RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 FOXD4L1Q9NU39 408 aa14.9□□□□□ -0.02
ATG4A-206ENST00000457035 UBR1Q8IWV7 1749 aa14.89□□□□□ -0.03
ATG4A-206ENST00000457035 PIK3C2BO00750 1634 aa14.89□□□□□ -0.03
ATG4A-206ENST00000457035 MYCNP04198 464 aaPredicted RBP14.88□□□□□ -0.03
ATG4A-206ENST00000457035 SPINK5Q9NQ38 1064 aaPredicted RBP14.88□□□□□ -0.03
ATG4A-206ENST00000457035 MYO5BQ9ULV0 1848 aa14.87□□□□□ -0.03
ATG4A-206ENST00000457035 IQSEC2Q5JU85 1478 aa14.87□□□□□ -0.03
ATG4A-206ENST00000457035 KDM5AP29375 1690 aaKnown RBP14.87□□□□□ -0.03
ATG4A-206ENST00000457035 STAG3Q9UJ98 1225 aa14.86□□□□□ -0.03
ATG4A-206ENST00000457035 ZNF335Q9H4Z2 1342 aaPredicted RBP14.86□□□□□ -0.03
ATG4A-206ENST00000457035 DISP3Q9P2K9 1392 aa14.85□□□□□ -0.03
ATG4A-206ENST00000457035 TRPM2O94759 1503 aa14.84□□□□□ -0.03
ATG4A-206ENST00000457035 SAMD1Q6SPF0 538 aaPredicted RBP14.84□□□□□ -0.03
ATG4A-206ENST00000457035 ANKLE2Q86XL3 938 aa14.84□□□□□ -0.03
ATG4A-206ENST00000457035 TMEM131LA2VDJ0 1609 aa14.84□□□□□ -0.03
ATG4A-206ENST00000457035 ARHGAP23Q9P227 1491 aa14.82□□□□□ -0.04
ATG4A-206ENST00000457035 SLIT1O75093 1534 aa14.82□□□□□ -0.04
ATG4A-206ENST00000457035 CLTCL1P53675 1640 aa14.82□□□□□ -0.04
ATG4A-206ENST00000457035 CAPN15O75808 1086 aa14.82□□□□□ -0.04
ATG4A-206ENST00000457035 CHGAP10645 457 aaKnown RBP14.82□□□□□ -0.04
ATG4A-206ENST00000457035 LTKP29376 864 aa14.82□□□□□ -0.04
ATG4A-206ENST00000457035 KIF1BO60333 1816 aa14.82□□□□□ -0.04
ATG4A-206ENST00000457035 TMEM2Q9UHN6 1383 aa14.82□□□□□ -0.04
ATG4A-206ENST00000457035 ADGRB3O60242 1522 aa14.82□□□□□ -0.04
ATG4A-206ENST00000457035 TXNDC2Q86VQ3 553 aa14.81□□□□□ -0.04
ATG4A-206ENST00000457035 PCGF6Q9BYE7 350 aa14.81□□□□□ -0.04
ATG4A-206ENST00000457035 ANKRD30BQ9BXX2 1392 aa14.81□□□□□ -0.04
ATG4A-206ENST00000457035 NEURL4Q96JN8 1562 aa14.81□□□□□ -0.04
ATG4A-206ENST00000457035 MED14O60244 1454 aa14.78□□□□□ -0.04
ATG4A-206ENST00000457035 UBAP1LF5GYI3 381 aa14.78□□□□□ -0.04
ATG4A-206ENST00000457035 EID1Q9Y6B2 187 aa14.78□□□□□ -0.04
ATG4A-206ENST00000457035 ZFYVE9O95405 1425 aa14.77□□□□□ -0.04
ATG4A-206ENST00000457035 ZBTB22O15209 634 aa14.77□□□□□ -0.05
ATG4A-206ENST00000457035 ILDR2Q71H61 639 aa14.77□□□□□ -0.05
ATG4A-206ENST00000457035 CCDC144AA2RUR9 1427 aa14.76□□□□□ -0.05
ATG4A-206ENST00000457035 HDGFP51858 240 aaKnown RBP14.76□□□□□ -0.05
ATG4A-206ENST00000457035 IQGAP1P46940 1657 aa14.76□□□□□ -0.05
ATG4A-206ENST00000457035 SCAF11Q99590 1463 aaKnown RBP14.76□□□□□ -0.05
ATG4A-206ENST00000457035 RIMS2Q9UQ26 1411 aa14.75□□□□□ -0.05
ATG4A-206ENST00000457035 NPHP4O75161 1426 aaPredicted RBP14.75□□□□□ -0.05
ATG4A-206ENST00000457035 ZNF326Q5BKZ1 582 aaKnown RBP14.74□□□□□ -0.05
ATG4A-206ENST00000457035 NUTM2DQ5VT03 806 aaPredicted RBP14.74□□□□□ -0.05
ATG4A-206ENST00000457035 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.74□□□□□ -0.05
ATG4A-206ENST00000457035 SPATA31E1Q6ZUB1 1445 aa14.74□□□□□ -0.05
ATG4A-206ENST00000457035 DHX57Q6P158 1386 aaKnown RBP14.73□□□□□ -0.05
ATG4A-206ENST00000457035 STRCP1A6NGW2 1772 aa14.73□□□□□ -0.05
ATG4A-206ENST00000457035 CPS1P31327 1500 aa14.72□□□□□ -0.05
ATG4A-206ENST00000457035 RPGRIP1LQ68CZ1 1315 aa14.72□□□□□ -0.05
ATG4A-206ENST00000457035 RGL3Q3MIN7 710 aa14.71□□□□□ -0.05
ATG4A-206ENST00000457035 DSG3P32926 999 aa14.7□□□□□ -0.06
ATG4A-206ENST00000457035 NEXMIFQ5QGS0 1516 aa14.7□□□□□ -0.06
ATG4A-206ENST00000457035 PLEKHG1Q9ULL1 1385 aa14.7□□□□□ -0.06
ATG4A-206ENST00000457035 PPP1R15AO75807 674 aaPredicted RBP14.69□□□□□ -0.06
ATG4A-206ENST00000457035 ZNF219Q9P2Y4 722 aaPredicted RBP14.69□□□□□ -0.06
ATG4A-206ENST00000457035 PPLO60437 1756 aa14.69□□□□□ -0.06
ATG4A-206ENST00000457035 VGFO15240 615 aaPredicted RBP14.68□□□□□ -0.06
ATG4A-206ENST00000457035 PIP4K2BP78356 416 aa14.68□□□□□ -0.06
ATG4A-206ENST00000457035 SLC26A8Q96RN1 970 aa14.68□□□□□ -0.06
ATG4A-206ENST00000457035 BCANQ96GW7 911 aa14.66□□□□□ -0.06
ATG4A-206ENST00000457035 SIN3AQ96ST3 1273 aa14.66□□□□□ -0.06
ATG4A-206ENST00000457035 TBX22Q9Y458 520 aa14.66□□□□□ -0.06
ATG4A-206ENST00000457035 SOCS7O14512 581 aa14.65□□□□□ -0.06
ATG4A-206ENST00000457035 IFT172Q9UG01 1749 aa14.65□□□□□ -0.06
ATG4A-206ENST00000457035 ADAMTS13Q76LX8 1427 aa14.65□□□□□ -0.06
ATG4A-206ENST00000457035 ADGRF5Q8IZF2 1346 aa14.64□□□□□ -0.07
ATG4A-206ENST00000457035 NRXN3Q9Y4C0 1643 aa14.63□□□□□ -0.07
ATG4A-206ENST00000457035 TOM1O60784 492 aa14.63□□□□□ -0.07
ATG4A-206ENST00000457035 XIRP1Q702N8 1843 aaKnown RBP14.63□□□□□ -0.07
ATG4A-206ENST00000457035 CHD2O14647 1828 aaKnown RBP14.62□□□□□ -0.07
ATG4A-206ENST00000457035 HSPA1LP34931 641 aa14.62□□□□□ -0.07
ATG4A-206ENST00000457035 MED1Q15648 1581 aaPredicted RBP14.62□□□□□ -0.07
ATG4A-206ENST00000457035 SETBP1Q9Y6X0 1596 aa14.62□□□□□ -0.07
ATG4A-206ENST00000457035 ALKQ9UM73 1620 aa14.62□□□□□ -0.07
ATG4A-206ENST00000457035 KCNA6P17658 529 aa14.61□□□□□ -0.07
ATG4A-206ENST00000457035 NEUROD1Q13562 356 aa14.6□□□□□ -0.07
ATG4A-206ENST00000457035 DCAF11Q8TEB1 546 aa14.6□□□□□ -0.07
ATG4A-206ENST00000457035 STAC3Q96MF2 364 aa14.6□□□□□ -0.07
ATG4A-206ENST00000457035 KDM2AQ9Y2K7 1162 aa14.59□□□□□ -0.07
ATG4A-206ENST00000457035 LRRC7Q96NW7 1537 aa14.59□□□□□ -0.07
ATG4A-206ENST00000457035 DIP2AQ14689 1571 aa14.58□□□□□ -0.08
ATG4A-206ENST00000457035 METP08581 1390 aa14.58□□□□□ -0.08
ATG4A-206ENST00000457035 PIK3R4Q99570 1358 aa14.58□□□□□ -0.08
ATG4A-206ENST00000457035 NRXN1Q9ULB1 1477 aa14.57□□□□□ -0.08
ATG4A-206ENST00000457035 L3MBTL2Q969R5 705 aa14.57□□□□□ -0.08
ATG4A-206ENST00000457035 SETD1AO15047 1707 aaKnown RBP14.57□□□□□ -0.08
ATG4A-206ENST00000457035 MYOM2P54296 1465 aa14.57□□□□□ -0.08
ATG4A-206ENST00000457035 C14orf93Q9H972 538 aaKnown RBP14.56□□□□□ -0.08
ATG4A-206ENST00000457035 PIK3C2GO75747 1445 aa14.56□□□□□ -0.08
ATG4A-206ENST00000457035 PTPRUQ92729 1446 aa14.56□□□□□ -0.08
ATG4A-206ENST00000457035 AMOTL2Q9Y2J4 779 aa14.55□□□□□ -0.08
ATG4A-206ENST00000457035 CFAP70Q5T0N1 1121 aa14.54□□□□□ -0.08
ATG4A-206ENST00000457035 NWD1Q149M9 1564 aa14.53□□□□□ -0.08
ATG4A-206ENST00000457035 CLSPNQ9HAW4 1339 aa14.53□□□□□ -0.08
ATG4A-206ENST00000457035 TMEM132EQ6IEE7 984 aa14.52□□□□□ -0.09
ATG4A-206ENST00000457035 PROSER2Q86WR7 435 aaPredicted RBP14.52□□□□□ -0.09
ATG4A-206ENST00000457035 CCER1Q8TC90 406 aaPredicted RBP14.5□□□□□ -0.09
ATG4A-206ENST00000457035 RBM33Q96EV2 1170 aaKnown RBP14.5□□□□□ -0.09
ATG4A-206ENST00000457035 NKTRP30414 1462 aaKnown RBP14.5□□□□□ -0.09
ATG4A-206ENST00000457035 XRN1Q8IZH2 1706 aaKnown RBP14.49□□□□□ -0.09
ATG4A-206ENST00000457035 ABCB7O75027 752 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms