ 0.89
SMPD4-215ENST00000457039 NRXN3Q9Y4C0 1643 aa20.61■□□□□ 0.89
SMPD4-215ENST00000457039 VGFO15240 615 aaPredicted RBP20.61■□□□□ 0.89
SMPD4-215ENST00000457039 SIN3AQ96ST3 1273 aa20.59■□□□□ 0.89
SMPD4-215ENST00000457039 ZNF335Q9H4Z2 1342 aaPredicted RBP20.58■□□□□ 0.89
SMPD4-215ENST00000457039 MYOM2P54296 1465 aa20.58■□□□□ 0.89
SMPD4-215ENST00000457039 LTBP4Q8N2S1 1624 aa20.58■□□□□ 0.89
SMPD4-215ENST00000457039 SLC26A8Q96RN1 970 aa20.58■□□□□ 0.89
SMPD4-215ENST00000457039 DIP2AQ14689 1571 aa20.58■□□□□ 0.88
SMPD4-215ENST00000457039 ADGRF5Q8IZF2 1346 aa20.57■□□□□ 0.88
SMPD4-215ENST00000457039 TBX22Q9Y458 520 aa20.57■□□□□ 0.88
SMPD4-215ENST00000457039 NRXN1Q9ULB1 1477 aa20.56■□□□□ 0.88
SMPD4-215ENST00000457039 SENP3Q9H4L4 574 aaPredicted RBP20.56■□□□□ 0.88
SMPD4-215ENST00000457039 BCANQ96GW7 911 aa20.55■□□□□ 0.88
SMPD4-215ENST00000457039 PIK3C2GO75747 1445 aa20.54■□□□□ 0.88
SMPD4-215ENST00000457039 SETD1AO15047 1707 aaKnown RBP20.53■□□□□ 0.88
SMPD4-215ENST00000457039 STRCP1A6NGW2 1772 aa20.52■□□□□ 0.88
SMPD4-215ENST00000457039 PIK3R4Q99570 1358 aa20.52■□□□□ 0.88
SMPD4-215ENST00000457039 NWD1Q149M9 1564 aa20.51■□□□□ 0.87
SMPD4-215ENST00000457039 NEUROD1Q13562 356 aa20.51■□□□□ 0.87
SMPD4-215ENST00000457039 DCAF11Q8TEB1 546 aa20.51■□□□□ 0.87
SMPD4-215ENST00000457039 STAC3Q96MF2 364 aa20.51■□□□□ 0.87
SMPD4-215ENST00000457039 ALKQ9UM73 1620 aa20.51■□□□□ 0.87
SMPD4-215ENST00000457039 CLSPNQ9HAW4 1339 aa20.51■□□□□ 0.87
SMPD4-215ENST00000457039 METP08581 1390 aa20.49■□□□□ 0.87
SMPD4-215ENST00000457039 CPS1P31327 1500 aa20.49■□□□□ 0.87
SMPD4-215ENST00000457039 KCNA6P17658 529 aa20.49■□□□□ 0.87
SMPD4-215ENST00000457039 CHD2O14647 1828 aaKnown RBP20.48■□□□□ 0.87
SMPD4-215ENST00000457039 PTPRUQ92729 1446 aa20.48■□□□□ 0.87
SMPD4-215ENST00000457039 L3MBTL2Q969R5 705 aa20.47■□□□□ 0.87
SMPD4-215ENST00000457039 KDM2AQ9Y2K7 1162 aa20.47■□□□□ 0.87
SMPD4-215ENST00000457039 C14orf93Q9H972 538 aaKnown RBP20.45■□□□□ 0.86
SMPD4-215ENST00000457039 NKTRP30414 1462 aaKnown RBP20.44■□□□□ 0.86
SMPD4-215ENST00000457039 ASXL1Q8IXJ9 1541 aa20.44■□□□□ 0.86
SMPD4-215ENST00000457039 XRN1Q8IZH2 1706 aaKnown RBP20.44■□□□□ 0.86
SMPD4-215ENST00000457039 LRRC7Q96NW7 1537 aa20.43■□□□□ 0.86
SMPD4-215ENST00000457039 LAMC1P11047 1609 aa20.43■□□□□ 0.86
SMPD4-215ENST00000457039 CERKQ8TCT0 537 aa20.43■□□□□ 0.86
SMPD4-215ENST00000457039 CFAP70Q5T0N1 1121 aa20.42■□□□□ 0.86
SMPD4-215ENST00000457039 PRAG1Q86YV5 1406 aa20.42■□□□□ 0.86
SMPD4-215ENST00000457039 CCER1Q8TC90 406 aaPredicted RBP20.41■□□□□ 0.86
SMPD4-215ENST00000457039 AMOTL2Q9Y2J4 779 aa20.41■□□□□ 0.86
SMPD4-215ENST00000457039 IQSEC2Q5JU85 1478 aa20.41■□□□□ 0.86
SMPD4-215ENST00000457039 TONSLQ96HA7 1378 aa20.4■□□□□ 0.86
SMPD4-215ENST00000457039 ADGRB1O14514 1584 aa20.39■□□□□ 0.85
SMPD4-215ENST00000457039 XIRP1Q702N8 1843 aaKnown RBP20.37■□□□□ 0.85
SMPD4-215ENST00000457039 TECPR2O15040 1411 aa20.36■□□□□ 0.85
SMPD4-215ENST00000457039 KIAA1210Q9ULL0 1709 aa20.36■□□□□ 0.85
SMPD4-215ENST00000457039 LRPPRCP42704 1394 aaKnown RBP20.36■□□□□ 0.85
SMPD4-215ENST00000457039 TMEM132EQ6IEE7 984 aa20.36■□□□□ 0.85
SMPD4-215ENST00000457039 PTCH1Q13635 1447 aa20.36■□□□□ 0.85
SMPD4-215ENST00000457039 TMEM94Q12767 1356 aa20.35■□□□□ 0.85
SMPD4-215ENST00000457039 PROSER2Q86WR7 435 aaPredicted RBP20.35■□□□□ 0.85
SMPD4-215ENST00000457039 YTHDC2Q9H6S0 1430 aaKnown RBP20.35■□□□□ 0.85
SMPD4-215ENST00000457039 ABCC11Q96J66 1382 aa20.34■□□□□ 0.85
SMPD4-215ENST00000457039 KNDC1Q76NI1 1749 aa20.33■□□□□ 0.85
SMPD4-215ENST00000457039 NCOA3Q9Y6Q9 1424 aa20.33■□□□□ 0.84
SMPD4-215ENST00000457039 ROBO2Q9HCK4 1378 aa20.33■□□□□ 0.84
SMPD4-215ENST00000457039 RBM33Q96EV2 1170 aaKnown RBP20.32■□□□□ 0.84
SMPD4-215ENST00000457039 TIMELESSQ9UNS1 1208 aa20.32■□□□□ 0.84
SMPD4-215ENST00000457039 NBPF8Q3BBV2 869 aa20.31■□□□□ 0.84
SMPD4-215ENST00000457039 TRPM1Q7Z4N2 1603 aa20.3■□□□□ 0.84
SMPD4-215ENST00000457039 NBPF1Q3BBV0 1214 aa20.29■□□□□ 0.84
SMPD4-215ENST00000457039 STK26Q9P289 416 aa20.29■□□□□ 0.84
SMPD4-215ENST00000457039 DLC1Q96QB1 1528 aa20.28■□□□□ 0.84
SMPD4-215ENST00000457039 SIRT1Q96EB6 747 aa20.28■□□□□ 0.84
SMPD4-215ENST00000457039 FAM135BQ49AJ0 1406 aa20.27■□□□□ 0.83
SMPD4-215ENST00000457039 PLEKHH1Q9ULM0 1364 aa20.24■□□□□ 0.83
SMPD4-215ENST00000457039 ADGRL3Q9HAR2 1447 aa20.24■□□□□ 0.83
SMPD4-215ENST00000457039 RALGAPBQ86X10 1494 aa20.24■□□□□ 0.83
SMPD4-215ENST00000457039 MSH6P52701 1360 aa20.23■□□□□ 0.83
SMPD4-215ENST00000457039 GPRASP1Q5JY77 1395 aa20.23■□□□□ 0.83
SMPD4-215ENST00000457039 NALCNQ8IZF0 1738 aa20.23■□□□□ 0.83
SMPD4-215ENST00000457039 WAPLQ7Z5K2 1190 aa20.22■□□□□ 0.83
SMPD4-215ENST00000457039 C19orf44Q9H6X5 657 aa20.22■□□□□ 0.83
SMPD4-215ENST00000457039 TRAK1Q9UPV9 953 aa20.22■□□□□ 0.83
SMPD4-215ENST00000457039 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.22■□□□□ 0.83
SMPD4-215ENST00000457039 DCCP43146 1447 aa20.21■□□□□ 0.83
SMPD4-215ENST00000457039 ARHGEF28Q8N1W1 1705 aaKnown RBP20.21■□□□□ 0.83
SMPD4-215ENST00000457039 ROCK2O75116 1388 aaKnown RBP20.21■□□□□ 0.83
SMPD4-215ENST00000457039 C14orf37Q86TY3 774 aa20.2■□□□□ 0.82
SMPD4-215ENST00000457039 PRAM1Q96QH2 718 aa20.2■□□□□ 0.82
SMPD4-215ENST00000457039 UBAP1LF5GYI3 381 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms