RNA–Protein interactions for RNA: ENST00000456957.2

PKNOX1-204, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 3

Gene PKNOX1, Length 569 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-204ENST00000456957 TONSLQ96HA7 1378 aa23.44■■□□□ 1.34
PKNOX1-204ENST00000456957 ZNF326Q5BKZ1 582 aaKnown RBP23.44■■□□□ 1.34
PKNOX1-204ENST00000456957 TMEM2Q9UHN6 1383 aa23.43■■□□□ 1.34
PKNOX1-204ENST00000456957 THEMISQ8N1K5 641 aaPredicted RBP23.43■■□□□ 1.34
PKNOX1-204ENST00000456957 RIMS2Q9UQ26 1411 aa23.42■■□□□ 1.34
PKNOX1-204ENST00000456957 RPGRIP1LQ68CZ1 1315 aa23.4■■□□□ 1.34
PKNOX1-204ENST00000456957 L3MBTL2Q969R5 705 aa23.4■■□□□ 1.34
PKNOX1-204ENST00000456957 MYOM2P54296 1465 aa23.39■■□□□ 1.34
PKNOX1-204ENST00000456957 HSPA2P54652 639 aa23.36■■□□□ 1.33
PKNOX1-204ENST00000456957 DCAF11Q8TEB1 546 aa23.36■■□□□ 1.33
PKNOX1-204ENST00000456957 SCAF11Q99590 1463 aaKnown RBP23.36■■□□□ 1.33
PKNOX1-204ENST00000456957 STRCQ7RTU9 1775 aa23.35■■□□□ 1.33
PKNOX1-204ENST00000456957 IQGAP1P46940 1657 aa23.35■■□□□ 1.33
PKNOX1-204ENST00000456957 NUTM2DQ5VT03 806 aaPredicted RBP23.34■■□□□ 1.33
PKNOX1-204ENST00000456957 TIMELESSQ9UNS1 1208 aa23.34■■□□□ 1.33
PKNOX1-204ENST00000456957 NRXN1Q9ULB1 1477 aa23.34■■□□□ 1.33
PKNOX1-204ENST00000456957 LTKP29376 864 aa23.33■■□□□ 1.33
PKNOX1-204ENST00000456957 NRXN3Q9Y4C0 1643 aa23.33■■□□□ 1.32
PKNOX1-204ENST00000456957 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.32■■□□□ 1.32
PKNOX1-204ENST00000456957 KDM2AQ9Y2K7 1162 aa23.32■■□□□ 1.32
PKNOX1-204ENST00000456957 TXNDC2Q86VQ3 553 aa23.31■■□□□ 1.32
PKNOX1-204ENST00000456957 PPP1R15AO75807 674 aaPredicted RBP23.3■■□□□ 1.32
PKNOX1-204ENST00000456957 EID1Q9Y6B2 187 aa23.3■■□□□ 1.32
PKNOX1-204ENST00000456957 SETBP1Q9Y6X0 1596 aa23.3■■□□□ 1.32
PKNOX1-204ENST00000456957 ADGRF5Q8IZF2 1346 aa23.3■■□□□ 1.32
PKNOX1-204ENST00000456957 SETD1AO15047 1707 aaKnown RBP23.29■■□□□ 1.32
PKNOX1-204ENST00000456957 VGFO15240 615 aaPredicted RBP23.29■■□□□ 1.32
PKNOX1-204ENST00000456957 PIK3C2GO75747 1445 aa23.29■■□□□ 1.32
PKNOX1-204ENST00000456957 HDGFP51858 240 aaKnown RBP23.29■■□□□ 1.32
PKNOX1-204ENST00000456957 PRAG1Q86YV5 1406 aa23.29■■□□□ 1.32
PKNOX1-204ENST00000456957 ANKLE2Q86XL3 938 aa23.28■■□□□ 1.32
PKNOX1-204ENST00000456957 LAMC1P11047 1609 aa23.28■■□□□ 1.32
PKNOX1-204ENST00000456957 MED14O60244 1454 aa23.28■■□□□ 1.32
PKNOX1-204ENST00000456957 PLEKHG1Q9ULL1 1385 aa23.27■■□□□ 1.32
PKNOX1-204ENST00000456957 TRPM1Q7Z4N2 1603 aa23.27■■□□□ 1.32
PKNOX1-204ENST00000456957 STAC3Q96MF2 364 aa23.27■■□□□ 1.32
PKNOX1-204ENST00000456957 KIAA1210Q9ULL0 1709 aa23.27■■□□□ 1.32
PKNOX1-204ENST00000456957 NCKAP5LQ9HCH0 1330 aa23.26■■□□□ 1.31
PKNOX1-204ENST00000456957 NPHP4O75161 1426 aaPredicted RBP23.24■■□□□ 1.31
PKNOX1-204ENST00000456957 ALKQ9UM73 1620 aa23.23■■□□□ 1.31
PKNOX1-204ENST00000456957 SENP3Q9H4L4 574 aaPredicted RBP23.23■■□□□ 1.31
PKNOX1-204ENST00000456957 DIP2AQ14689 1571 aa23.23■■□□□ 1.31
PKNOX1-204ENST00000456957 NBPF8Q3BBV2 869 aa23.21■■□□□ 1.31
PKNOX1-204ENST00000456957 ADAMTS13Q76LX8 1427 aa23.21■■□□□ 1.31
PKNOX1-204ENST00000456957 ASXL1Q8IXJ9 1541 aa23.18■■□□□ 1.3
PKNOX1-204ENST00000456957 DMRT2Q9Y5R5 561 aa23.18■■□□□ 1.3
PKNOX1-204ENST00000456957 RALGAPBQ86X10 1494 aa23.17■■□□□ 1.3
PKNOX1-204ENST00000456957 BCANQ96GW7 911 aa23.17■■□□□ 1.3
PKNOX1-204ENST00000456957 ZEB1P37275 1124 aaPredicted RBP23.16■■□□□ 1.3
PKNOX1-204ENST00000456957 CERKQ8TCT0 537 aa23.16■■□□□ 1.3
PKNOX1-204ENST00000456957 ADGRB1O14514 1584 aa23.15■■□□□ 1.3
PKNOX1-204ENST00000456957 CFAP70Q5T0N1 1121 aa23.15■■□□□ 1.3
PKNOX1-204ENST00000456957 C14orf93Q9H972 538 aaKnown RBP23.15■■□□□ 1.3
PKNOX1-204ENST00000456957 SLC26A8Q96RN1 970 aa23.14■■□□□ 1.29
PKNOX1-204ENST00000456957 CHD2O14647 1828 aaKnown RBP23.12■■□□□ 1.29
PKNOX1-204ENST00000456957 TBX22Q9Y458 520 aa23.1■■□□□ 1.29
PKNOX1-204ENST00000456957 METP08581 1390 aa23.1■■□□□ 1.29
PKNOX1-204ENST00000456957 KNDC1Q76NI1 1749 aa23.1■■□□□ 1.29
PKNOX1-204ENST00000456957 XRN1Q8IZH2 1706 aaKnown RBP23.09■■□□□ 1.29
PKNOX1-204ENST00000456957 NBPF1Q3BBV0 1214 aa23.09■■□□□ 1.29
PKNOX1-204ENST00000456957 ROCK2O75116 1388 aaKnown RBP23.08■■□□□ 1.29
PKNOX1-204ENST00000456957 STRCP1A6NGW2 1772 aa23.07■■□□□ 1.28
PKNOX1-204ENST00000456957 GPRASP1Q5JY77 1395 aa23.07■■□□□ 1.28
PKNOX1-204ENST00000456957 NWD1Q149M9 1564 aa23.06■■□□□ 1.28
PKNOX1-204ENST00000456957 ARHGEF28Q8N1W1 1705 aaKnown RBP23.06■■□□□ 1.28
PKNOX1-204ENST00000456957 TMEM132EQ6IEE7 984 aa23.06■■□□□ 1.28
PKNOX1-204ENST00000456957 PTPRUQ92729 1446 aa23.05■■□□□ 1.28
PKNOX1-204ENST00000456957 PIK3R4Q99570 1358 aa23.04■■□□□ 1.28
PKNOX1-204ENST00000456957 YTHDC2Q9H6S0 1430 aaKnown RBP23.04■■□□□ 1.28
PKNOX1-204ENST00000456957 CPS1P31327 1500 aa23.02■■□□□ 1.28
PKNOX1-204ENST00000456957 LRPPRCP42704 1394 aaKnown RBP23.01■■□□□ 1.27
PKNOX1-204ENST00000456957 TECPR2O15040 1411 aa22.99■■□□□ 1.27
PKNOX1-204ENST00000456957 DLC1Q96QB1 1528 aa22.99■■□□□ 1.27
PKNOX1-204ENST00000456957 CARD11Q9BXL7 1154 aa22.99■■□□□ 1.27
PKNOX1-204ENST00000456957 STK26Q9P289 416 aa22.97■■□□□ 1.27
PKNOX1-204ENST00000456957 AMOTL2Q9Y2J4 779 aa22.96■■□□□ 1.27
PKNOX1-204ENST00000456957 ABCC11Q96J66 1382 aa22.96■■□□□ 1.27
PKNOX1-204ENST00000456957 NKTRP30414 1462 aaKnown RBP22.95■■□□□ 1.26
PKNOX1-204ENST00000456957 PTCH1Q13635 1447 aa22.95■■□□□ 1.26
PKNOX1-204ENST00000456957 QRICH2Q9H0J4 1663 aa22.95■■□□□ 1.26
PKNOX1-204ENST00000456957 KCNA6P17658 529 aa22.94■■□□□ 1.26
PKNOX1-204ENST00000456957 TRAK1Q9UPV9 953 aa22.94■■□□□ 1.26
PKNOX1-204ENST00000456957 USP47Q96K76 1375 aa22.93■■□□□ 1.26
PKNOX1-204ENST00000456957 ZNF335Q9H4Z2 1342 aaPredicted RBP22.93■■□□□ 1.26
PKNOX1-204ENST00000456957 ROBO2Q9HCK4 1378 aa22.92■■□□□ 1.26
PKNOX1-204ENST00000456957 XIRP1Q702N8 1843 aaKnown RBP22.92■■□□□ 1.26
PKNOX1-204ENST00000456957 FAM135BQ49AJ0 1406 aa22.9■■□□□ 1.26
PKNOX1-204ENST00000456957 EIF3AQ14152 1382 aaKnown RBP22.89■■□□□ 1.26
PKNOX1-204ENST00000456957 LTBP4Q8N2S1 1624 aa22.89■■□□□ 1.25
PKNOX1-204ENST00000456957 PLEKHH1Q9ULM0 1364 aa22.89■■□□□ 1.25
PKNOX1-204ENST00000456957 NALCNQ8IZF0 1738 aa22.88■■□□□ 1.25
PKNOX1-204ENST00000456957 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.88■■□□□ 1.25
PKNOX1-204ENST00000456957 SIRT1Q96EB6 747 aa22.86■■□□□ 1.25
PKNOX1-204ENST00000456957 PRAM1Q96QH2 718 aa22.86■■□□□ 1.25
PKNOX1-204ENST00000456957 WAPLQ7Z5K2 1190 aa22.85■■□□□ 1.25
PKNOX1-204ENST00000456957 LRRC7Q96NW7 1537 aa22.85■■□□□ 1.25
PKNOX1-204ENST00000456957 EIF4G2P78344 907 aaKnown RBP eCLIP22.84■■□□□ 1.25
PKNOX1-204ENST00000456957 CENPJQ9HC77 1338 aaPredicted RBP22.83■■□□□ 1.25
PKNOX1-204ENST00000456957 HSPA5P11021 654 aaKnown RBP22.83■■□□□ 1.25
PKNOX1-204ENST00000456957 ADGRB2O60241 1585 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms